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Porion P, Puibasset J. A statistical analysis of the first stages of freezing and melting of Lennard-Jones particles: Number and size distributions of transient nuclei. J Chem Phys 2024; 161:074501. [PMID: 39145557 DOI: 10.1063/5.0216704] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Accepted: 08/02/2024] [Indexed: 08/16/2024] Open
Abstract
The freezing/melting transition is at the heart of many natural and industrial processes. In the classical picture, the transition proceeds via the nucleation of the new phase, which has to overcome a barrier associated with the free energy cost of the growing nucleus. The total nucleation rate is also influenced by a kinetic factor, which somehow depends on the number of attempts to create a nucleus, that translates into a significant density of proto-nuclei in the system. These transient tiny nuclei are not accessible to experiments, but they can be observed in molecular simulations, and their number and size distributions can be acquired and analyzed. The number distributions are carefully characterized as a function of the system size, showing the expected behavior, with limited spurious effects due to the finite simulation box. It is also shown that the proto-nuclei do exist even in the stable phase, in agreement with the fact that the (unfavorable) volume contribution to their free energy is negligible in the first stages of nucleation. Moreover, the number and size distributions evolve continuously between the stable and the metastable phases, in particular when crossing the coexistence temperature. The size distributions associated with any nucleus and with the largest one have also been calculated, and their relationship recently established for bubbles in a liquid [Puibasset, J. Chem. Phys. 157, 191102 (2022)] has been shown to apply here. This is an important relation for free energy barrier calculations with biased molecular simulations.
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Affiliation(s)
- Patrice Porion
- ICMN, CNRS, Université d'Orléans, 1b Rue de la Férollerie, CS 40059, 45071 Orléans Cedex 02, France
| | - Joël Puibasset
- ICMN, CNRS, Université d'Orléans, 1b Rue de la Férollerie, CS 40059, 45071 Orléans Cedex 02, France
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Gish CM, Nan K, Hoy RS. Does the Sastry transition control cavitation in simple liquids? J Chem Phys 2020; 153:184504. [DOI: 10.1063/5.0023236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Caitlin M. Gish
- Department of Physics, University of South Florida, Tampa, Florida 33620, USA
| | - Kai Nan
- Department of Physics, University of South Florida, Tampa, Florida 33620, USA
| | - Robert S. Hoy
- Department of Physics, University of South Florida, Tampa, Florida 33620, USA
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Baidakov VG, Protsenko KR. Spontaneous Crystallization of a Supercooled Lennard-Jones Liquid: Molecular Dynamics Simulation. J Phys Chem B 2019; 123:8103-8112. [DOI: 10.1021/acs.jpcb.9b06618] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Vladimir G. Baidakov
- Institute of Thermal Physics of the Ural Branch of the Russian Academy of Sciences, Amundsen st. 107a, Ekaterinburg, 620016, Russia
| | - Kseniia R. Protsenko
- Institute of Thermal Physics of the Ural Branch of the Russian Academy of Sciences, Amundsen st. 107a, Ekaterinburg, 620016, Russia
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Suh D, Yasuoka K. Heterogeneous cavitation and crystallisation with an impurity by molecular dynamics. MOLECULAR SIMULATION 2017. [DOI: 10.1080/08927022.2017.1402308] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Donguk Suh
- Department of Mechanical Engineering, Keio University, Kōhoku-ku, Yokohama, Japan
| | - Kenji Yasuoka
- Department of Mechanical Engineering, Keio University, Kōhoku-ku, Yokohama, Japan
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Stieger T, Agha H, Schoen M, Mazza MG, Sengupta A. Hydrodynamic cavitation in Stokes flow of anisotropic fluids. Nat Commun 2017; 8:15550. [PMID: 28555615 PMCID: PMC5459993 DOI: 10.1038/ncomms15550] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2016] [Accepted: 04/07/2017] [Indexed: 01/10/2023] Open
Abstract
Cavitation, the nucleation of vapour in liquids, is ubiquitous in fluid dynamics, and is often implicated in a myriad of industrial and biomedical applications. Although extensively studied in isotropic liquids, corresponding investigations in anisotropic liquids are largely lacking. Here, by combining liquid crystal microfluidic experiments, nonequilibrium molecular dynamics simulations and theoretical arguments, we report flow-induced cavitation in an anisotropic fluid. The cavitation domain nucleates due to sudden pressure drop upon flow past a cylindrical obstacle within a microchannel. For an anisotropic fluid, the inception and growth of the cavitation domain ensued in the Stokes regime, while no cavitation was observed in isotropic liquids flowing under similar hydrodynamic parameters. Using simulations we identify a critical value of the Reynolds number for cavitation inception that scales inversely with the order parameter of the fluid. Strikingly, the critical Reynolds number for anisotropic fluids can be 50% lower than that of isotropic fluids. Cavitation is the formation of vapour bubbles within a liquid and is undesirable in many industrial applications. Here Stieger et al. show how the anisotropic fluids influence this process in a nematic liquid crystal and find that orientational ordering of molecules can tune the onset of cavitation.
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Affiliation(s)
- Tillmann Stieger
- Stranski-Laboratorium für Physikalische und Theoretische Chemie, Technische Universität Berlin, Straße des 17. Juni 115, 10623 Berlin, Germany
| | - Hakam Agha
- Max Planck Institute for Dynamics and Self-Organization (MPIDS), Am Faßberg 17, 37077 Göttingen, Germany.,Physics and Material Science Unit, University of Luxembourg, 162 Avenue de la Faiencerie, L-1511 Luxembourg, Luxembourg
| | - Martin Schoen
- Stranski-Laboratorium für Physikalische und Theoretische Chemie, Technische Universität Berlin, Straße des 17. Juni 115, 10623 Berlin, Germany.,Department of Chemical and Biomolecular Engineering, North Carolina State University, Engineering Building I, Box 7905, 911 Partners Way, Raleigh, North Carolina 27695, USA
| | - Marco G Mazza
- Max Planck Institute for Dynamics and Self-Organization (MPIDS), Am Faßberg 17, 37077 Göttingen, Germany
| | - Anupam Sengupta
- Ralph M. Parsons Laboratory for Environmental Science and Engineering, Department of Civil and Environmental Science and Engineering, Massachusetts Institute of Technology, 15 Vassar Street, Cambridge, Massachusetts 02139, USA.,Institute for Environmental Engineering, Department of Civil, Environmental and Geomatic Engineering, ETH Zurich, Stefano-Franscini-Platz 5, 8093 Zurich, Switzerland
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Abstract
Despite its relevance in biology and engineering, the molecular mechanism driving cavitation in water remains unknown. Using computer simulations, we investigate the structure and dynamics of vapor bubbles emerging from metastable water at negative pressures. We find that in the early stages of cavitation, bubbles are irregularly shaped and become more spherical as they grow. Nevertheless, the free energy of bubble formation can be perfectly reproduced in the framework of classical nucleation theory (CNT) if the curvature dependence of the surface tension is taken into account. Comparison of the observed bubble dynamics to the predictions of the macroscopic Rayleigh-Plesset (RP) equation, augmented with thermal fluctuations, demonstrates that the growth of nanoscale bubbles is governed by viscous forces. Combining the dynamical prefactor determined from the RP equation with CNT based on the Kramers formalism yields an analytical expression for the cavitation rate that reproduces the simulation results very well over a wide range of pressures. Furthermore, our theoretical predictions are in excellent agreement with cavitation rates obtained from inclusion experiments. This suggests that homogeneous nucleation is observed in inclusions, whereas only heterogeneous nucleation on impurities or defects occurs in other experiments.
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Jungblut S, Dellago C. Pathways to self-organization: Crystallization via nucleation and growth. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2016; 39:77. [PMID: 27498980 DOI: 10.1140/epje/i2016-16077-6] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2016] [Accepted: 07/13/2016] [Indexed: 06/06/2023]
Abstract
Crystallization, a prototypical self-organization process during which a disordered state spontaneously transforms into a crystal characterized by a regular arrangement of its building blocks, usually proceeds by nucleation and growth. In the initial stages of the transformation, a localized nucleus of the new phase forms in the old one due to a random fluctuation. Most of these nuclei disappear after a short time, but rarely a crystalline embryo may reach a critical size after which further growth becomes thermodynamically favorable and the entire system is converted into the new phase. In this article, we will discuss several theoretical concepts and computational methods to study crystallization. More specifically, we will address the rare event problem arising in the simulation of nucleation processes and explain how to calculate nucleation rates accurately. Particular attention is directed towards discussing statistical tools to analyze crystallization trajectories and identify the transition mechanism.
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Affiliation(s)
- S Jungblut
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090, Wien, Austria
| | - C Dellago
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090, Wien, Austria.
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Baidakov VG, Tipeev AO. Nucleation of liquid droplets and voids in a stretched Lennard-Jones fcc crystal. J Chem Phys 2015; 143:124501. [PMID: 26429018 DOI: 10.1063/1.4931108] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The method of molecular dynamics simulation has been used to investigate the phase decay of a metastable Lennard-Jones face-centered cubic crystal at positive and negative pressures. It is shown that at high degrees of metastability, crystal decay proceeds through the spontaneous formation and growth of new-phase nuclei. It has been found that there exists a certain boundary temperature. Below this temperature, the crystal phase disintegrates as the result of formation of voids, and above, as a result of formation of liquid droplets. The boundary temperature corresponds to the temperature of cessation of a crystal-liquid phase equilibrium when the melting line comes in contact with the spinodal of the stretched liquid. The results of the simulations are interpreted in the framework of classical nucleation theory. The thermodynamics of phase transitions in solids has been examined with allowance for the elastic energy of stresses arising owing to the difference in the densities of the initial and the forming phases. As a result of the action of elastic forces, at negative pressures, the boundary of the limiting superheating (stretching) of a crystal approaches the spinodal, on which the isothermal bulk modulus of dilatation becomes equal to zero. At the boundary of the limiting superheating (stretching), the shape of liquid droplets and voids is close to the spherical one.
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Affiliation(s)
- Vladimir G Baidakov
- Institute of Thermophysics, Ural Branch of the Russian Academy of Sciences, Amundsen Street 107a, 620016 Ekaterinburg, Russia
| | - Azat O Tipeev
- Institute of Thermophysics, Ural Branch of the Russian Academy of Sciences, Amundsen Street 107a, 620016 Ekaterinburg, Russia
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Jungblut S, Dellago C. Caveats of mean first-passage time methods applied to the crystallization transition: Effects of non-Markovianity. J Chem Phys 2015; 142:064103. [DOI: 10.1063/1.4907364] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Affiliation(s)
- Swetlana Jungblut
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090 Wien, Austria
| | - Christoph Dellago
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090 Wien, Austria
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Zhukhovitskii DI. Molecular dynamics study of nanobubbles in the equilibrium Lennard-Jones fluid. J Chem Phys 2013; 139:164513. [DOI: 10.1063/1.4826648] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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