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Tercanlı MF, Olcay AB, Mutlu O, Bilgin C, Hakyemez B. Investigation of the effect of anticoagulant usage in the flow diverter stent treatment of the patient-specific cerebral aneurysm using the Lagrangian coherent structures. J Clin Neurosci 2021; 94:86-93. [PMID: 34863468 DOI: 10.1016/j.jocn.2021.10.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2020] [Revised: 08/13/2021] [Accepted: 10/05/2021] [Indexed: 10/20/2022]
Abstract
Anticoagulants are prescribed to the flow diverter treated patients to diminish the risk of embolism in the arteries. In the present study, digital subtraction angiography images of a 49-year-old female patient with a left paraophthalmic aneurysm were used to build a numerical model to investigate the effect of an anticoagulant on hemodynamics at the aneurysm site. The Carreau-Yasuda viscosity model was utilized to define blood viscosity, and the coefficients of the viscosity model were updated based on the usage of warfarin. The five-cardiac cycle-long numerical simulations were performed, and Lagrangian coherent structures, hyperbolic time, and fluid particle analyses were also employed in the numerical models. These analyses allowed us to evaluate the formation of stagnated regions, recirculation zones, and the number of jailed particles inside the aneurysm sac following a flow diverter placement. It is realized that anticoagulant use caused blood to be less viscous, yielding a substantial amount of incoming blood flow to enter the aneurysm sac. Only 12% of the nearly 25,000 fluid particles seeded from the artery inlet have stayed inside the sac. Furthermore, the deviation between warfarin added blood and normal blood flow becomes more extensive, with every heartbeat undermining the effectiveness of patient-specific CFD models when the use of anticoagulants is overlooked in the viscosity models.
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Affiliation(s)
| | - Ali Bahadır Olcay
- Yeditepe University, Faculty of Engineering, Department of Mechanical Engineering, Kayisdagi Cad., 34755 Istanbul, Turkey.
| | - Onur Mutlu
- Biomedical Research Center, Qatar University, Doha P.O. Box 2713, Qatar
| | - Cem Bilgin
- University of Health Sciences, Bursa Yuksek Ihtisas Training and Research Hospital, Department of Radiology, Yildirim, Bursa 16310, Turkey
| | - Bahattin Hakyemez
- Uludag University School of Medicine, Department of Radiology, Gorukle, Bursa 16059, Turkey
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Fluid Flow Characteristics of Healthy and Calcified Aortic Valves Using Three-Dimensional Lagrangian Coherent Structures Analysis. FLUIDS 2021. [DOI: 10.3390/fluids6060203] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Aortic valve calcification is an important cardiovascular disorder that deteriorates the accurate functioning of the valve leaflets. The increasing stiffness due to the calcification prevents the complete closure of the valve and therefore leads to significant hemodynamic alterations. Computational fluid dynamics (CFD) modeling enables the investigation of the entire flow domain by processing medical images from aortic valve patients. In this study, we computationally modeled and simulated a 3D aortic valve using patient-specific dimensions of the aortic root and aortic sinus. Leaflet stiffness is deteriorated in aortic valve disease due to calcification. In order to investigate the influence of leaflet calcification on flow dynamics, three different leaflet-stiffness values were considered for healthy, mildly calcified, and severely calcified leaflets. Time-dependent CFD results were used for applying the Lagrangian coherent structures (LCS) technique by performing finite-time Lyapunov exponent (FTLE) computations along with Lagrangian particle residence time (PRT) analysis to identify unique vortex structures at the front and backside of the leaflets. Obtained results indicated that the peak flow velocity at the valve orifice increased with the calcification rate. For the healthy aortic valve, a low-pressure field was observed at the leaflet tips. This low-pressure field gradually expanded through the entire aortic sinus as the calcification level increased. FTLE field plots of the healthy and calcified valves showed a variety of differences in terms of flow structures. When the number of fluid particles in the healthy valve model was taken as reference, 1.59 and 1.74 times more particles accumulated in the mildly and severely calcified valves, respectively, indicating that the calcified valves were not sufficiently opened to allow normal mass flow rates.
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Zhu XZ, Tong Y, Hu YX. Chaotic Manifold Analysis of Four-Screw Extruders Based on Lagrangian Coherent Structures. MATERIALS 2018; 11:ma11112272. [PMID: 30441795 PMCID: PMC6266663 DOI: 10.3390/ma11112272] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/14/2018] [Revised: 11/04/2018] [Accepted: 11/09/2018] [Indexed: 11/16/2022]
Abstract
The four-screw extruder (FSE) is a novel equipment for polymer processing. In this paper, from a new viewpoint of Lagrangian coherent structures (LCS), two-dimensional fluid transport and chaotic mixing characteristics within three kinds of novel industrial FSEs are explored based on LCS to better understand the flow and mixing natures in the FSEs. Firstly, based on the finite-time invariant manifold theory, the finite-time Lyapunov exponent (FTLE) and LCS of FSEs are calculated by considering the different initial time. Hyperbolic LCSs from the FTLE maps are adopted to identify chaotic mixing manifolds in FSEs. Moreover, particle tracking and Poincaré sections are used to illustrate the different fluid motions in the above three isolated regions. Finally, the effects of relative rotating directions and layout of four screws on the chaotic manifolds in FESs are discussed in order to enhance local mixing performance. Furthermore, quantitative mixing measures, such as the segregation scale, logarithmic of stretching, and mean-time mixing efficiency are employed to compare the mixing efficiencies in three kinds of FSEs. The results show that the relative rotating directions and positions of four screws can change the chaotic manifolds and increase mixing performance in local poor mixing regions. FTLE and LCS analysis are helpful to better understand the chaotic mixing nature in the novel screw extruders.
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Affiliation(s)
- Xiang Zhe Zhu
- School of Mechanical Engineering, Liaoning Shihua University, Fushun 113001, China.
| | - Ying Tong
- School of Mechanical Engineering, Liaoning Shihua University, Fushun 113001, China.
| | - Yue Xin Hu
- School of Chemistry and Materials Science, Liaoning Shihua University, Fushun 113001, China.
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Hadjighasem A, Farazmand M, Blazevski D, Froyland G, Haller G. A critical comparison of Lagrangian methods for coherent structure detection. CHAOS (WOODBURY, N.Y.) 2017; 27:053104. [PMID: 28576102 DOI: 10.1063/1.4982720] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
We review and test twelve different approaches to the detection of finite-time coherent material structures in two-dimensional, temporally aperiodic flows. We consider both mathematical methods and diagnostic scalar fields, comparing their performance on three benchmark examples: the quasiperiodically forced Bickley jet, a two-dimensional turbulence simulation, and an observational wind velocity field from Jupiter's atmosphere. A close inspection of the results reveals that the various methods often produce very different predictions for coherent structures, once they are evaluated beyond heuristic visual assessment. As we find by passive advection of the coherent set candidates, false positives and negatives can be produced even by some of the mathematically justified methods due to the ineffectiveness of their underlying coherence principles in certain flow configurations. We summarize the inferred strengths and weaknesses of each method, and make general recommendations for minimal self-consistency requirements that any Lagrangian coherence detection technique should satisfy.
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Affiliation(s)
- Alireza Hadjighasem
- Department of Mechanical Engineering, MIT, 77 Massachusetts Ave., Cambridge, Massachusetts 02139, USA
| | - Mohammad Farazmand
- Department of Mechanical Engineering, MIT, 77 Massachusetts Ave., Cambridge, Massachusetts 02139, USA
| | - Daniel Blazevski
- Insight Data Science, 45W 25th St., New York, New York 10010, USA
| | - Gary Froyland
- School of Mathematics and Statistics, University of New South Wales, Sydney, NSW 2052, Australia
| | - George Haller
- Department of Mechanical and Process Engineering, Institute of Mechanical Systems, ETH Zürich, Leonhardstrasse 21, 8092 Zürich, Switzerland
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González DR, Speth RL, Gaitonde DV, Lewis MJ. Finite-time Lyapunov exponent-based analysis for compressible flows. CHAOS (WOODBURY, N.Y.) 2016; 26:083112. [PMID: 27586608 DOI: 10.1063/1.4961066] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
The finite-time Lyapunov exponent (FTLE) technique has shown substantial success in analyzing incompressible flows by capturing the dynamics of coherent structures. Recent applications include river and ocean flow patterns, respiratory tract dynamics, and bio-inspired propulsors. In the present work, we extend FTLE to the compressible flow regime so that coherent structures, which travel at convective speeds, can be associated with waves traveling at acoustic speeds. This is particularly helpful in the study of jet acoustics. We first show that with a suitable choice of integration time interval, FTLE can extract wave dynamics from the velocity field. The integration time thus acts as a pseudo-filter separating coherent structures from waves. Results are confirmed by examining forward and backward FTLE coefficients for several simple, well-known acoustic fields. Next, we use this analysis to identify events associated with intermittency in jet noise pressure probe data. Although intermittent events are known to be dominant causes of jet noise, their direct source in the turbulent jet flow has remained unexplained. To this end, a Large-Eddy Simulation of a Mach 0.9 jet is subjected to FTLE to simultaneously examine, and thus expose, the causal relationship between coherent structures and the corresponding acoustic waves. Results show that intermittent events are associated with entrainment in the initial roll up region and emissive events downstream of the potential-core collapse. Instantaneous acoustic disturbances are observed to be primarily induced near the collapse of the potential core and continue propagating towards the far-field at the experimentally observed, approximately 30° angle relative to the jet axis.
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Affiliation(s)
- D R González
- Naval Surface Warfare Center IHEODTD, Indian Head, Maryland 20640-5035, USA
| | - R L Speth
- Mechanical and Aerospace Engineering Department, The Ohio State University, Columbus, Ohio 43210, USA
| | - D V Gaitonde
- Mechanical and Aerospace Engineering Department, The Ohio State University, Columbus, Ohio 43210, USA
| | - M J Lewis
- Institute for Defense Analyses, Washington, DC 20006, USA
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Allshouse MR, Peacock T. Lagrangian based methods for coherent structure detection. CHAOS (WOODBURY, N.Y.) 2015; 25:097617. [PMID: 26428570 DOI: 10.1063/1.4922968] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
There has been a proliferation in the development of Lagrangian analytical methods for detecting coherent structures in fluid flow transport, yielding a variety of qualitatively different approaches. We present a review of four approaches and demonstrate the utility of these methods via their application to the same sample analytic model, the canonical double-gyre flow, highlighting the pros and cons of each approach. Two of the methods, the geometric and probabilistic approaches, are well established and require velocity field data over the time interval of interest to identify particularly important material lines and surfaces, and influential regions, respectively. The other two approaches, implementing tools from cluster and braid theory, seek coherent structures based on limited trajectory data, attempting to partition the flow transport into distinct regions. All four of these approaches share the common trait that they are objective methods, meaning that their results do not depend on the frame of reference used. For each method, we also present a number of example applications ranging from blood flow and chemical reactions to ocean and atmospheric flows.
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Affiliation(s)
- Michael R Allshouse
- Center for Nonlinear Dynamics and Department of Physics, University of Texas at Austin, Austin, Texas 78712, USA
| | - Thomas Peacock
- Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
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Tauro F, Grimaldi S, Porfiri M. Unraveling flow patterns through nonlinear manifold learning. PLoS One 2014; 9:e91131. [PMID: 24614890 PMCID: PMC3948738 DOI: 10.1371/journal.pone.0091131] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2013] [Accepted: 02/09/2014] [Indexed: 11/18/2022] Open
Abstract
From climatology to biofluidics, the characterization of complex flows relies on computationally expensive kinematic and kinetic measurements. In addition, such big data are difficult to handle in real time, thereby hampering advancements in the area of flow control and distributed sensing. Here, we propose a novel framework for unsupervised characterization of flow patterns through nonlinear manifold learning. Specifically, we apply the isometric feature mapping (Isomap) to experimental video data of the wake past a circular cylinder from steady to turbulent flows. Without direct velocity measurements, we show that manifold topology is intrinsically related to flow regime and that Isomap global coordinates can unravel salient flow features.
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Affiliation(s)
- Flavia Tauro
- Department of Mechanical and Aerospace Engineering, New York University Polytechnic School of Engineering, Brooklyn, New York, United States of America
- Dipartimento di Ingegneria Civile, Edile e Ambientale, Sapienza University of Rome, Rome, Italy
| | - Salvatore Grimaldi
- Department of Mechanical and Aerospace Engineering, New York University Polytechnic School of Engineering, Brooklyn, New York, United States of America
- Dipartimento per l’Innovazione nei Sistemi Biologici, Agroalimentari e Forestali, University of Tuscia, Viterbo, Italy
| | - Maurizio Porfiri
- Department of Mechanical and Aerospace Engineering, New York University Polytechnic School of Engineering, Brooklyn, New York, United States of America
- * E-mail:
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Leung S. The backward phase flow method for the Eulerian finite time Lyapunov exponent computations. CHAOS (WOODBURY, N.Y.) 2013; 23:043132. [PMID: 24387571 DOI: 10.1063/1.4847175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
We propose a simple Eulerian approach to compute the moderate to long time flow map for approximating the Lyapunov exponent of a (periodic or aperiodic) dynamical system. The idea is to generalize a recently proposed backward phase flow method which is specially designed for long time level set propagation. Unlike the original phase flow method or the backward phase flow method, which is applicable only to autonomous systems, the current approach can also be applied to any time-dependent (periodic or aperiodic) flow. We will discuss the stability of the proposed method. Numerical examples will be given to demonstrate the effectiveness of the algorithm.
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Affiliation(s)
- Shingyu Leung
- Department of Mathematics, Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong
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O'Farrell C, Dabiri JO. A Lagrangian approach to identifying vortex pinch-off. CHAOS (WOODBURY, N.Y.) 2010; 20:017513. [PMID: 20370303 DOI: 10.1063/1.3275499] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
A criterion for identifying vortex ring pinch-off based on the Lagrangian coherent structures (LCSs) in the flow is proposed and demonstrated for a piston-cylinder arrangement with a piston stroke to diameter (L/D) ratio of approximately 12. It is found that the appearance of a new disconnected LCS and the termination of the original LCS are indicative of the initiation of vortex pinch-off. The subsequent growth of new LCSs, which tend to roll into spirals, indicates the formation of new vortex cores in the trailing shear layer. Using this criterion, the formation number is found to be 4.1+/-0.1, which is consistent with the predicted formation number of approximately 4 of Gharib et al. [Gharib et al. J. Fluid Mech. 360, 121 (1998)]. The results obtained using the proposed LCS criterion are compared with those obtained using the circulation criterion of Gharib et al. and are found to be in excellent agreement. The LCS approach is also compared against other metrics, both Lagrangian and Eulerian, and is found to yield insight into the pinch-off process that these do not. Furthermore, the LCS analysis reveals a consistent pattern of coalescing or "pairing" of adjacent vortices in the trailing shear layer, a process which has been extensively documented in circular jets. Given that LCSs are objective and insensitive to local errors in the velocity field, the proposed criterion has the potential to be a robust tool for pinch-off identification. In particular, it may prove useful in the study of unsteady and low Reynolds number flows, where conventional methods based on vorticity prove difficult to use.
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Affiliation(s)
- Clara O'Farrell
- Control and Dynamical Systems, California Institute of Technology, Pasadena, California 91125, USA
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Peacock T, Dabiri J. Introduction to Focus Issue: Lagrangian Coherent Structures. CHAOS (WOODBURY, N.Y.) 2010; 20:017501. [PMID: 20370291 DOI: 10.1063/1.3278173] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
The topic of Lagrangian coherent structures (LCS) has been a rapidly growing area of research in nonlinear dynamics for almost a decade. It provides a means to rigorously define and detect transport barriers in dynamical systems with arbitrary time dependence and has a wealth of applications, particularly to fluid flow problems. Here, we give a short introduction to the topic of LCS and review the new work presented in this Focus Issue.
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Affiliation(s)
- Thomas Peacock
- Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
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