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Rebrov O, Poline M, Ryding MJ, Thomas RD, Uggerud E, Larsson M. Non-covalently bonded diastereomeric adducts of amino acids and (S)-1-phenylethanol in low-energy dissociative collisions. Mol Phys 2020. [DOI: 10.1080/00268976.2019.1615145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- O. Rebrov
- Department of Physics, AlbaNova University Center, Stockholm University, Stockholm, Sweden
| | - M. Poline
- Department of Physics, AlbaNova University Center, Stockholm University, Stockholm, Sweden
| | - M. J. Ryding
- Department of Chemistry and Hylleraas Centre for Quantum Molecular Sciences, University of Oslo, Oslo, Norway
| | - R. D. Thomas
- Department of Physics, AlbaNova University Center, Stockholm University, Stockholm, Sweden
| | - E. Uggerud
- Department of Chemistry and Hylleraas Centre for Quantum Molecular Sciences, University of Oslo, Oslo, Norway
| | - M. Larsson
- Department of Physics, AlbaNova University Center, Stockholm University, Stockholm, Sweden
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Hansen K, Sundén AEK, Støchkel K, Nielsen SB, Dynefors B. Non-scrambling of hydrogen in NH4+(H2O)3 clusters. RSC Adv 2019; 9:6620-6626. [PMID: 35518464 PMCID: PMC9061083 DOI: 10.1039/c8ra10515d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2018] [Accepted: 02/18/2019] [Indexed: 12/03/2022] Open
Abstract
We have measured the metastable decay of protonated, ammonia-doped, deuterated water clusters produced in an electrospray source, dn-NH4+(H2O)3, n = 0–6. The mass spectra show a very strong odd–even effect, consistent with a low degree of scrambling of the hydrogen bound to water and to the ammonia. The relative evaporation rate constant for light water was almost twice the one for heavy water, with the rate for mixed protium–deuterium water molecule intermediate between these two values. We have measured the metastable decay of protonated, ammonia-doped, deuterated water clusters produced in an electrospray source, dn-NH4+(H2O)3, n = 0–6.![]()
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Affiliation(s)
- K. Hansen
- Center for Joint Quantum Studies
- Department of Physics
- Tianjin University
- Tianjin 300072
- China
| | - A. E. K. Sundén
- Department of Physics
- University of Gothenburg
- 41296 Gothenburg
- Sweden
| | - K. Støchkel
- Department of Physics and Astronomy
- Aarhus University
- Denmark
| | | | - B. Dynefors
- Chalmers University of Technology
- 41296 Gothenburg
- Sweden
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3
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Sundén AEK, Støchkel K, Hvelplund P, Brøndsted Nielsen S, Dynefors B, Hansen K. Stabilities of protonated water-ammonia clusters. J Chem Phys 2018; 148:184306. [DOI: 10.1063/1.5023620] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Affiliation(s)
- A. E. K. Sundén
- Department of Physics, University of Gothenburg, 41296 Gothenburg, Sweden
| | - K. Støchkel
- Department of Physics and Astronomy, Aarhus University, Ny Munkegade 120, 8000 Aarhus C, Denmark
| | - P. Hvelplund
- Department of Physics and Astronomy, Aarhus University, Ny Munkegade 120, 8000 Aarhus C, Denmark
| | - S. Brøndsted Nielsen
- Department of Physics and Astronomy, Aarhus University, Ny Munkegade 120, 8000 Aarhus C, Denmark
| | - B. Dynefors
- Chalmers University of Technology, 41296 Gothenburg, Sweden
| | - K. Hansen
- Department of Physics, University of Gothenburg, 41296 Gothenburg, Sweden
- Center for Joint Quantum Studies and Department of Physics, Tianjin University, Tianjin 300072, China
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Bruzzi E, Raggi G, Parajuli R, Stace AJ. Experimental Binding Energies for the Metal Complexes [Mg(NH3)n]2+, [Ca(NH3)n]2+, and [Sr(NH3)n]2+ for n = 4–20 Determined from Kinetic Energy Release Measurements. J Phys Chem A 2014; 118:8525-32. [DOI: 10.1021/jp5022642] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- E. Bruzzi
- Department
of Physical and Theoretical Chemistry, School of Chemistry, University of Nottingham, University Park, Nottingham NG7 2RD, U.K
| | - G. Raggi
- Department
of Physical and Theoretical Chemistry, School of Chemistry, University of Nottingham, University Park, Nottingham NG7 2RD, U.K
| | - R. Parajuli
- Department
of Physics, Amrit Campus, Tribhuvan University, Kathmandu, Nepal
| | - A. J. Stace
- Department
of Physical and Theoretical Chemistry, School of Chemistry, University of Nottingham, University Park, Nottingham NG7 2RD, U.K
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7
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Lengyel J, Pysanenko A, Poterya V, Slavíček P, Fárník M, Kočišek J, Fedor J. Irregular shapes of water clusters generated in supersonic expansions. PHYSICAL REVIEW LETTERS 2014; 112:113401. [PMID: 24702366 DOI: 10.1103/physrevlett.112.113401] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2013] [Indexed: 05/26/2023]
Abstract
We report cross sections for pickup of guest molecules on neutral argon and water clusters with the mean sizes in the range from N = 50 to 600. The experiments are supported by molecular dynamics simulations and analytical models based on the interaction potentials. The cross sections for argon clusters are consistent with their assumed spherical shape and follow approximately the theoretically justified N(1/3) dependence. On the other hand, the cross sections of water clusters depart from this dependence and are considerably larger starting from N ≥ 300. We interpret this increase of cross section by the occurrence of highly irregular shapes of water clusters produced in the supersonic expansion of water vapor under the conditions of the large cluster generation.
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Affiliation(s)
- J Lengyel
- J. Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - A Pysanenko
- J. Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - V Poterya
- J. Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - P Slavíček
- J. Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - M Fárník
- J. Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - J Kočišek
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700 Fribourg, Switzerland
| | - J Fedor
- Department of Chemistry, University of Fribourg, Chemin du Musée 9, CH-1700 Fribourg, Switzerland
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Zamith S, Labastie P, L’Hermite JM. Heat capacities of mass selected deprotonated water clusters. J Chem Phys 2013; 138:034304. [DOI: 10.1063/1.4774408] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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9
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Rybkin VV, Simakov AO, Bakken V, Reine S, Kjaergaard T, Helgaker T, Uggerud E. Insights into the dynamics of evaporation and proton migration in protonated water clusters from large-scale Born-Oppenheimer direct dynamics. J Comput Chem 2012; 34:533-44. [PMID: 23108605 DOI: 10.1002/jcc.23162] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2012] [Revised: 09/24/2012] [Accepted: 09/28/2012] [Indexed: 12/23/2022]
Abstract
Large-scale on-the-fly Born-Oppenheimer molecular dynamics simulations using recent advances in linear scaling electronic structure theory and trajectory integration techniques have been performed for protonated water clusters around the magic number (H(2)O)(n)H(+) , for n = 20 and 21. Besides demonstrating the feasibility and efficiency of the computational approach, the calculations reveal interesting dynamical details. Elimination of water molecules is found to be fast for both cluster sizes but rather insensitive to the initial geometry. The water molecules released acquire velocities compatible with thermal energies. The proton solvation shell changes between the well-known Eigen and Zundel motifs and is characterized by specific low-frequency vibrational modes, which have been quantified. The proton transfer mechanism largely resembles that of bulk water but one interesting variation was observed.
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Affiliation(s)
- Vladimir V Rybkin
- The Department of Chemistry, Centre for Theoretical and Computational Chemistry (CTCC), University of Oslo, Postboks 1033, Blindern 0315, Oslo, Norway.
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Schmidt M, von Issendorff B. Gas-phase calorimetry of protonated water clusters. J Chem Phys 2012; 136:164307. [PMID: 22559482 DOI: 10.1063/1.4705266] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Protonated water clusters with 60 to 79 molecules have been studied by nanocalorimetry. The technique is based on multi-collision excitations of the accelerated clusters with helium. The caloric curves indicate transitions that resemble those of water clusters charged by an excess electron, but the transition temperatures of the protonated clusters are higher.
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Affiliation(s)
- M Schmidt
- Laboratoire Aimé Cotton, CNRS, Bât 505, Université Paris Sud, 91405 Orsay Cedex, France
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Zamith S, Labastie P, L'Hermite JM. Fragmentation cross sections of protonated water clusters. J Chem Phys 2012; 136:214301. [DOI: 10.1063/1.4722886] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
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Kanev IL, Balabaev NK, Glyakina AV, Morozov VN. Computer Simulation of Gas-Phase Neutralization of Electrospray-Generated Protein Macroions. J Phys Chem B 2012; 116:5872-81. [DOI: 10.1021/jp300370r] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Igor L. Kanev
- Institute of Theoretical and
Experimental Biophysics, Russian Academy of Sciences, Pushchino, Moscow Region, Russia 142290
| | - Nikolay K. Balabaev
- Institute of Mathematical Problems
of Biology, Russian Academy of Sciences, Pushchino, Moscow Region, Russia 142290
- Department of Bioengineering,
Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia 119991
| | - Anna V. Glyakina
- Institute of Mathematical Problems
of Biology, Russian Academy of Sciences, Pushchino, Moscow Region, Russia 142290
| | - Victor N. Morozov
- Institute of Theoretical and
Experimental Biophysics, Russian Academy of Sciences, Pushchino, Moscow Region, Russia 142290
- The National Center for Biodefense
and Infectious Diseases, George Mason University, Manassas, Virginia 20110, United States
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Young RM, Yandell MA, King SB, Neumark DM. Thermal effects on energetics and dynamics in water cluster anions (H2O)n−. J Chem Phys 2012; 136:094304. [DOI: 10.1063/1.3689439] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Holden GL, Freeman DL. Monte Carlo Investigation of the Thermodynamic Properties of (H2O)n and (H2O)nH2 (n = 2−20) Clusters. J Phys Chem B 2011; 115:4725-44. [DOI: 10.1021/jp201082p] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Glen L. Holden
- Department of Chemistry, University of Rhode Island, Kingston, Rhode Island 02881, United States
| | - David L. Freeman
- Department of Chemistry, University of Rhode Island, Kingston, Rhode Island 02881, United States
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Ryding MJ, Zatula AS, Andersson PU, Uggerud E. Isotope exchange in reactions between D2O and size-selected ionic water clusters containing pyridine, H+(pyridine)m(H2O)n. Phys Chem Chem Phys 2011; 13:1356-67. [DOI: 10.1039/c0cp00416b] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Donald WA, Leib RD, Demireva M, Negru B, Neumark DM, Williams ER. Average sequential water molecule binding enthalpies of M(H2O)(19-124)2+ (M = Co, Fe, Mn, and Cu) measured with ultraviolet photodissociation at 193 and 248 nm. J Phys Chem A 2010; 115:2-12. [PMID: 21142113 DOI: 10.1021/jp107547r] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The average sequential water molecule binding enthalpies to large water clusters (between 19 and 124 water molecules) containing divalent ions were obtained by measuring the average number of water molecules lost upon absorption of an UV photon (193 or 248 nm) and using a statistical model to account for the energy released into translations, rotations, and vibrations of the products. These values agree well with the trend established by more conventional methods for obtaining sequential binding enthalpies to much smaller hydrated divalent ions. The average binding enthalpies decrease to a value of ~10.4 kcal/mol for n > ~40 and are insensitive to the ion identity at large cluster size. This value is close to that of the bulk heat of vaporization of water (10.6 kcal/mol) and indicates that the structure of water in these clusters may more closely resemble that of bulk liquid water than ice, owing either to a freezing point depression or rapid evaporative cooling and kinetic trapping of the initial liquid droplet. A discrete implementation of the Thomson equation using parameters for liquid water at 0 °C generally fits the trend in these data but provides values that are ~0.5 kcal/mol too low.
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Affiliation(s)
- William A Donald
- Department of Chemistry, University of California, Berkeley, California 94720-1460, USA
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Hvelplund P, Kurtén T, Støchkel K, Ryding MJ, Nielsen SB, Uggerud E. Stability and Structure of Protonated Clusters of Ammonia and Water, H+(NH3)m (H2O)n. J Phys Chem A 2010; 114:7301-10. [DOI: 10.1021/jp104162k] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Preben Hvelplund
- Department of Physics and Astronomy, Aarhus University, Ny Munkegade, Bld. 1520, DK-8000 Aarhus C, Denmark, Department of Physical Sciences, University of Helsinki, P.O. Box 64, FIN-00014 University of Helsinki, Finland, Department of Chemistry, H. C. Ørsted Institute, University of Copenhagen, Denmark, Department of Chemistry, Atmospheric Science, University of Gothenburg, SE-412 96 Göteborg, Sweden, and Mass Spectrometry Laboratory and The Centre for Theoretical and Computational Chemistry, Department
| | - Theo Kurtén
- Department of Physics and Astronomy, Aarhus University, Ny Munkegade, Bld. 1520, DK-8000 Aarhus C, Denmark, Department of Physical Sciences, University of Helsinki, P.O. Box 64, FIN-00014 University of Helsinki, Finland, Department of Chemistry, H. C. Ørsted Institute, University of Copenhagen, Denmark, Department of Chemistry, Atmospheric Science, University of Gothenburg, SE-412 96 Göteborg, Sweden, and Mass Spectrometry Laboratory and The Centre for Theoretical and Computational Chemistry, Department
| | - Kristian Støchkel
- Department of Physics and Astronomy, Aarhus University, Ny Munkegade, Bld. 1520, DK-8000 Aarhus C, Denmark, Department of Physical Sciences, University of Helsinki, P.O. Box 64, FIN-00014 University of Helsinki, Finland, Department of Chemistry, H. C. Ørsted Institute, University of Copenhagen, Denmark, Department of Chemistry, Atmospheric Science, University of Gothenburg, SE-412 96 Göteborg, Sweden, and Mass Spectrometry Laboratory and The Centre for Theoretical and Computational Chemistry, Department
| | - Mauritz Johan Ryding
- Department of Physics and Astronomy, Aarhus University, Ny Munkegade, Bld. 1520, DK-8000 Aarhus C, Denmark, Department of Physical Sciences, University of Helsinki, P.O. Box 64, FIN-00014 University of Helsinki, Finland, Department of Chemistry, H. C. Ørsted Institute, University of Copenhagen, Denmark, Department of Chemistry, Atmospheric Science, University of Gothenburg, SE-412 96 Göteborg, Sweden, and Mass Spectrometry Laboratory and The Centre for Theoretical and Computational Chemistry, Department
| | - Steen Brøndsted Nielsen
- Department of Physics and Astronomy, Aarhus University, Ny Munkegade, Bld. 1520, DK-8000 Aarhus C, Denmark, Department of Physical Sciences, University of Helsinki, P.O. Box 64, FIN-00014 University of Helsinki, Finland, Department of Chemistry, H. C. Ørsted Institute, University of Copenhagen, Denmark, Department of Chemistry, Atmospheric Science, University of Gothenburg, SE-412 96 Göteborg, Sweden, and Mass Spectrometry Laboratory and The Centre for Theoretical and Computational Chemistry, Department
| | - Einar Uggerud
- Department of Physics and Astronomy, Aarhus University, Ny Munkegade, Bld. 1520, DK-8000 Aarhus C, Denmark, Department of Physical Sciences, University of Helsinki, P.O. Box 64, FIN-00014 University of Helsinki, Finland, Department of Chemistry, H. C. Ørsted Institute, University of Copenhagen, Denmark, Department of Chemistry, Atmospheric Science, University of Gothenburg, SE-412 96 Göteborg, Sweden, and Mass Spectrometry Laboratory and The Centre for Theoretical and Computational Chemistry, Department
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Hansen K, Andersson PU, Uggerud E. Activation energies for evaporation from protonated and deprotonated water clusters from mass spectra. J Chem Phys 2009; 131:124303. [DOI: 10.1063/1.3230111] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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