Transient-time correlation function applied to mixed shear and elongational flows

Computing Accurate True Self-Diffusion Coefficients and Shear Viscosities Using the OrthoBoXY Approach

In a recent paper [Busch, J.; Paschek, D. J. Phys. Chem. B 2023, 127, 7983-7987], we have shown that for molecular dynamics (MD) simulations using orthorhombic periodic boundary conditions with "magic" box length ratios of Lz/Lx = Lz/Ly = 2.7933596497, the self-diffusion coefficients Dx and Dy in x- and y-directions are independent of the system size. They both represent the true self-diffusion coefficient D0 = (Dx + Dy)/2, while the shear viscosity can be calculated from diffusion coefficients in x-, y-, and z-directions, using η = kBT·8.1711245653/[3πLz(Dx + Dy - 2Dz)]. In this contribution, we test this "OrthoBoXY" approach by its application to a variety of different systems: liquid water, dimethyl ether, methanol, triglyme, water/methanol mixtures, water/triglyme mixtures, and imidazolium-based ionic liquids. The chosen systems range from small-sized molecular liquids to complex mixtures and ionic liquids, while spanning a viscosity range of almost 3 orders of magnitude. We assess the efficiency of the method for computing true self-diffusion and viscosity data and provide simple formulas for estimating the required MD simulation lengths and sizes for delivering reliable data with targeted uncertainty levels. Our analysis of the system size dependence of statistical uncertainties for both the viscosity and the self-diffusion coefficient leads us to the conclusion that it is preferable to extend the simulation length instead of increasing the system size. MD simulations consisting of 768 molecules or ion pairs seem to be perfectly adequate.

Slip and stress from low shear rate nonequilibrium molecular dynamics: The transient-time correlation function technique

We derive the transient-time correlation function (TTCF) expression for the computation of phase variables of inhomogenous confined atomistic fluids undergoing boundary-driven planar shear (Couette) flow at constant pressure. Using nonequilibrium molecular dynamics simulations, we then apply the TTCF formalism to the computation of the shear stress and the slip velocity for atomistic fluids at realistic low shear rates, in systems under constant pressure and constant volume. We show that, compared to direct averaging of multiple trajectories, the TTCF method dramatically improves the accuracy of the results at low shear rates and that it is suitable to investigate the tribology and rheology of atomistically detailed confined fluids at realistic flow rates.

Shear Viscosity Computed from the Finite-Size Effects of Self-Diffusivity in Equilibrium Molecular Dynamics

A method is proposed for calculating the shear viscosity of a liquid from finite-size effects of self-diffusion coefficients in Molecular Dynamics simulations. This method uses the difference in the self-diffusivities, computed from at least two system sizes, and an analytic equation to calculate the shear viscosity. To enable the efficient use of this method, a set of guidelines is developed. The most efficient number of system sizes is two and the large system is at least four times the small system. The number of independent simulations for each system size should be assigned in such a way that 50%–70% of the total available computational resources are allocated to the large system. We verified the method for 250 binary and 26 ternary Lennard-Jones systems, pure water, and an ionic liquid ([Bmim][Tf₂N]). The computed shear viscosities are in good agreement with viscosities obtained from equilibrium Molecular Dynamics simulations for all liquid systems far from the critical point. Our results indicate that the proposed method is suitable for multicomponent mixtures and highly viscous liquids. This may enable the systematic screening of the viscosities of ionic liquids and deep eutectic solvents.

Transient behavior of a model fluid under applied shear

We study the transient behavior of a model fluid composed by soft repulsive spheres subjected to a planar uniform shear. To this aim, we use a dynamical non-equilibrium molecular dynamics method originally developed by Ciccotti and Jacucci [Phys. Rev. Lett. 35, 789 (1975)] and recently applied to the study of the transient regimes in various fluid systems. We show that the dynamical method allows one to study the transient behavior of the viscous time-dependent response over a wide range of applied shear rates, provided that a temperature control is enforced on the system. In this study, we adopt in particular the configurational thermostat of Braga and Travis [J. Chem. Phys. 123, 134101 (2005)]. The initial behavior of the dynamical response to a θ-like perturbation is characterized by a rapid increase, culminating in a pronounced peak, later relaxing to a plateau value. The latter positively reproduces the values of the viscosity observed in standard steady-state non-equilibrium molecular dynamics.