1
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Naim C, Zaleśny R, Jacquemin D. Two-Photon Absorption Strengths of Small Molecules: Reference CC3 Values and Benchmarks. J Chem Theory Comput 2024; 20:9093-9106. [PMID: 39374489 DOI: 10.1021/acs.jctc.4c01090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/09/2024]
Abstract
We present a large dataset of highly accurate two-photon transition strengths (δTPA) determined for standard small molecules. Our reference values have been calculated using the quadratic response implementation of the third-order coupled cluster method including iterative triples (Q-CC3). The aug-cc-pVTZ atomic basis set is used for molecules with up to five non-hydrogen atoms, while larger molecules are assessed with aug-cc-pVDZ; the differences due to the basis sets are discussed. This dataset, encompassing 82 singlet transitions of various characters (Rydberg, valence, and double excitations), enables a comprehensive benchmark of smaller basis sets and alternative wavefunction methods when Q-CC3 calculations become beyond reach as well as time-dependent density functional theory (TD-DFT) approaches. The evaluated wavefunction methods include quadratic response and equation-of-motion CCSD approximations, Q-CC2, and second-order algebraic diagrammatic construction in its intermediate state representation (I-ADC2). In the TD-DFT framework, a set of five commonly used exchange-correlation functionals are evaluted. This extensive analysis provides a quantitative assessment of these methods, revealing how different system sizes, response intensities, and types of transitions affect their performances.
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Affiliation(s)
- Carmelo Naim
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
| | - Robert Zaleśny
- Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
| | - Denis Jacquemin
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
- Institut Universitaire de France (IUF), F-75005 Paris, France
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2
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Khanna A, Shedge SV, Zuehlsdorff TJ, Isborn CM. Calculating absorption and fluorescence spectra for chromophores in solution with ensemble Franck-Condon methods. J Chem Phys 2024; 161:044121. [PMID: 39077907 DOI: 10.1063/5.0217080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2024] [Accepted: 07/03/2024] [Indexed: 07/31/2024] Open
Abstract
Accurately modeling absorption and fluorescence spectra for molecules in solution poses a challenge due to the need to incorporate both vibronic and environmental effects, as well as the necessity of accurate excited state electronic structure calculations. Nuclear ensemble approaches capture explicit environmental effects, Franck-Condon methods capture vibronic effects, and recently introduced ensemble-Franck-Condon approaches combine the advantages of both methods. In this study, we present and analyze simulated absorption and fluorescence spectra generated with combined ensemble-Franck-Condon approaches for three chromophore-solvent systems and compare them to standard ensemble and Franck-Condon spectra, as well as to the experiment. Employing configurations obtained from ground and excited state ab initio molecular dynamics, three combined ensemble-Franck-Condon approaches are directly compared to each other to assess the accuracy and relative computational time. We find that the approach employing an average finite-temperature Franck-Condon line shape generates spectra nearly identical to the direct summation of an ensemble of Franck-Condon spectra at one-fourth of the computational cost. We analyze how the spectral simulation method, as well as the level of electronic structure theory, affects spectral line shapes and associated Stokes shifts for 7-nitrobenz-2-oxa-1,3-diazol-4-yl and Nile red in dimethyl sulfoxide and 7-methoxy coumarin-4-acetic acid in methanol. For the first time, our studies show the capability of combined ensemble-Franck-Condon methods for both absorption and fluorescence spectroscopy and provide a powerful tool for simulating linear optical spectra.
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Affiliation(s)
- Ajay Khanna
- Chemistry and Biochemistry, University of California Merced, Merced, California 95343, USA
| | - Sapana V Shedge
- Chemistry and Biochemistry, University of California Merced, Merced, California 95343, USA
| | - Tim J Zuehlsdorff
- Department of Chemistry, Oregon State University, Corvallis, Oregon 97331, USA
| | - Christine M Isborn
- Chemistry and Biochemistry, University of California Merced, Merced, California 95343, USA
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3
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Myers CA, Lu SY, Shedge S, Pyuskulyan A, Donahoe K, Khanna A, Shi L, Isborn CM. Axial H-Bonding Solvent Controls Inhomogeneous Spectral Broadening, While Peripheral H-Bonding Solvent Controls Vibronic Broadening: Cresyl Violet in Methanol. J Phys Chem B 2024; 128:5685-5699. [PMID: 38832562 DOI: 10.1021/acs.jpcb.4c01401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2024]
Abstract
The dynamics of the nuclei of both a chromophore and its condensed-phase environment control many spectral features, including the vibronic and inhomogeneous broadening present in spectral line shapes. For the cresyl violet chromophore in methanol, we here analyze and isolate the effect of specific chromophore-solvent interactions on simulated spectral densities, reorganization energies, and linear absorption spectra. Employing both chromophore and its condensed-phase environment control many spectral features, including the vibronic and inhomogeneous broadening present in spectral line shapes. For the cresyl violet chromophore in methanol, we here analyze and isolate the effect of specific chromophore-solvent interactions on simulated spectral densities, reorganization energies, and linear absorption spectra. Employing both force field and ab initio molecular dynamics trajectories along with the inclusion of only certain solvent molecules in the excited-state calculations, we determine that the methanol molecules axial to the chromophore are responsible for the majority of inhomogeneous broadening, with a single methanol molecule that forms an axial hydrogen bond dominating the response. The strong peripheral hydrogen bonds do not contribute to spectral broadening, as they are very stable throughout the dynamics and do not lead to increased energy-gap fluctuations. We also find that treating the strong peripheral hydrogen bonds as molecular mechanical point charges during the molecular dynamics simulation underestimates the vibronic coupling. Including these peripheral hydrogen bonding methanol molecules in the quantum-mechanical region in a geometry optimization increases the vibronic coupling, suggesting that a more advanced treatment of these strongly interacting solvent molecules during the molecular dynamics trajectory may be necessary to capture the full vibronic spectral broadening.
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Affiliation(s)
- Christopher A Myers
- Department of Chemistry and Biochemistry, University of California Merced, Merced, California 95343, United States
| | - Shao-Yu Lu
- Department of Chemistry and Biochemistry, University of California Merced, Merced, California 95343, United States
| | - Sapana Shedge
- Department of Chemistry and Biochemistry, University of California Merced, Merced, California 95343, United States
| | - Arthur Pyuskulyan
- Department of Chemistry and Biochemistry, University of California Merced, Merced, California 95343, United States
| | - Katherine Donahoe
- Department of Chemistry and Biochemistry, University of California Merced, Merced, California 95343, United States
| | - Ajay Khanna
- Department of Chemistry and Biochemistry, University of California Merced, Merced, California 95343, United States
| | - Liang Shi
- Department of Chemistry and Biochemistry, University of California Merced, Merced, California 95343, United States
| | - Christine M Isborn
- Department of Chemistry and Biochemistry, University of California Merced, Merced, California 95343, United States
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4
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Ye H, Becca JC, Jensen L. Modeling the near-field effect on molecular excited states using the discrete interaction model/quantum mechanical method. J Chem Phys 2024; 160:014707. [PMID: 38174789 DOI: 10.1063/5.0164711] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Accepted: 12/11/2023] [Indexed: 01/05/2024] Open
Abstract
Strong light-matter interactions significantly modify the optical properties of molecules in the vicinity of plasmonic metal nanoparticles. Since the dimension of the plasmonic cavity approaches that of the molecules, it is critical to explicitly describe the nanoparticle junctions. In this work, we use the discrete interaction model/quantum mechanical (DIM/QM) method to model the coupling between the plasmonic near-field and molecular excited states. DIM/QM is a combined electrodynamics/quantum mechanical model that uses an atomistic description of the nanoparticle. We extend the DIM/QM method to include the local field effects in the sum-over-state formalism of time-dependent density functional theory. As a test of the method, we study the interactions between small organic chromophores and metal nanoparticles. In particular, we examine how the inclusion of multiple electronic transitions and intermolecular interactions modify the coupling between molecules and nanoparticles. Using the sum-over-state formalism of DIM/QM, we show that two-state models break down when the plasmon excitation is detuned from the molecular excitations. To gain further insight, we compare the simple coupled-dipole model (CDM) with the DIM/QM model. We find that CDM works well for simple systems but fails when going beyond the single molecule or single nanoparticle cases. We also find that the coupling depends strongly on the site of the nanoparticle in which the chromophore couples to. Our work suggests the importance of explicitly describing the cavity to capture the atomistic level local field environment in which the molecule strongly couples to.
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Affiliation(s)
- Hepeng Ye
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Jeffrey C Becca
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Lasse Jensen
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802, USA
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5
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Sitkiewicz SP, Matito E, Luis JM, Zaleśny R. Pitfall in simulations of vibronic TD-DFT spectra: diagnosis and assessment. Phys Chem Chem Phys 2023; 25:30193-30197. [PMID: 37905423 DOI: 10.1039/d3cp04276f] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2023]
Abstract
In this Communication, we study the effect of spurious oscillations in the profiles of energy derivatives with respect to nuclear coordinates calculated with density functional approximations (DFAs) for formaldehyde, pyridine, and furan in their ground and electronic excited states. These spurious oscillations, which can only be removed using extensive integration grids that increase enormously the CPU cost of DFA calculations, are significant in the case of third- and fourth-order energy derivatives of the ground and excited states computed by M06-2X and ωB97X functionals. The errors in question propagate to anharmonic vibronic spectra computed under the Franck-Condon approximation, i.e., positions and intensities of vibronic transitions are affected to a large extent (shifts as significant as hundreds of cm-1 were observed). On the other hand, the LC-BLYP and CAM-B3LYP functionals show a much less pronounced effect due to spurious oscillations. Based on the results presented herein, we recommend either LC-BLYP or CAM-B3LYP with integration grids (250, 974) (or larger) for numerically stable simulations of vibronic spectra including anharmonic effects.
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Affiliation(s)
- Sebastian P Sitkiewicz
- Wrocław Centre for Networking and Supercomputing, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, Wrocław PL-50370, Poland.
| | - Eduard Matito
- Donostia International Physics Center (DIPC), Manuel Lardizabal Ibilbidea 4, Donostia 20018, Euskadi, Spain
- Ikerbasque Foundation for Science, Bilbao 48011, Euskadi, Spain
| | - Josep M Luis
- Institute of Computational Chemistry and Catalysis and Department of Chemistry, University of Girona, Campus de Montilivi, 17003, Girona, Catalonia, Spain.
| | - Robert Zaleśny
- Faculty of Chemistry, Wroclaw University of Science and Technology, Wybrzeże Wyspiańskiego 27, Wrocław 50-370, Poland.
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6
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Petrusevich EF, Bousquet MHE, Ośmiałowski B, Jacquemin D, Luis JM, Zaleśny R. Cost-Effective Simulations of Vibrationally-Resolved Absorption Spectra of Fluorophores with Machine-Learning-Based Inhomogeneous Broadening. J Chem Theory Comput 2023; 19:2304-2315. [PMID: 37096370 PMCID: PMC10134414 DOI: 10.1021/acs.jctc.2c01285] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/08/2023]
Abstract
The results of electronic and vibrational structure simulations are an invaluable support for interpreting experimental absorption/emission spectra, which stimulates the development of reliable and cost-effective computational protocols. In this work, we contribute to these efforts and propose an efficient first-principle protocol for simulating vibrationally-resolved absorption spectra, including nonempirical estimations of the inhomogeneous broadening. To this end, we analyze three key aspects: (i) a metric-based selection of density functional approximation (DFA) so to benefit from the computational efficiency of time-dependent density function theory (TD-DFT) while safeguarding the accuracy of the vibrationally-resolved spectra, (ii) an assessment of two vibrational structure schemes (vertical gradient and adiabatic Hessian) to compute the Franck-Condon factors, and (iii) the use of machine learning to speed up nonempirical estimations of the inhomogeneous broadening. In more detail, we predict the absorption band shapes for a set of 20 medium-sized fluorescent dyes, focusing on the bright ππ★ S0 → S1 transition and using experimental results as references. We demonstrate that, for the studied 20-dye set which includes structures with large structural variability, the preselection of DFAs based on an easily accessible metric ensures accurate band shapes with respect to the reference approach and that range-separated functionals show the best performance when combined with the vertical gradient model. As far as band widths are concerned, we propose a new machine-learning-based approach for determining the inhomogeneous broadening induced by the solvent microenvironment. This approach is shown to be very robust offering inhomogeneous broadenings with errors as small as 2 cm-1 with respect to genuine electronic-structure calculations, with a total CPU time reduced by 98%.
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Affiliation(s)
- Elizaveta F. Petrusevich
- Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
- Institute of Computational Chemistry and Catalysis and Department of Chemistry, University of Girona, Campus de Montilivi, 17003 Girona, Catalonia, Spain
| | | | - Borys Ośmiałowski
- Faculty of Chemistry, Nicolaus Copernicus University, Gagarina Street 7, PL-87-100 Toruń, Poland
| | - Denis Jacquemin
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
- Institut Universitaire de France (IUF), F-75005 Paris, France
| | - Josep M. Luis
- Institute of Computational Chemistry and Catalysis and Department of Chemistry, University of Girona, Campus de Montilivi, 17003 Girona, Catalonia, Spain
| | - Robert Zaleśny
- Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
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7
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Stark CW, Rammo M, Trummal A, Uudsemaa M, Pahapill J, Sildoja MM, Tshepelevitsh S, Leito I, Young DC, Szymański B, Vakuliuk O, Gryko DT, Rebane A. On-off-on Control of Molecular Inversion Symmetry via Multi-stage Protonation: Elucidating Vibronic Laporte Rule. Angew Chem Int Ed Engl 2022; 61:e202212581. [PMID: 36286343 DOI: 10.1002/anie.202212581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Indexed: 11/07/2022]
Abstract
The Laporte rule dictates that one- and two-photon absorption spectra of inversion-symmetric molecules should display alternatively forbidden electronic transitions; however, for organic fluorophores, drawing clear distinction between the symmetric- and non-inversion symmetric two-photon spectra is often obscured due to prevalent vibronic interactions. We take advantage of consecutive single- and double-protonation to break and then reconstitute inversion symmetry in a nominally symmetric diketopyrrolopyrrole, causing large changes in two-photon absorption. By performing detailed one- and two-photon titration experiments, with supporting quantum-chemical model calculations, we explain how certain low-frequency vibrational modes may lead to apparent deviations from the strict Laporte rule. As a result, the system may be indeed considered as an on-off-on inversion symmetry switch, opening new avenues for two-photon sensing applications.
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Affiliation(s)
- Charles W Stark
- Laboratory of Chemical Physics, Keemilise ja Bioloogilise Füüsika Instituut, Akadeemia tee 23, 12618, Tallinn, Estonia
| | - Matt Rammo
- Laboratory of Chemical Physics, Keemilise ja Bioloogilise Füüsika Instituut, Akadeemia tee 23, 12618, Tallinn, Estonia
| | - Aleksander Trummal
- Laboratory of Chemical Physics, Keemilise ja Bioloogilise Füüsika Instituut, Akadeemia tee 23, 12618, Tallinn, Estonia
| | - Merle Uudsemaa
- Laboratory of Chemical Physics, Keemilise ja Bioloogilise Füüsika Instituut, Akadeemia tee 23, 12618, Tallinn, Estonia
| | - Juri Pahapill
- Laboratory of Chemical Physics, Keemilise ja Bioloogilise Füüsika Instituut, Akadeemia tee 23, 12618, Tallinn, Estonia
| | - Meelis-Mait Sildoja
- Laboratory of Chemical Physics, Keemilise ja Bioloogilise Füüsika Instituut, Akadeemia tee 23, 12618, Tallinn, Estonia
| | - Sofja Tshepelevitsh
- Institute of Chemistry, Tartu Ülikool, 14a Ravila Str, 50411, Tartu, Estonia
| | - Ivo Leito
- Institute of Chemistry, Tartu Ülikool, 14a Ravila Str, 50411, Tartu, Estonia
| | - David C Young
- Instytut Chemii Organicznej, Polska Akademia Nauk, Kasprzaka 44/52, 01-224, Warsaw, Poland
| | - Bartosz Szymański
- Instytut Chemii Organicznej, Polska Akademia Nauk, Kasprzaka 44/52, 01-224, Warsaw, Poland
| | - Olena Vakuliuk
- Instytut Chemii Organicznej, Polska Akademia Nauk, Kasprzaka 44/52, 01-224, Warsaw, Poland
| | - Daniel T Gryko
- Instytut Chemii Organicznej, Polska Akademia Nauk, Kasprzaka 44/52, 01-224, Warsaw, Poland
| | - Aleksander Rebane
- Laboratory of Chemical Physics, Keemilise ja Bioloogilise Füüsika Instituut, Akadeemia tee 23, 12618, Tallinn, Estonia.,Department of Physics, Montana State University, 264 EPS, Bozeman, MT, 59717, USA
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8
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Busson B. All-experimental analysis of doubly resonant sum-frequency generation spectra for Franck–Condon and Herzberg–Teller vibronic modes. J Chem Phys 2022; 156:204704. [DOI: 10.1063/5.0091374] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The transform technique applied to the analysis of doubly resonant sum-frequency generation (DR-SFG) spectra is extended to include Herzberg–Teller (HT) vibronic modes. The experimentally measured overlap spectral function generates all the energy resonant amplitudes of the DR-SFG excitation function for both Franck–Condon (FC) and HT modes. When FC modes dominate the DR-SFG spectra, a methodology is provided to perform efficient curve fitting and orientation analysis in order to extract FC activities of the various vibration modes from experimental spectra with the help of a molecular model. Determination of the FC or HT natures of the vibration modes from DR-SFG data is also shown to be possible through their visible line shapes with an appropriate choice of polarizations. As an example, experimental DR-SFG data suggest that a known HT-active mode in the vibronic structure of Rhodamine 6G monomers exhibits a FC behavior in molecular aggregates.
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Affiliation(s)
- Bertrand Busson
- Université Paris-Saclay, CNRS, Institut de Chimie Physique, UMR 8000, 91405 Orsay, France
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9
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Zheng RH, Dong FQ, Wei WM, Guan WZ. Doubly Resonant Sum-Frequency Vibrational Spectroscopy of 1,1'-Bi-2-naphthol Chiral Solutions Due to the Nonadiabatic Effect. J Phys Chem B 2022; 126:1558-1565. [PMID: 35167291 DOI: 10.1021/acs.jpcb.1c08870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Second-order nonlinear spectroscopy is a powerful tool in exploring significant physical and chemical characteristics at various interfaces and on chiral systems. We present a method of computing the nonadiabatic couplings between the different excited electronic states with time-dependent density functional theory and then study doubly resonant sum-frequency vibrational spectroscopy (SFVS) of chiral solutions due to the nonadiabatic, Franck-Condon, and Herzberg-Teller (HT) effects. The calculations for R-1,1'-bi-2-naphthol show that the theoretical spectra agree with experiment, and the nonadiabatic corrections are comparable with the HT terms or even larger for some vibrational modes, which is different from the mechanism of SFVS off electronic resonance. Doubly resonant SFVS may be a useful method of studying the nonradiative transition and nonadiabatic effect between the excited electronic states.
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Affiliation(s)
- Ren-Hui Zheng
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
| | - Feng-Qi Dong
- School of Basic Medical Sciences, Anhui Medical University, Hefei, Anhui 230032, P. R. China
| | - Wen-Mei Wei
- School of Basic Medical Sciences, Anhui Medical University, Hefei, Anhui 230032, P. R. China
| | - Wei-Zhong Guan
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
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10
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Chołuj M, Alam MM, Beerepoot MTP, Sitkiewicz SP, Matito E, Ruud K, Zaleśny R. Choosing Bad versus Worse: Predictions of Two-Photon-Absorption Strengths Based on Popular Density Functional Approximations. J Chem Theory Comput 2022; 18:1046-1060. [PMID: 35080389 PMCID: PMC8830054 DOI: 10.1021/acs.jctc.1c01056] [Citation(s) in RCA: 26] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
We present a benchmark
study of density functional approximation
(DFA) performances in predicting the two-photon-absorption strengths
in π-conjugated molecules containing electron-donating/-accepting
moieties. A set of 48 organic molecules is chosen for this purpose,
for which the two-photon-absorption (2PA) parameters are evaluated
using different DFAs, including BLYP, PBE, B3LYP, PBE0, CAM-B3LYP,
LC-BLYP, and optimally tuned LC-BLYP. Minnesota functionals and ωB97X-D
are also used, applying the two-state approximation, for a subset
of molecules. The efficient resolution-of-identity implementation
of the coupled-cluster CC2 model (RI-CC2) is used as a reference for
the assessment of the DFAs. Two-state models within the framework
of both DFAs and RI-CC2 are used to gain a deeper insight into the
performance of different DFAs. Our results give a clear picture of
the performance of the density functionals in describing the two-photon
activity in dipolar π-conjugated systems. The results show that
global hybrids are best suited to reproduce the absolute values of
2PA strengths of donor–acceptor molecules. The range-separated
functionals CAM-B3LYP and optimally tuned LC-BLYP, however, show the
highest linear correlations with the reference RI-CC2 results. Hence,
we recommend the latter DFAs for structure–property studies
across large series of dipolar compounds.
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Affiliation(s)
- Marta Chołuj
- Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
| | - Md Mehboob Alam
- Department of Chemistry, Indian Institute of Technology Bhilai, Sejbahar, Raipur, Chhattisgarh 492015, India
| | - Maarten T P Beerepoot
- Hylleraas Centre for Quantum Molecular Sciences, Department of Chemistry, UiT The Arctic University of Norway, N-9037 Tromsø, Norway
| | - Sebastian P Sitkiewicz
- Donostia International Physics Center (DIPC), Manuel Lardizabal Ibilbidea 4, 20018 Donostia, Euskadi, Spain.,Kimika Fakultatea, Euskal Herriko Unibertsitatea (UPV/EHU), 20080 Donostia, Euskadi, Spain
| | - Eduard Matito
- Donostia International Physics Center (DIPC), Manuel Lardizabal Ibilbidea 4, 20018 Donostia, Euskadi, Spain.,Ikerbasque Foundation for Science, Plaza Euskadi 5, 48009 Bilbao, Euskadi, Spain
| | - Kenneth Ruud
- Hylleraas Centre for Quantum Molecular Sciences, Department of Chemistry, UiT The Arctic University of Norway, N-9037 Tromsø, Norway
| | - Robert Zaleśny
- Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
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11
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Qiu F, Gong ZY, Cao D, Song C, Tian G, Duan S, Luo Y. Optical Images of Molecular Vibronic Couplings from Tip-Enhanced Fluorescence Excitation Spectroscopy. JACS AU 2022; 2:150-158. [PMID: 35098231 PMCID: PMC8790811 DOI: 10.1021/jacsau.1c00442] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/06/2021] [Indexed: 06/14/2023]
Abstract
Tip-based photoemission spectroscopic techniques have now achieved subnanometer resolution that allows visualization of the chemical structure and even the ground-state vibrational modes of a single molecule. However, the ability to visualize the interplay between electronic and nuclear motions of excited states, i.e., vibronic couplings, is yet to be explored. Herein, we theoretically propose a new technique, namely, tip-enhanced fluorescence excitation (TEFE). TEFE takes advantage of the highly confined plasmonic field and thus can offer a possibility to directly visualize the vibronic effect of a single molecule in real space for arbitrary excited states in a given energy window. Numerical simulations for a single porphine molecule confirm that vibronic couplings originating from Herzberg-Teller (HT) active modes can be visually identified. TEFE further enables high-order vibrational transitions that are normally suppressed in the other plasmon-based processes. Images of the combination vibrational transitions have the same pattern as that of their parental HT active mode's fundamental transition, providing a direct protocol for measurements of the activity of Franck-Condon modes of selected excited states. These findings strongly suggest that TEFE is a powerful strategy to identify the involvement of molecular moieties in the complicated electron-nuclear interactions of the excited states at the single-molecule level.
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Affiliation(s)
- Feifei Qiu
- State
Key Laboratory of Metastable Materials Science & Technology and
Key Laboratory for Microstructural Material Physics of Hebei Province,
School of Science, Yanshan University, Qinhuangdao 066004, P.R. China
| | - Zu-Yong Gong
- Collaborative
Innovation Center of Chemistry for Energy Materials, Shanghai Key
Laboratory of Molecular Catalysis and Innovative Materials, MOE Key
Laboratory of Computational Physical Sciences, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
| | - Dongwei Cao
- State
Key Laboratory of Metastable Materials Science & Technology and
Key Laboratory for Microstructural Material Physics of Hebei Province,
School of Science, Yanshan University, Qinhuangdao 066004, P.R. China
| | - Ce Song
- Hefei
National Laboratory for Physical Sciences at the Microscale and Synergetic
Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026 Anhui, P.R. China
- Department
of Theoretical Chemistry and Biology, School of Engineering Sciences
in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, S-106 91 Stockholm, Sweden
| | - Guangjun Tian
- State
Key Laboratory of Metastable Materials Science & Technology and
Key Laboratory for Microstructural Material Physics of Hebei Province,
School of Science, Yanshan University, Qinhuangdao 066004, P.R. China
| | - Sai Duan
- Collaborative
Innovation Center of Chemistry for Energy Materials, Shanghai Key
Laboratory of Molecular Catalysis and Innovative Materials, MOE Key
Laboratory of Computational Physical Sciences, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
| | - Yi Luo
- Hefei
National Laboratory for Physical Sciences at the Microscale and Synergetic
Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026 Anhui, P.R. China
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12
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Gam S, Messaoudi S, Halet JF, Boucekkine A. How do structural factors determine the linear and non-linear optical properties of fluorene-containing quadrupolar fluorophores? A theoretical answer. NEW J CHEM 2022. [DOI: 10.1039/d2nj01192a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The linear and non-linear optical properties of the different components of a series of push–push and pull–pull quadrupolar fluorophore derivatives are investigated.
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Affiliation(s)
- Safa Gam
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes (ISCR) – UMR 6226, F35000 Rennes, France
- Faculty of Sciences of Bizerte FSB, University of Carthage, 7021 Jarzouna, Tunisia
- Laboratory of Materials, Molecules and Applications, IPEST, University of Carthage, Sidi Bou Said Road, B.P. 51, 2070 La Marsa, Tunisia
| | - Sabri Messaoudi
- Faculty of Sciences of Bizerte FSB, University of Carthage, 7021 Jarzouna, Tunisia
- Laboratory of Materials, Molecules and Applications, IPEST, University of Carthage, Sidi Bou Said Road, B.P. 51, 2070 La Marsa, Tunisia
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
| | - Jean-François Halet
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes (ISCR) – UMR 6226, F35000 Rennes, France
- CNRS – Saint-Gobain – NIMS, IRL 3629, Laboratory for Innovative Key Materials and Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba, 305-0044, Japan
| | - Abdou Boucekkine
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes (ISCR) – UMR 6226, F35000 Rennes, France
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13
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Guthmuller J. Sum-over-state expressions including second-order Herzberg-Teller effects for the calculation of absorption and resonance Raman intensities. J Chem Phys 2021; 155:084107. [PMID: 34470349 DOI: 10.1063/5.0057731] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The sum-over-state expressions are derived to calculate the second-order Herzberg-Teller (HT) effects in absorption and resonance Raman spectroscopies. These effects depend on the second derivatives of the transition dipole moment with respect to the vibrational coordinates. The method is applied to the molecule of 1,3-butadiene using density functional theory calculations. It is found that the second-order HT effects are significant for both absorption and resonance Raman intensities, and that the calculated spectra are in good agreement with the experimental data. The second-order HT effects originate from diagonal elements of the second derivatives matrix, whereas non-diagonal elements have a negligible impact on the intensities of 1,3-butadiene.
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Affiliation(s)
- Julien Guthmuller
- Institute of Physics and Computer Science, Faculty of Applied Physics and Mathematics, Gdańsk University of Technology, Narutowicza 11/12, 80-233 Gdańsk, Poland
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14
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Busson B, Farhat M, Nini Teunda PJ, Roy S, Jarisz T, Hore DK. All-experimental analysis of doubly resonant sum-frequency generation spectra: Application to aggregated rhodamine films. J Chem Phys 2021; 154:224704. [PMID: 34241238 DOI: 10.1063/5.0048787] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
A new method is proposed to analyze Doubly Resonant infrared-visible Sum-Frequency Generation (DR-SFG) spectra. Based on the transform technique, this approach is free from assumptions about vibronic modes, energies, or line widths and accurately captures through the overlap spectral function all required aspects of the vibronic structure from simple experimental linear absorption spectra. Details and implementation of the method are provided along with three examples treating rhodamine thin films about one monolayer thick. The technique leads to a perfect agreement between experiment and simulations of the visible DR-SFG line shapes, even in the case of complex intermolecular interactions resulting from J-aggregated chromophores in heterogeneous films. For films with mixed H- and J-aggregates, separation of their responses shows that the J-aggregate DR-SFG response is dominant. Our analysis also accounts for the unexplained results published in the early times of DR-SFG experiments.
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Affiliation(s)
- Bertrand Busson
- Université Paris-Saclay, CNRS, Institut de Chimie Physique, UMR 8000, 91405 Orsay, France
| | - Maissa Farhat
- Université Paris-Saclay, CNRS, Institut de Chimie Physique, UMR 8000, 91405 Orsay, France
| | | | - Sandra Roy
- Department of Chemistry, University of Victoria, Victoria, British Columbia V8W 3V6, Canada
| | - Tasha Jarisz
- Department of Chemistry, University of Victoria, Victoria, British Columbia V8W 3V6, Canada
| | - Dennis K Hore
- Department of Chemistry, University of Victoria, Victoria, British Columbia V8W 3V6, Canada
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15
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Zhao J, Wang Z, Lan J, Khan I, Ye X, Wan J, Fei Y, Huang S, Li S, Kang J. Recent advances and perspectives in photo-induced enhanced Raman spectroscopy. NANOSCALE 2021; 13:8707-8721. [PMID: 33960340 DOI: 10.1039/d1nr01255j] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Phototreatment is at the leading edge of a research hot topic as a driving force for structural transformation, spectral and electromagnetism improvements, and the functional performance of nanomaterials. Light irradiation can excite surface plasmons in noble metal nanoparticles, create electron-hole pairs, and produce charge transfer in semiconductor substrates, which have led to it being widely used in surface-enhanced Raman spectroscopy (SERS) for life sciences, environmental protection, and biological analysis. Photo-induced enhanced Raman spectroscopy (PIERS) is a new technology developed on the basis of traditional SERS and has proven to be an efficient way to resolve several critical challenges thanks to its incomparable superiority for incontiguous operation, efficient charge separation and enrichment, and a large signal enhancement for a wide range of biomolecules at the trace level. This makes PIERS a powerful technique with very appealing and promising applications in various branches of analytical science. In this review, the enhancement mechanisms of PIERS are analyzed in comparison with SERS. Afterward, the parameters influencing the enhancement of PIERS, including the substrate, light irradiation, and relaxation are discussed in detail. Finally, some perspectives on further developments of PIERS are exemplified. The PIERS technique will continue to evolve and grow with new developments and its successful application in bioanalysis and life sciences.
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Affiliation(s)
- Jingtian Zhao
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China. and Shenzhen Research Institute of Xiamen University, Shenzhen 518057, China
| | - Ziyun Wang
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China. and Shenzhen Research Institute of Xiamen University, Shenzhen 518057, China
| | - Jinshen Lan
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China. and Shenzhen Research Institute of Xiamen University, Shenzhen 518057, China
| | - Imran Khan
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China. and Shenzhen Research Institute of Xiamen University, Shenzhen 518057, China
| | - Xiaofang Ye
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China. and Shenzhen Research Institute of Xiamen University, Shenzhen 518057, China
| | - Jing Wan
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China. and Shenzhen Research Institute of Xiamen University, Shenzhen 518057, China
| | - Yuchen Fei
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China. and Shenzhen Research Institute of Xiamen University, Shenzhen 518057, China
| | - Shengli Huang
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China. and Shenzhen Research Institute of Xiamen University, Shenzhen 518057, China
| | - Shuping Li
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China.
| | - Junyong Kang
- Engineering Research Center of Micro-nano Optoelectronic Materials and Devices, Ministry of Education, Fujian Key Laboratory of Semiconductor Materials and Applications, CI Center for OSED, Department of Physics, Jiujiang Research Institute, Xiamen University, Xiamen 361005, China.
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16
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Olson JE, Hu Z, Best MD, Jensen L, Camden JP. Surface-enhanced hyper-Raman scattering of Rhodamine 6G isotopologues: Assignment of lower vibrational frequencies. J Chem Phys 2021; 154:034703. [PMID: 33499640 DOI: 10.1063/5.0031679] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
Abstract
We report a comprehensive experimental and theoretical study of the lower-wavenumber vibrational modes in the surface-enhanced hyper-Raman scattering (SEHRS) of Rhodamine 6G (R6G) and its isotopologue R6G-d4. Measurements acquired on-resonance with two different electronic states, S1 and S2, are compared to the time-dependent density functional theory computations of the resonance hyper-Raman spectra and electrodynamics-quantum mechanical computations of the SEHRS spectra on-resonance with S1 and S2. After accounting for surface orientation, we find excellent agreement between experiment and theory for both R6G and its isotopologue. We then present a detailed analysis of the complex vibronic coupling effects in R6G and the importance of surface orientation for characterizing the system. This combination of theory and experiment allows, for the first time, an unambiguous assignment of lower-wavenumber vibrational modes of R6G and its isotopologue R6G-d4.
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Affiliation(s)
- Jacob E Olson
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556-5670, USA
| | - Zhongwei Hu
- Department of Chemistry, The Pennsylvania State University, 104 Chemistry Building, University Park, Pennsylvania 16802-4615, USA
| | - Michael D Best
- Department of Chemistry, University of Tennessee, 1420 Circle Drive, Knoxville, Tennessee 37996, USA
| | - Lasse Jensen
- Department of Chemistry, The Pennsylvania State University, 104 Chemistry Building, University Park, Pennsylvania 16802-4615, USA
| | - Jon P Camden
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556-5670, USA
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17
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Busson B. Doubly resonant SFG and DFG spectroscopies: An analytic model for data analysis including distorted and rotated vibronic levels. I. Theory. J Chem Phys 2020; 153:174701. [DOI: 10.1063/5.0022760] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Affiliation(s)
- Bertrand Busson
- Université Paris-Saclay, CNRS, Institut de Chimie Physique, UMR 8000, 91405 Orsay, France
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18
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Zheng RH, Wei WM, Xing T. Herzberg-Teller Effect Predominates in Sum-Frequency Vibrational Spectroscopy of Limonene Chiral Liquids. J Phys Chem B 2020; 124:6642-6650. [PMID: 32649203 DOI: 10.1021/acs.jpcb.0c04519] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We theoretically study the bulk sum-frequency vibrational spectroscopy of chiral liquids under the influence of the Franck-Condon, Herzberg-Teller, and nonadiabatic effects. With quantum chemistry computations we calculate the chiral spectra for the R-limonene molecule. When we compare the theoretical and experimental spectra, we find that the Herzberg-Teller effect under the Born-Oppenheimer approximation, instead of the nonadiabatic effect, predominates in the chiral spectra.
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Affiliation(s)
- Ren-Hui Zheng
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, P. R. China
| | - Wen-Mei Wei
- School of Basic Medical Science, Anhui Medical University, Hefei, Anhui 230032, P. R. China
| | - Tao Xing
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, P. R. China
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19
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20
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Raab M, Becca JC, Heo J, Lim CK, Baev A, Jensen L, Prasad PN, Velarde L. Doubly resonant sum frequency spectroscopy of mixed photochromic isomers on surfaces reveals conformation-specific vibronic effects. J Chem Phys 2019; 150:114704. [DOI: 10.1063/1.5081726] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Micah Raab
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York 14260-3000, USA
- The Institute for Lasers, Photonics and Biophotonics, State University of New York at Buffalo, Buffalo, New York 14260, USA
| | - Jeffrey C. Becca
- Department of Chemistry, The Pennsylvania State University, 104 Chemistry Building, University Park, Pennsylvania 16802, USA
| | - Jeongyun Heo
- The Institute for Lasers, Photonics and Biophotonics, State University of New York at Buffalo, Buffalo, New York 14260, USA
| | - Chang-Keun Lim
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York 14260-3000, USA
- The Institute for Lasers, Photonics and Biophotonics, State University of New York at Buffalo, Buffalo, New York 14260, USA
| | - Alexander Baev
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York 14260-3000, USA
- The Institute for Lasers, Photonics and Biophotonics, State University of New York at Buffalo, Buffalo, New York 14260, USA
| | - Lasse Jensen
- Department of Chemistry, The Pennsylvania State University, 104 Chemistry Building, University Park, Pennsylvania 16802, USA
| | - Paras N. Prasad
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York 14260-3000, USA
- The Institute for Lasers, Photonics and Biophotonics, State University of New York at Buffalo, Buffalo, New York 14260, USA
| | - Luis Velarde
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York 14260-3000, USA
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21
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Baiardi A, Bloino J, Barone V. Time-Dependent Formulation of Resonance Raman Optical Activity Spectroscopy. J Chem Theory Comput 2018; 14:6370-6390. [PMID: 30281300 DOI: 10.1021/acs.jctc.8b00488] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
In this work, we extend the theoretical framework recently developed for the simulation of resonance Raman (RR) spectra of medium-to-large sized systems to its chiral counterpart, namely, resonance Raman optical activity (RROA). The theory is based on a time-dependent (TD) formulation, with the transition tensors obtained as half-Fourier transforms of the appropriate cross-correlation functions. The implementation has been kept as general as possible, supporting adiabatic and vertical models for the PES representation, both in Cartesian and internal coordinates, with the possible inclusion of Herzberg-Teller (HT) effects. Thanks to the integration of this TD-RROA procedure within a general-purpose quantum-chemistry program, both solvation and leading anharmonicity effects can be included in an effective way. The implementation is validated on one of the smallest chiral molecule (methyloxirane). Practical applications are illustrated with three medium-size organic molecules (naproxen-OCD3, quinidine and 2-Br-hexahelicene), whose simulated spectra are compared to the corresponding experimental data.
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Affiliation(s)
- Alberto Baiardi
- Scuola Normale Superiore , piazza dei Cavalieri 7 , I-56126 Pisa , Italy
| | - Julien Bloino
- Scuola Normale Superiore , piazza dei Cavalieri 7 , I-56126 Pisa , Italy
| | - Vincenzo Barone
- Scuola Normale Superiore , piazza dei Cavalieri 7 , I-56126 Pisa , Italy
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22
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Treatment of Herzberg-Teller and non-Condon effects in optical spectra with Hierarchical Equations of Motion. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.08.026] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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23
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Chen F, Zhao X, Liang W. One- and two-photon absorption spectra of the yellow fluorescent protein citrine: effects of intramolecular electron-vibrational coupling and intermolecular interactions. Mol Phys 2018. [DOI: 10.1080/00268976.2018.1426130] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Fasheng Chen
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, Xiamen, China
- Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, China
| | - Xinyi Zhao
- Department of Science and Technology for Inspection, Xiamen Huaxia University, Xiamen, China
| | - WanZhen Liang
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, Xiamen, China
- Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, China
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24
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Bednarska J, Zaleśny R, Tian G, Murugan NA, Ågren H, Bartkowiak W. Nonempirical Simulations of Inhomogeneous Broadening of Electronic Transitions in Solution: Predicting Band Shapes in One- and Two-Photon Absorption Spectra of Chalcones. Molecules 2017; 22:E1643. [PMID: 28973973 PMCID: PMC6151831 DOI: 10.3390/molecules22101643] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Revised: 09/20/2017] [Accepted: 09/21/2017] [Indexed: 11/23/2022] Open
Abstract
We have examined several approaches relying on the Polarizable Embedding (PE) scheme to predict optical band shapes for two chalcone molecules in methanol solution. The PE-TDDFT and PERI-CC2 methods were combined with molecular dynamics simulations, where the solute geometry was kept either as rigid, flexible or partly-flexible (restrained) body. The first approach, termed RBMD-PE-TDDFT, was employed to estimate the inhomogeneous broadening for subsequent convolution with the vibrationally-resolved spectra of the molecule in solution determined quantum-mechanically (QM). As demonstrated, the RBMD-PE-TDDFT/QM-PCM approach delivers accurate band widths, also reproducing their correct asymmetric shapes. Further refinement can be obtained by the estimation of the inhomogeneous broadening using the RBMD-PERI-CC2 method. On the other hand, the remaining two approaches (FBMD-PE-TDDFT and ResBMD-PE-TDDFT), which lack quantum-mechanical treatment of molecular vibrations, lead to underestimated band widths. In this study, we also proposed a simple strategy regarding the rapid selection of the exchange-correlation functional for the simulations of vibrationally-resolved one- and two-photon absorption spectra based on two easy-to-compute metrics.
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Affiliation(s)
- Joanna Bednarska
- Department of Physical and Quantum Chemistry, Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland.
| | - Robert Zaleśny
- Department of Physical and Quantum Chemistry, Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland.
| | - Guangjun Tian
- Hebei Key Laboratory of Microstructural Material Physics, School of Science, Yanshan University, Qinhuangdao 066004, China.
| | - Natarajan Arul Murugan
- Division of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, SE-10691 Stockholm, Sweden.
| | - Hans Ågren
- Division of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, SE-10691 Stockholm, Sweden.
| | - Wojciech Bartkowiak
- Department of Physical and Quantum Chemistry, Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland.
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25
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Turley HK, Hu Z, Jensen L, Camden JP. Surface-Enhanced Resonance Hyper-Raman Scattering Elucidates the Molecular Orientation of Rhodamine 6G on Silver Colloids. J Phys Chem Lett 2017; 8:1819-1823. [PMID: 28383922 DOI: 10.1021/acs.jpclett.7b00498] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Herein, we utilize surface-enhanced hyper-Raman scattering (SEHRS) under resonance conditions to probe the adsorbate geometry of rhodamine 6G (R6G) on silver colloids. Our results show resonance SEHRS is highly sensitive to molecular orientation due to non-Condon effects, which do not appear in its linear counterpart surface-enhanced Raman scattering. Comparisons between simulated and measured SEHRS spectra reveal R6G adsorbs mostly perpendicular to the nanoparticle surface along the ethylamine groups with the xanthene ring oriented edgewise. Our results expand upon previous studies that rely on indirect, qualitative probes of R6G's orientation on plasmonic substrates. More importantly, this work represents the first determination of adsorbate geometry by SEHRS and opens up the possibility to study the orientation of single molecules in complex, plasmonic environments.
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Affiliation(s)
- Hubert K Turley
- Department of Chemistry and Biochemistry, University of Notre Dame , Notre Dame, Indiana 46556-5670, United States
| | - Zhongwei Hu
- Department of Chemistry, The Pennsylvania State University , 104 Chemistry Building, University Park, Pennsylvania 16802-4615, United States
| | - Lasse Jensen
- Department of Chemistry, The Pennsylvania State University , 104 Chemistry Building, University Park, Pennsylvania 16802-4615, United States
| | - Jon P Camden
- Department of Chemistry and Biochemistry, University of Notre Dame , Notre Dame, Indiana 46556-5670, United States
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26
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Hu Z, Jensen L. Importance of double-resonance effects in two-photon absorption properties of Au 25(SR) 18. Chem Sci 2017. [PMID: 28626569 PMCID: PMC5471455 DOI: 10.1039/c7sc00968b] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
We show that double-resonance effects for Au25(SR)18– are less pronounced and do not lead to significantly enhanced two-photon absorption cross-sections.
The two-photon absorption (TPA) cross-sections of small thiolate-protected gold clusters have been shown to be much larger than typical small organic molecules. In comparison with larger nanoparticles, their TPA cross-sections per gold atom are also found to be larger. Theoretical simulations have suggested that the large enhancement of these TPA cross-sections comes from a one-photon double-resonance mechanism. However, it remains difficult to simulate TPA cross-sections of thiolate-protected gold clusters due to their large system size and a high density of states. In this work, we report a time-dependent density functional theory (TDDFT) study of the TPA spectra of the Au25(SR)18– cluster based on a damped response theory formalism. Damped response theory enables a consistent treatment of on- and off-resonance molecular properties even for molecules with a high density of states, and thus is well-suited for studying the TPA properties of gold clusters. Our results indicate that the one- and two-photon double-resonance effect is much smaller than previously found, and thus is unlikely to be the main cause of the large TPA cross-sections found experimentally. The effect of symmetry breaking of the Au25(SR)18– cluster due to the ligands on the TPA cross-sections has been studied and was found to only slightly increase the cross-section. Furthermore, by comparing with larger nanoparticles we find that the TPA cross-section per gold atom scales linearly with the diameter of the particles, and that the Kerr non-linear response of the Au25(SR)18– cluster is on the same order as that of bulk gold films.
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Affiliation(s)
- Zhongwei Hu
- Department of Chemistry , The Pennsylvania State University , 104 Chemistry Building , University Park , Pennsylvania 16802 , USA .
| | - Lasse Jensen
- Department of Chemistry , The Pennsylvania State University , 104 Chemistry Building , University Park , Pennsylvania 16802 , USA .
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27
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Li JF, Zhang YJ, Ding SY, Panneerselvam R, Tian ZQ. Core-Shell Nanoparticle-Enhanced Raman Spectroscopy. Chem Rev 2017; 117:5002-5069. [PMID: 28271881 DOI: 10.1021/acs.chemrev.6b00596] [Citation(s) in RCA: 525] [Impact Index Per Article: 75.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Core-shell nanoparticles are at the leading edge of the hot research topics and offer a wide range of applications in optics, biomedicine, environmental science, materials, catalysis, energy, and so forth, due to their excellent properties such as versatility, tunability, and stability. They have attracted enormous interest attributed to their dramatically tunable physicochemical features. Plasmonic core-shell nanomaterials are extensively used in surface-enhanced vibrational spectroscopies, in particular, surface-enhanced Raman spectroscopy (SERS), due to the unique localized surface plasmon resonance (LSPR) property. This review provides a comprehensive overview of core-shell nanoparticles in the context of fundamental and application aspects of SERS and discusses numerous classes of core-shell nanoparticles with their unique strategies and functions. Further, herein we also introduce the concept of shell-isolated nanoparticle-enhanced Raman spectroscopy (SHINERS) in detail because it overcomes the long-standing limitations of material and morphology generality encountered in traditional SERS. We then explain the SERS-enhancement mechanism with core-shell nanoparticles, as well as three generations of SERS hotspots for surface analysis of materials. To provide a clear view for readers, we summarize various approaches for the synthesis of core-shell nanoparticles and their applications in SERS, such as electrochemistry, bioanalysis, food safety, environmental safety, cultural heritage, materials, catalysis, and energy storage and conversion. Finally, we exemplify about the future developments in new core-shell nanomaterials with different functionalities for SERS and other surface-enhanced spectroscopies.
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Affiliation(s)
- Jian-Feng Li
- State Key Laboratory for Physical Chemistry of Solid Surfaces, MOE Key Laboratory of Spectrochemical Analysis and Instrumentation, College of Chemistry and Chemical Engineering, iChEM, Xiamen University , Xiamen 361005, China.,Department of Physics, Xiamen University , Xiamen 361005, China
| | - Yue-Jiao Zhang
- State Key Laboratory for Physical Chemistry of Solid Surfaces, MOE Key Laboratory of Spectrochemical Analysis and Instrumentation, College of Chemistry and Chemical Engineering, iChEM, Xiamen University , Xiamen 361005, China
| | - Song-Yuan Ding
- State Key Laboratory for Physical Chemistry of Solid Surfaces, MOE Key Laboratory of Spectrochemical Analysis and Instrumentation, College of Chemistry and Chemical Engineering, iChEM, Xiamen University , Xiamen 361005, China
| | - Rajapandiyan Panneerselvam
- State Key Laboratory for Physical Chemistry of Solid Surfaces, MOE Key Laboratory of Spectrochemical Analysis and Instrumentation, College of Chemistry and Chemical Engineering, iChEM, Xiamen University , Xiamen 361005, China
| | - Zhong-Qun Tian
- State Key Laboratory for Physical Chemistry of Solid Surfaces, MOE Key Laboratory of Spectrochemical Analysis and Instrumentation, College of Chemistry and Chemical Engineering, iChEM, Xiamen University , Xiamen 361005, China
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28
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Hu W, Duan S, Luo Y. Theoretical modeling of surface and tip‐enhanced Raman spectroscopies. WIRES COMPUTATIONAL MOLECULAR SCIENCE 2016. [DOI: 10.1002/wcms.1293] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Wei Hu
- Department of Theoretical Chemistry and BiologySchool of Biotechnology, Royal Institute of Technology Stockholm Sweden
| | - Sai Duan
- Department of Theoretical Chemistry and BiologySchool of Biotechnology, Royal Institute of Technology Stockholm Sweden
| | - Yi Luo
- Department of Theoretical Chemistry and BiologySchool of Biotechnology, Royal Institute of Technology Stockholm Sweden
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical PhysicsUniversity of Science and Technology of China Hefei P. R. China
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29
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Hu Z, Chulhai DV, Jensen L. Simulating Surface-Enhanced Hyper-Raman Scattering Using Atomistic Electrodynamics-Quantum Mechanical Models. J Chem Theory Comput 2016; 12:5968-5978. [DOI: 10.1021/acs.jctc.6b00940] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Zhongwei Hu
- Department
of Chemistry, The Pennsylvania State University, 104 Chemistry Building, University Park, 16802, United States
| | - Dhabih V. Chulhai
- Department
of Chemistry, The Pennsylvania State University, 104 Chemistry Building, University Park, 16802, United States
| | - Lasse Jensen
- Department
of Chemistry, The Pennsylvania State University, 104 Chemistry Building, University Park, 16802, United States
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30
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Anda A, De Vico L, Hansen T, Abramavičius D. Absorption and Fluorescence Lineshape Theory for Polynomial Potentials. J Chem Theory Comput 2016; 12:5979-5989. [DOI: 10.1021/acs.jctc.6b00997] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- André Anda
- Department
of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100, København Ø, Denmark
| | - Luca De Vico
- Department
of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100, København Ø, Denmark
| | - Thorsten Hansen
- Department
of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100, København Ø, Denmark
| | - Darius Abramavičius
- Department
of Theoretical Physics, Vilnius University, Sauletekio ave. 9, Build. 3, LT-10222 Vilnius, Lithuania
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31
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Duan S, Tian G, Luo Y. Theory for Modeling of High Resolution Resonant and Nonresonant Raman Images. J Chem Theory Comput 2016; 12:4986-4995. [DOI: 10.1021/acs.jctc.6b00592] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Sai Duan
- Department
of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
| | - Guangjun Tian
- College
of Science, Yanshan University, Qinhuangdao 066004, China
| | - Yi Luo
- Department
of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
- Hefei
National Laboratory for Physical Science at the Microscale, Department
of Chemical Physics, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026 Anhui, China
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32
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Cerezo J, Martínez-Fernández L, Improta R, Santoro F. Vibronic approach to the calculation of the decay rate of the photoexcited charge-transfer state of Guanine–Cytosine stacked dimer in water solution. Theor Chem Acc 2016. [DOI: 10.1007/s00214-016-1955-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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33
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Mohammadpour M, Jamshidi Z. Comparative assessment of density functional methods for evaluating essential parameters to simulate SERS spectra within the excited state energy gradient approximation. J Chem Phys 2016; 144:194302. [DOI: 10.1063/1.4948813] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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34
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Santoro F, Jacquemin D. Going beyond the vertical approximation with time-dependent density functional theory. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2016. [DOI: 10.1002/wcms.1260] [Citation(s) in RCA: 121] [Impact Index Per Article: 15.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Fabrizio Santoro
- CNR-Consiglio Nazionale delle Ricerche; Istituto di Chimica dei Composti OrganoMetallici (ICCOM-CNR); Pisa Italy
| | - Denis Jacquemin
- CEISAM, UMR CNRS 6230; Université de Nantes; Nantes France
- Institut Universitaire de France; Paris France
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35
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Chulhai DV, Hu Z, Moore JE, Chen X, Jensen L. Theory of Linear and Nonlinear Surface-Enhanced Vibrational Spectroscopies. Annu Rev Phys Chem 2016; 67:541-64. [PMID: 27090843 DOI: 10.1146/annurev-physchem-040215-112347] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The vibrational spectroscopy of molecules adsorbed on metal nanoparticles can be enhanced by many orders of magnitude so that the detection and identification of single molecules are possible. The enhancement of most linear and nonlinear vibrational spectroscopies has been demonstrated. In this review, we discuss theoretical approaches to understanding linear and nonlinear surface-enhanced vibrational spectroscopies. A unified description of enhancement mechanisms classified as either electromagnetic or chemical in nature is presented. Emphasis is placed on understanding the spectral changes necessary for interpretation of linear and nonlinear surface-enhanced vibrational spectroscopies.
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Affiliation(s)
- Dhabih V Chulhai
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802;
| | - Zhongwei Hu
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802;
| | - Justin E Moore
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802;
| | - Xing Chen
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802;
| | - Lasse Jensen
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802;
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36
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Zaleśny R, Murugan NA, Tian G, Medved’ M, Ågren H. First-Principles Simulations of One- and Two-Photon Absorption Band Shapes of the Bis(BF2) Core Complex. J Phys Chem B 2016; 120:2323-32. [DOI: 10.1021/acs.jpcb.5b09726] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Robert Zaleśny
- Department of Physical and
Quantum Chemistry, Faculty of
Chemistry, Wrocław University of Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
| | - N. Arul Murugan
- Division of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, SE-10691 Stockholm, Sweden
| | - Guangjun Tian
- Division of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, SE-10691 Stockholm, Sweden
| | - Miroslav Medved’
- Department of Chemistry, Faculty of Natural Sciences, Matej Bel University, Tajovského 40, 974 01 Banská Bystrica, Slovak Republic
| | - Hans Ågren
- Division of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, SE-10691 Stockholm, Sweden
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37
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Hu Z, Autschbach J, Jensen L. Simulating Third-Order Nonlinear Optical Properties Using Damped Cubic Response Theory within Time-Dependent Density Functional Theory. J Chem Theory Comput 2016; 12:1294-304. [DOI: 10.1021/acs.jctc.5b01060] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Zhongwei Hu
- Department
of Chemistry, The Pennsylvania State University, 104 Chemistry Building, University Park, Pennsylvania 16802-4615, United States
| | - Jochen Autschbach
- Department
of Chemistry, University at Buffalo, State University of New York, Buffalo, New York 14260-3000, United States
| | - Lasse Jensen
- Department
of Chemistry, The Pennsylvania State University, 104 Chemistry Building, University Park, Pennsylvania 16802-4615, United States
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38
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Guthmuller J. Comparison of simplified sum-over-state expressions to calculate resonance Raman intensities including Franck-Condon and Herzberg-Teller effects. J Chem Phys 2016; 144:064106. [DOI: 10.1063/1.4941449] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Affiliation(s)
- Julien Guthmuller
- Faculty of Applied Physics and Mathematics, Gdańsk University of Technology, Narutowicza 11/12, 80-233 Gdańsk, Poland
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39
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Simmons PD, Turley HK, Silverstein DW, Jensen L, Camden JP. Surface-Enhanced Spectroscopy for Higher-Order Light Scattering: A Combined Experimental and Theoretical Study of Second Hyper-Raman Scattering. J Phys Chem Lett 2015; 6:5067-5071. [PMID: 26624922 DOI: 10.1021/acs.jpclett.5b02342] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Motivated to explore the ultimate limits of surface-enhanced nonlinear spectroscopies, we report on the first observation of molecular second hyper-Raman scattering with the aid of surface enhancement and provide a new theoretical framework for first-principles calculations of the second hyper-Raman effect. Second hyper-Raman enhancement factors, determined to be a minimum of 10(5) times stronger than those in Raman scattering, demonstrate a clear trend toward larger enhancements for nonlinear phenomena, and the nearly quantitative agreement between simulation and experiment provides a unique spectroscopic window into higher-order molecular responses.
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Affiliation(s)
- Philip D Simmons
- Department of Chemistry, University of Tennessee , Knoxville, Tennessee 37996, United States
| | - Hubert K Turley
- Department of Chemistry and Biochemistry, University of Notre Dame , Notre Dame, Indiana 46556, United States
| | - Daniel W Silverstein
- Department of Chemistry, Pennsylvania State University , University Park, Pennsylvania 16802, United States
| | - Lasse Jensen
- Department of Chemistry, Pennsylvania State University , University Park, Pennsylvania 16802, United States
| | - Jon P Camden
- Department of Chemistry and Biochemistry, University of Notre Dame , Notre Dame, Indiana 46556, United States
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40
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Gong ZY, Tian G, Duan S, Luo Y. Significant Contributions of the Albrecht’s A Term to Nonresonant Raman Scattering Processes. J Chem Theory Comput 2015; 11:5385-90. [DOI: 10.1021/acs.jctc.5b00761] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Zu-Yong Gong
- Hefei
National Laboratory for Physical Science at the Microscale, Department
of Chemical Physics, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026 Anhui, People’s Republic of China
- Department
of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
| | - Guangjun Tian
- Department
of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
| | - Sai Duan
- Department
of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
| | - Yi Luo
- Hefei
National Laboratory for Physical Science at the Microscale, Department
of Chemical Physics, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026 Anhui, People’s Republic of China
- Department
of Theoretical Chemistry and Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
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41
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Zaleśny R, Baranowska-Łączkowska A, Medveď M, Luis JM. Comparison of Property-Oriented Basis Sets for the Computation of Electronic and Nuclear Relaxation Hyperpolarizabilities. J Chem Theory Comput 2015; 11:4119-28. [PMID: 26575907 DOI: 10.1021/acs.jctc.5b00434] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
In the present work, we perform an assessment of several property-oriented atomic basis sets in computing (hyper)polarizabilities with a focus on the vibrational contributions. Our analysis encompasses the Pol and LPol-ds basis sets of Sadlej and co-workers, the def2-SVPD and def2-TZVPD basis sets of Rappoport and Furche, and the ORP basis set of Baranowska-Łączkowska and Łączkowski. Additionally, we use the d-aug-cc-pVQZ and aug-cc-pVTZ basis sets of Dunning and co-workers to determine the reference estimates of the investigated electric properties for small- and medium-sized molecules, respectively. We combine these basis sets with ab initio post-Hartree-Fock quantum-chemistry approaches (including the coupled cluster method) to calculate electronic and nuclear relaxation (hyper)polarizabilities of carbon dioxide, formaldehyde, cis-diazene, and a medium-sized Schiff base. The primary finding of our study is that, among all studied property-oriented basis sets, only the def2-TZVPD and ORP basis sets yield nuclear relaxation (hyper)polarizabilities of small molecules with average absolute errors less than 5.5%. A similar accuracy for the nuclear relaxation (hyper)polarizabilites of the studied systems can also be reached using the aug-cc-pVDZ basis set (5.3%), although for more accurate calculations of vibrational contributions, i.e., average absolute errors less than 1%, the aug-cc-pVTZ basis set is recommended. It was also demonstrated that anharmonic contributions to first and second hyperpolarizabilities of a medium-sized Schiff base are particularly difficult to accurately predict at the correlated level using property-oriented basis sets. For instance, the value of the nuclear relaxation first hyperpolarizability computed at the MP2/def2-TZVPD level of theory is roughly 3 times larger than that determined using the aug-cc-pVTZ basis set. We link the failure of the def2-TZVPD basis set with the difficulties in predicting the first-order field-induced coordinates. On the other hand, the aug-cc-pVDZ and ORP basis sets overestimate the property in question only by roughly 30%. In this study, we also propose a low-cost composite treatment of anharmonicity that relies on the combination of two basis sets, i.e., a large-sized basis set is employed to determine lowest-order derivatives with respect to the field-induced coordinates, and a medium-sized basis set is used to compute the higher-order derivatives. The results of calculations performed at the MP2 level of theory demonstrate that this approximate scheme is very successful at predicting nuclear relaxation hyperpolarizabilities.
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Affiliation(s)
- Robert Zaleśny
- Department of Chemistry, Faculty of Natural Sciences, Matej Bel University , Tajovského 40, 974 01 Banská Bystrica, Slovak Republic.,Department of Physical and Quantum Chemistry, Faculty of Chemistry, Wrocław University of Technology , Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
| | | | - Miroslav Medveď
- Department of Chemistry, Faculty of Natural Sciences, Matej Bel University , Tajovského 40, 974 01 Banská Bystrica, Slovak Republic
| | - Josep M Luis
- Institute of Computational Chemistry and Catalysis and Department of Chemistry, University of Girona , Campus de Montilivi, 17071 Girona, Catalonia, Spain
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42
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Zheng RH, Wei WM, Shi Q. A theoretical study of sum-frequency generation for chiral solutions near electronic resonance. Phys Chem Chem Phys 2015; 17:20296-300. [PMID: 26190400 DOI: 10.1039/c5cp02136g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We present a method of calculating sum-frequency generation (SFG) for chiral solutions near electronic resonance including the vibronic contributions, which give reasonable SFG intensities and show the Franck-Condon progressions for SFG. When studying R-1,1'-bi-2-naphthol (R-BN), we found that the calculated spectrum is in good agreement with the experimental one (Phys. Rev. Lett., 2001, 87, 113001). Then we apply this method to investigate SFG for chiral arabinose solutions. Theoretical results show that it may be difficult to observe the corresponding SFG even when the sum-frequency is exactly in resonance with the low-lying excited electronic states. Furthermore, we discuss the reason why SFG of chiral arabinose solutions is small.
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Affiliation(s)
- Ren-hui Zheng
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, P. R. China.
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43
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Barton D, König C, Neugebauer J. Vibronic-structure tracking: a shortcut for vibrationally resolved UV/Vis-spectra calculations. J Chem Phys 2015; 141:164115. [PMID: 25362280 DOI: 10.1063/1.4898665] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The vibrational coarse structure and the band shapes of electronic absorption spectra are often dominated by just a few molecular vibrations. By contrast, the simulation of the vibronic structure even in the simplest theoretical models usually requires the calculation of the entire set of normal modes of vibration. Here, we exploit the idea of the mode-tracking protocol [M. Reiher and J. Neugebauer, J. Chem. Phys. 118, 1634 (2003)] in order to directly target and selectively calculate those normal modes which have the largest effect on the vibronic band shape for a certain electronic excitation. This is achieved by defining a criterion for the importance of a normal mode to the vibrational progressions in the absorption band within the so-called "independent mode, displaced harmonic oscillator" (IMDHO) model. We use this approach for a vibronic-structure investigation for several small test molecules as well as for a comparison of the vibronic absorption spectra of a truncated chlorophyll a model and the full chlorophyll a molecule. We show that the method allows to go beyond the often-used strategy to simulate absorption spectra based on broadened vertical excitation peaks with just a minimum of computational effort, which in case of chlorophyll a corresponds to about 10% of the cost for a full simulation within the IMDHO approach.
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Affiliation(s)
- Dennis Barton
- Theoretische Organische Chemie, Organisch-Chemisches Institut and Center for Multiscale Theory and Computation, Westfälische Wilhelms-Universität Münster, Corrensstraße 40, 48149 Münster, Germany
| | - Carolin König
- Theoretische Organische Chemie, Organisch-Chemisches Institut and Center for Multiscale Theory and Computation, Westfälische Wilhelms-Universität Münster, Corrensstraße 40, 48149 Münster, Germany
| | - Johannes Neugebauer
- Theoretische Organische Chemie, Organisch-Chemisches Institut and Center for Multiscale Theory and Computation, Westfälische Wilhelms-Universität Münster, Corrensstraße 40, 48149 Münster, Germany
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44
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Baiardi A, Bloino J, Barone V. Accurate Simulation of Resonance-Raman Spectra of Flexible Molecules: An Internal Coordinates Approach. J Chem Theory Comput 2015; 11:3267-80. [DOI: 10.1021/acs.jctc.5b00241] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Alberto Baiardi
- Scuola Normale Superiore, Piazza
dei Cavalieri 7, I-56126 Pisa, Italy
| | - Julien Bloino
- Scuola Normale Superiore, Piazza
dei Cavalieri 7, I-56126 Pisa, Italy
- Consiglio Nazionale delle Ricerche, Istituto di Chimica dei Composti OrganoMetallici (ICCOM-CNR), UOS di Pisa, Area della Ricerca CNR, Via G. Moruzzi 1, I-56124 Pisa, Italy
| | - Vincenzo Barone
- Scuola Normale Superiore, Piazza
dei Cavalieri 7, I-56126 Pisa, Italy
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45
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Zaleśny R, Tian G, Hättig C, Bartkowiak W, Ågren H. Toward assessment of density functionals for vibronic coupling in two-photon absorption: A case study of 4-nitroaniline. J Comput Chem 2015; 36:1124-31. [DOI: 10.1002/jcc.23903] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2014] [Revised: 02/24/2015] [Accepted: 02/28/2015] [Indexed: 12/13/2022]
Affiliation(s)
- Robert Zaleśny
- Department of Physical and Quantum Chemistry, Faculty of Chemistry; Wrocław University of Technology; Wyb. Wyspiańskiego 27 PL-50370 Wrocław Poland
- Division of Theoretical Chemistry and Biology; School of Biotechnology, Royal Institute of Technology; SE-10691 Stockholm Sweden
| | - Guangjun Tian
- Division of Theoretical Chemistry and Biology; School of Biotechnology, Royal Institute of Technology; SE-10691 Stockholm Sweden
| | - Christof Hättig
- Lehrstuhl fuer Theoretische Chemie; Ruhr-Universität Bochum, Universitätsstrasse 150; D-44780 Bochum Germany
| | - Wojciech Bartkowiak
- Department of Physical and Quantum Chemistry, Faculty of Chemistry; Wrocław University of Technology; Wyb. Wyspiańskiego 27 PL-50370 Wrocław Poland
| | - Hans Ågren
- Division of Theoretical Chemistry and Biology; School of Biotechnology, Royal Institute of Technology; SE-10691 Stockholm Sweden
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46
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Petrone A, Cerezo J, Ferrer FJA, Donati G, Improta R, Rega N, Santoro F. Absorption and Emission Spectral Shapes of a Prototype Dye in Water by Combining Classical/Dynamical and Quantum/Static Approaches. J Phys Chem A 2015; 119:5426-38. [DOI: 10.1021/jp510838m] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Alessio Petrone
- Dipartimento di
Scienze Chimiche, Università di Napoli ‘Federico II’, Complesso Universitario di M.S. Angelo, via Cintia, I-80126 Napoli, Italy
| | - Javier Cerezo
- CNR−Consiglio
Nazionale delle Ricerche, Istituto di Chimica dei Composti Organometallici (ICCOM-CNR), UOS di Pisa, Area della Ricerca, via G. Moruzzi 1, I-56124 Pisa, Italy
| | - Francisco J. Avila Ferrer
- CNR−Consiglio
Nazionale delle Ricerche, Istituto di Chimica dei Composti Organometallici (ICCOM-CNR), UOS di Pisa, Area della Ricerca, via G. Moruzzi 1, I-56124 Pisa, Italy
- Physical Chemistry, Faculty of Science, University of Málaga, Málaga, 29071, Spain
| | - Greta Donati
- Dipartimento di
Scienze Chimiche, Università di Napoli ‘Federico II’, Complesso Universitario di M.S. Angelo, via Cintia, I-80126 Napoli, Italy
| | - Roberto Improta
- CNR−Consiglio
Nazionale delle Ricerche, Istituto di Biostrutture e Bioimmagini (IBB-CNR), via Mezzocannone 16, I-80136 Napoli, Italy
| | - Nadia Rega
- Dipartimento di
Scienze Chimiche, Università di Napoli ‘Federico II’, Complesso Universitario di M.S. Angelo, via Cintia, I-80126 Napoli, Italy
- Italian Institute
of Technology, IIT@CRIB Center for Advanced Biomaterials for Healthcare, Largo Barsanti e Matteucci, I-80125 Napoli, Italy
| | - Fabrizio Santoro
- CNR−Consiglio
Nazionale delle Ricerche, Istituto di Chimica dei Composti Organometallici (ICCOM-CNR), UOS di Pisa, Area della Ricerca, via G. Moruzzi 1, I-56124 Pisa, Italy
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47
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Cerezo J, Avila Ferrer FJ, Santoro F. Disentangling vibronic and solvent broadening effects in the absorption spectra of coumarin derivatives for dye sensitized solar cells. Phys Chem Chem Phys 2015; 17:11401-11. [DOI: 10.1039/c5cp00370a] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Individuation of vibronic and solvent contributions to the spectra of a family of coumarin dyes helps to understand the main differences in their lineshapes.
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Affiliation(s)
- Javier Cerezo
- CNR–Consiglio Nazionale delle Ricerche
- Istituto di Chimica dei Composti Organo Metallici (ICCOM-CNR)
- UOS di Pisa
- Area della Ricerca
- I-56124 Pisa
| | - Francisco J. Avila Ferrer
- CNR–Consiglio Nazionale delle Ricerche
- Istituto di Chimica dei Composti Organo Metallici (ICCOM-CNR)
- UOS di Pisa
- Area della Ricerca
- I-56124 Pisa
| | - Fabrizio Santoro
- CNR–Consiglio Nazionale delle Ricerche
- Istituto di Chimica dei Composti Organo Metallici (ICCOM-CNR)
- UOS di Pisa
- Area della Ricerca
- I-56124 Pisa
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48
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Zheng RH, Wei WM, Zhu LL, Shi Q. Theoretical study of the resonance Raman spectra for meso-tetrakis(3,5-di-tertiarybutylphenyl)-porphyrin. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 133:707-713. [PMID: 24996212 DOI: 10.1016/j.saa.2014.06.047] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2014] [Revised: 05/26/2014] [Accepted: 06/03/2014] [Indexed: 06/03/2023]
Abstract
Applying time-dependent density functional theory (TDDFT), we study the resonance Raman spectra for the Q and B bands of the meso-tetrakis(3,5-di-tertiarybutylphenyl)-porphyrin (H2TBPP) molecule including both Raman A term (Franck-Condon term) and Raman B term (Herzberg-Teller term) contributions. It is found that Raman B term can be one order of magnitude larger than Raman A term and dominates resonance Raman for the Q band resonance. In comparison with the recent experimental Raman spectra of H2TBPP with incident light frequency 532nm, we predict the absence of 1580cm(-1) band in the resonance Raman spectra which agrees well with the experimental results, whereas the previous theoretical calculation using non-resonance strategy failed to do so.
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Affiliation(s)
- Ren-hui Zheng
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, People's Republic of China.
| | - Wen-mei Wei
- Department of Chemistry, College of Basic Medicine, Anhui Medical University, Hefei, Anhui 230032, People's Republic of China
| | - Li-li Zhu
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, People's Republic of China
| | - Qiang Shi
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, People's Republic of China
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49
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Zaleśny R, Murugan NA, Gel’mukhanov F, Rinkevicius Z, Ośmiałowski B, Bartkowiak W, Ågren H. Toward Fully Nonempirical Simulations of Optical Band Shapes of Molecules in Solution: A Case Study of Heterocyclic Ketoimine Difluoroborates. J Phys Chem A 2014; 119:5145-52. [DOI: 10.1021/jp5094417] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
| | | | | | | | - Borys Ośmiałowski
- Faculty
of Chemical Technology and Engineering, UTP University of Science and Technology, Seminaryjna 3, PL-85326 Bydgoszcz, Poland
| | - Wojciech Bartkowiak
- Institute
of Physical and Theoretical Chemistry, Wroclaw University of Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
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50
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Ma H, Zhao Y, Liang W. Assessment of mode-mixing and Herzberg-Teller effects on two-photon absorption and resonance hyper-Raman spectra from a time-dependent approach. J Chem Phys 2014; 140:094107. [PMID: 24606353 DOI: 10.1063/1.4867273] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Abstract
A time-dependent approach is presented to simulate the two-photon absorption (TPA) and resonance hyper-Raman scattering (RHRS) spectra including Duschinsky rotation (mode-mixing) and Herzberg-Teller (HT) vibronic coupling effects. The computational obstacles for the excited-state geometries, vibrational frequencies, and nuclear derivatives of transition dipole moments, which enter the expressions of TPA and RHRS cross sections, are further overcome by the recently developed analytical excited-state energy derivative approaches in the framework of time-dependent density functional theory. The excited-state potential curvatures are evaluated at different levels of approximation to inspect the effects of frequency differences, mode-mixing and HT on TPA and RHRS spectra. Two types of molecules, one with high symmetry (formaldehyde, p-difluorobenzene, and benzotrifluoride) and the other with non-centrosymmetry (cis-hydroxybenzylidene-2,3-dimethylimidazolinone in the deprotonated anion state (HDBI(-))), are used as test systems. The calculated results reveal that it is crucial to adopt the exact excited-state potential curvatures in the calculations of TPA and RHRS spectra even for the high-symmetric molecules, and that the vertical gradient approximation leads to a large deviation. Furthermore, it is found that the HT contribution is evident in the TPA and RHRS spectra of HDBI(-) although its one- and two-photon transitions are strongly allowed, and its effect results in an obvious blueshift of the TPA maximum with respect to the one-photon absorption maximum. With the HT and solvent effects getting involved, the simulated blueshift of 1291 cm(-1) agrees well with the experimental measurement.
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Affiliation(s)
- HuiLi Ma
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, and Institute of Fujian Provincial Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, People's Republic of China
| | - Yi Zhao
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, and Institute of Fujian Provincial Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, People's Republic of China
| | - WanZhen Liang
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, and Institute of Fujian Provincial Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, People's Republic of China
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