1
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Sutton P, Saunier J, Lao KU, El-Shall MS. Sequential Reactions of Acetylene with the Benzonitrile Radical Cation: New Insights into Structures and Rate Coefficients of the Covalent Ion Products. J Phys Chem Lett 2024:11067-11076. [PMID: 39471052 DOI: 10.1021/acs.jpclett.4c02496] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2024]
Abstract
Benzonitrile radical cations generated in ionizing environments such as solar nebulae and interstellar clouds can react with neutral molecules such as acetylene to form a variety of nitrogen-containing complex organics. Herein, we present results from mass-selected ion mobility experiments and coupled-cluster and DFT calculations for the sequential reactions of acetylene with the benzonitrile radical cation (C7NH5+•). The results reveal the formation of two covalently bonded adduct ions C9NH7+• and C11NH9+• with individual rate coefficients of 2.1(±0.4) × 10-11 cm3 s-1 and 1.1(±0.9) × 10-11 cm3 s-1, respectively measured at 334.5 K. The direct addition of acetylene onto the N atom of the benzonitrile cation results in the formation of a N-acetylene-benzonitrile+• radical cation with a calculated collision cross-section of 67.5 Å2 in perfect agreement with the measured cross-section of 67.5 Å2 of the C9NH7+• adduct. The measured collision cross-section of the second covalent adduct C11NH9+• (72.2 Å2) is also in excellent agreement with the calculated cross-section (71.2 Å2) of the lowest energy isomer of the C11NH9+• ion corresponding to the 2-phenylpyridine structure. The formation of the bicyclic 2-phenylpyridine radical cation is explained by the rapid conversion of the classical radical cation C11NH9+• into a distonic ion structure that can efficiently cyclize in an exothermic transformation to form the 2-phenylpyridine radical cation. This intriguing mechanism could explain the formation of N-containing complex organics in different regions of outer space. The current results are expected to have direct implications for the search for nitrogen-containing complex organics in space.
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Affiliation(s)
- Paige Sutton
- Department of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284-2006, United States
| | - John Saunier
- Department of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284-2006, United States
| | - Ka Un Lao
- Department of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284-2006, United States
| | - M Samy El-Shall
- Department of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284-2006, United States
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2
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Borissov A, Chmielewski PJ, Gómez García CJ, Lis T, Stępień M. Dinor[7]helicene and Beyond: Divergent Synthesis of Chiral Diradicaloids with Variable Open-Shell Character. Angew Chem Int Ed Engl 2023; 62:e202309238. [PMID: 37452009 DOI: 10.1002/anie.202309238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 07/13/2023] [Accepted: 07/14/2023] [Indexed: 07/18/2023]
Abstract
Diradicaloid helicenes constructed formally by non-benzenoid double π-extension of phenanthrene were synthesized by a common strategy involving double electrophilic benzannulation. Steric effects in the second benzannulation step led to considerable structural diversity among the products, yielding a symmetrical dinor[7]helicene 1 and two isomeric unsymmetrical double helicenes 2 and 3, containing a nor[5]helicene and [4]helicene fragment, respectively, in addition to a common nor[6]helicene motif. Geometries, configurational dynamics, and electronic structure of these helicenes were analyzed using solid-state structures, spectroscopic methods, and computational analyses. The open-shell character of the singlet states of these helicenes increases in the order 3<1<2, with strongly varying diradicaloid indexes and singlet-triplet gaps. Compounds 1-3 displayed narrow optical gaps of 0.79-1.25 eV, resulting in significant absorption in the near infrared (NIR) region. They also exhibit reversible redox chemistry, each of them yielding stable radical cations, radical anions, and dianions, in some cases possessing intense NIR absorptions extending beyond 2500 nm.
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Affiliation(s)
- Arseni Borissov
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland
| | - Piotr J Chmielewski
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland
| | - Carlos J Gómez García
- Institute of Molecular Science, University of Valencia, C/José Beltrán, 2, 46980, Paterna, Valencia, Spain
| | - Tadeusz Lis
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland
| | - Marcin Stępień
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland
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3
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Peverati R, Platt SP, Attah IK, Aziz SG, El-Shall MS, Head-Gordon M. Nucleophilic Aromatic Addition in Ionizing Environments: Observation and Analysis of New C–N Valence Bonds in Complexes between Naphthalene Radical Cation and Pyridine. J Am Chem Soc 2017; 139:11923-11932. [PMID: 28759221 DOI: 10.1021/jacs.7b05756] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Roberto Peverati
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Sean P. Platt
- Department
of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284, United States
| | - Isaac K. Attah
- Department
of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284, United States
| | - Saaudallah G. Aziz
- Department
of Chemistry, Faculty of Science, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - M. Samy El-Shall
- Department
of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284, United States
| | - Martin Head-Gordon
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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4
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Attah IK, Soliman AR, Platt SP, Meot-Ner (Mautner) M, Aziz SG, Samy El-Shall M. Observation of covalent and electrostatic bonds in nitrogen-containing polycyclic ions formed by gas phase reactions of the benzene radical cation with pyrimidine. Phys Chem Chem Phys 2017; 19:6422-6432. [DOI: 10.1039/c6cp08731k] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This work reports a new formation mechanism for the nitrogen-containing polycyclic ions in the gas phase.
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Affiliation(s)
| | | | - Sean P. Platt
- Department of Chemistry
- Virginia Commonwealth University
- Richmond
- USA
| | | | | | - M. Samy El-Shall
- Department of Chemistry
- Virginia Commonwealth University
- Richmond
- USA
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5
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Delaunay R, Gatchell M, Rousseau P, Domaracka A, Maclot S, Wang Y, Stockett MH, Chen T, Adoui L, Alcamí M, Martín F, Zettergren H, Cederquist H, Huber BA. Molecular Growth Inside of Polycyclic Aromatic Hydrocarbon Clusters Induced by Ion Collisions. J Phys Chem Lett 2015; 6:1536-42. [PMID: 26263308 DOI: 10.1021/acs.jpclett.5b00405] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
The present work combines experimental and theoretical studies of the collision between keV ion projectiles and clusters of pyrene, one of the simplest polycyclic aromatic hydrocarbons (PAHs). Intracluster growth processes induced by ion collisions lead to the formation of a wide range of new molecules with masses larger than that of the pyrene molecule. The efficiency of these processes is found to strongly depend on the mass and velocity of the incoming projectile. Classical molecular dynamics simulations of the entire collision process-from the ion impact (nuclear scattering) to the formation of new molecular species-reproduce the essential features of the measured molecular growth process and also yield estimates of the related absolute cross sections. More elaborate density functional tight binding calculations yield the same growth products as the classical simulations. The present results could be relevant to understand the physical chemistry of the PAH-rich upper atmosphere of Saturn's moon Titan.
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Affiliation(s)
- Rudy Delaunay
- †CIMAP (UMR6252 CEA/CNRS/Ensicaen/Unicaen), Bd Henri Becquerel, BP 5133, 14070 Caen cedex 5, France
- ‡Université de Caen Basse-Normandie, Esplanade de la Paix, CS 14032, 14032 Caen cedex 5, France
| | - Michael Gatchell
- ¶Department of Physics, Stockholm University, AlbaNova University Center, S-10691 Stockholm, Sweden
| | - Patrick Rousseau
- †CIMAP (UMR6252 CEA/CNRS/Ensicaen/Unicaen), Bd Henri Becquerel, BP 5133, 14070 Caen cedex 5, France
- ‡Université de Caen Basse-Normandie, Esplanade de la Paix, CS 14032, 14032 Caen cedex 5, France
| | - Alicja Domaracka
- †CIMAP (UMR6252 CEA/CNRS/Ensicaen/Unicaen), Bd Henri Becquerel, BP 5133, 14070 Caen cedex 5, France
| | - Sylvain Maclot
- †CIMAP (UMR6252 CEA/CNRS/Ensicaen/Unicaen), Bd Henri Becquerel, BP 5133, 14070 Caen cedex 5, France
- ‡Université de Caen Basse-Normandie, Esplanade de la Paix, CS 14032, 14032 Caen cedex 5, France
| | - Yang Wang
- ∥Instituto Madrileño de Estudios Avanzados en Nanociencias (IMDEA-Nanociencia), Cantoblanco, 28049 Madrid, Spain
| | - Mark H Stockett
- ¶Department of Physics, Stockholm University, AlbaNova University Center, S-10691 Stockholm, Sweden
| | - Tao Chen
- ¶Department of Physics, Stockholm University, AlbaNova University Center, S-10691 Stockholm, Sweden
| | - Lamri Adoui
- †CIMAP (UMR6252 CEA/CNRS/Ensicaen/Unicaen), Bd Henri Becquerel, BP 5133, 14070 Caen cedex 5, France
- ‡Université de Caen Basse-Normandie, Esplanade de la Paix, CS 14032, 14032 Caen cedex 5, France
| | - Manuel Alcamí
- ∥Instituto Madrileño de Estudios Avanzados en Nanociencias (IMDEA-Nanociencia), Cantoblanco, 28049 Madrid, Spain
| | - Fernando Martín
- ∥Instituto Madrileño de Estudios Avanzados en Nanociencias (IMDEA-Nanociencia), Cantoblanco, 28049 Madrid, Spain
| | - Henning Zettergren
- ¶Department of Physics, Stockholm University, AlbaNova University Center, S-10691 Stockholm, Sweden
| | - Henrik Cederquist
- ¶Department of Physics, Stockholm University, AlbaNova University Center, S-10691 Stockholm, Sweden
| | - Bernd A Huber
- †CIMAP (UMR6252 CEA/CNRS/Ensicaen/Unicaen), Bd Henri Becquerel, BP 5133, 14070 Caen cedex 5, France
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6
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Momoh PO, Attah IK, El-Shall MS, Kanters RPF, Pinski JM, Abrash SA. Formation of covalently bonded polycyclic hydrocarbon ions by intracluster polymerization of ionized ethynylbenzene clusters. J Phys Chem A 2014; 118:8251-63. [PMID: 24689826 DOI: 10.1021/jp5010488] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Here we report a detailed study aimed at elucidating the mechanism of intracluster ionic polymerization following the electron impact ionization of van der Waals clusters of ethynylbenzene (C8H6)n generated by a supersonic beam expansion. The structures of the C16H12, C24H18, C32H24, C40H30, and C48H36 radical cations resulting from the intracluster ion-molecule addition reactions have been investigated using a combination of mass-selected ion dissociation and ion mobility measurements coupled with theoretical calculations. Noncovalent structures can be totally excluded primarily because the measured fragmentations cannot result from noncovalent structures, and partially because of the large difference between the measured collision cross sections and the calculated values corresponding to noncovalent ion-neutral complexes. All the mass-selected cluster ions show characteristic fragmentations of covalently bonded molecular ions by the loss of stable neutral fragments such as CH3, C2H, C6H5, and C7H7. The population of the C16H12 dimer ions is dominated by structural isomers of the type (C6H5)-C≡C-CH(•+)CH-(C6H5), which can grow by the sequential addition of ethynylbenzene molecules, in addition to some contributions from cyclic isomers such as the 1,3- or 1,4-diphenyl cyclobutadiene ions. Similarly, two major covalent isomers have been identified for the C24H18 trimer ions: one that has a blocked cyclic structure assigned to 1,2,4- or 1,3,5-triphenylbenzene cation, and a second isomer of the type (C6H5)-C≡C-C(C6H5)═CH-CH(•+)CH-(C6H5) where the covalent addition of further ethynylbenzene molecules can occur. For the larger ions such as C32H24, C40H30, and C48H36, the major isomers present involve the growing oligomer sequence (C6H5)-C≡C-[C(C6H5)═CH]n-CH(•+)CH-(C6H5) with different locations and orientations of the phenyl groups along the chain. In addition, the larger ions contain another family of structures consisting of neutral ethynylbenzene molecules associated with the blocked cyclic isomer ions such as the diphenylcyclobutadiene and triphenylbenzene cations. Low-energy dissociation channels corresponding to evaporation of ethynylbenzene molecules weakly associated with the covalent ions are observed in the large clusters in addition to the high-energy channels corresponding to fragmentation of the covalently bonded ions. However, in small clusters only high-energy dissociation channels are observed corresponding to the characteristic fragmentation of the molecular ions, thus providing structural signatures to identify the product ions and establish the mechanism of intracluster ionic polymerization.
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Affiliation(s)
- Paul O Momoh
- Department of Chemistry, Virginia Commonwealth University , Richmond, Virginia 23284-2006, United States
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7
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Aysina J, Maranzana A, Tonachini G, Tosi P, Ascenzi D. Growth of polyphenyls via ion–molecule reactions: An experimental and theoretical mechanistic study. J Chem Phys 2013; 138:204310. [DOI: 10.1063/1.4807486] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
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8
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Soliman AR, Hamid AM, Attah I, Momoh P, El-Shall MS. Formation of Nitrogen-Containing Polycyclic Cations by Gas-Phase and Intracluster Reactions of Acetylene with the Pyridinium and Pyrimidinium Ions. J Am Chem Soc 2012. [DOI: 10.1021/ja3068116] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Abdel-Rahman Soliman
- Department
of Chemistry, Virginia Commonwealth University, Richmond, Virginia
23284-2006, United States
| | - Ahmed M. Hamid
- Department
of Chemistry, Virginia Commonwealth University, Richmond, Virginia
23284-2006, United States
| | - Isaac Attah
- Department
of Chemistry, Virginia Commonwealth University, Richmond, Virginia
23284-2006, United States
| | - Paul Momoh
- Department
of Chemistry, Virginia Commonwealth University, Richmond, Virginia
23284-2006, United States
| | - M. Samy El-Shall
- Department
of Chemistry, Virginia Commonwealth University, Richmond, Virginia
23284-2006, United States
- Department of Chemistry, Faculty
of Science, King Abdulaziz University,
Jeddah 21589, Saudi Arabia
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9
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Soliman AR, Hamid AM, Momoh PO, El-Shall MS, Taylor D, Gallagher L, Abrash SA. Formation of Complex Organics in the Gas Phase by Sequential Reactions of Acetylene with the Phenylium Ion. J Phys Chem A 2012; 116:8925-33. [DOI: 10.1021/jp306046w] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Abdel-Rahman Soliman
- Department of Chemistry, Virginia Commonwealth University, Richmond,
Virginia
23284-2006, United States
| | - Ahmed M. Hamid
- Department of Chemistry, Virginia Commonwealth University, Richmond,
Virginia
23284-2006, United States
| | - Paul O. Momoh
- Department of Chemistry, Virginia Commonwealth University, Richmond,
Virginia
23284-2006, United States
| | - M. Samy El-Shall
- Department of Chemistry, Virginia Commonwealth University, Richmond,
Virginia
23284-2006, United States
| | - Danielle Taylor
- Department of Chemistry, University of Richmond, Richmond, Virginia 23173, United
States
| | - Lauren Gallagher
- Department of Chemistry, University of Richmond, Richmond, Virginia 23173, United
States
| | - Samuel A. Abrash
- Department of Chemistry, University of Richmond, Richmond, Virginia 23173, United
States
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10
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Hamid AM, Soliman AR, El-Shall MS. Stepwise Association of Hydrogen Cyanide and Acetonitrile with the Benzene Radical Cation: Structures and Binding Energies of (C6H6•+)(HCN)n, n = 1–6, and (C6H6•+)(CH3CN)n, n = 1–4, Clusters. J Phys Chem A 2012; 117:1069-78. [DOI: 10.1021/jp3039434] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Ahmed M. Hamid
- Department of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284, United States
| | - Abdel-Rahman Soliman
- Department of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284, United States
| | - M. Samy El-Shall
- Department of Chemistry, Virginia Commonwealth University, Richmond, Virginia 23284, United States
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11
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Keheyan Y, ten Kate IL. Radiolytic studies of naphthalene in the presence of water. ORIGINS LIFE EVOL B 2012; 42:179-86. [PMID: 22660983 DOI: 10.1007/s11084-012-9285-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2012] [Accepted: 03/05/2012] [Indexed: 11/27/2022]
Abstract
Naphthalene is an interesting candidate to study in the framework of organic delivery to planetary surfaces as well as in the origin of life. Additionally, naphthalene is of environmental interest, because of its chronic and acute effects on living systems, such as humans and animals (e.g. moths). Naphthalene has been well studied in both fields. In this paper we give an overview of radiolytic studies of naphthalene in the presence of both liquid water and water ice. From our review it appears that OH radicals are formed both in liquid water and in interstellar ices and that these radicals play a considerable role in the degradation of naphthalene. However, it also appears that upon irradiation of naphthalene in liquid water, hydrogen peroxide, a species that accelerates naphthalene degradation, is formed. Based on this review we suggest that the role of hydrogen peroxide in interstellar ices should be further investigated.
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Affiliation(s)
- Y Keheyan
- ISMN-CNR, INAF, c/o Department of Chemistry, University of Rome La Sapienza, p.le A. Moro 5, Rome, 00185, Italy.
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12
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Soliman AR, Hamid AM, Abrash SA, El-Shall MS. Unconventional ionic hydrogen bonds: CH+⋯π (CC) binding energies and structures of benzene+(acetylene)1–4 clusters. Chem Phys Lett 2012. [DOI: 10.1016/j.cplett.2011.12.015] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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13
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Nagy A, Fulara J, Maier JP. Formation of Aromatic Structures from Chain Hydrocarbons in Electrical Discharges: Absorption and Fluorescence Study of C11H9+ and C11H9• Isomers in Neon Matrices. J Am Chem Soc 2011; 133:19796-806. [DOI: 10.1021/ja206522s] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Adam Nagy
- Department of Chemistry, University of Basel, Klingelbergstrasse 80, CH-4056 Basel, Switzerland
| | - Jan Fulara
- Department of Chemistry, University of Basel, Klingelbergstrasse 80, CH-4056 Basel, Switzerland
| | - John P. Maier
- Department of Chemistry, University of Basel, Klingelbergstrasse 80, CH-4056 Basel, Switzerland
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14
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Gichuhi WK, Suits AG. Primary Branching Ratios for the Low-Temperature Reaction of State-Prepared N2+ with CH4, C2H2, and C2H4. J Phys Chem A 2011; 115:7105-11. [DOI: 10.1021/jp112427r] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Wilson K. Gichuhi
- Department of Chemistry, Wayne State University, Detroit Michigan 48202, United States
| | - Arthur G. Suits
- Department of Chemistry, Wayne State University, Detroit Michigan 48202, United States
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15
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Ascenzi D, Aysina J, Zins EL, Schröder D, Žabka J, Alcaraz C, Price SD, Roithová J. Double ionization of cycloheptatriene and the reactions of the resulting C7Hn2+ dications (n = 6, 8) with xenon. Phys Chem Chem Phys 2011; 13:18330-8. [DOI: 10.1039/c1cp21634a] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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