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Lucco Castello F, Tolias P. Bridge functions of classical one-component plasmas. Phys Rev E 2022; 105:015208. [PMID: 35193199 DOI: 10.1103/physreve.105.015208] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2021] [Accepted: 01/10/2022] [Indexed: 06/14/2023]
Abstract
In a recent paper, Lucco Castello et al. [arXiv:2107.03537] performed systematic extractions of classical one-component plasma bridge functions from molecular dynamics simulations and provided an accurate parametrization that was incorporated in their isomorph-based empirically modified hypernetted chain approach for Yukawa one-component plasmas. Here the extraction technique and parametrization strategy are described in detail, while the deficiencies of earlier efforts are discussed. The structural and thermodynamic predictions of the updated version of the integral equation theory approach are compared with extensive available simulation results revealing a truly unprecedented level of accuracy in the entire dense liquid region of the Yukawa phase diagram.
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Affiliation(s)
- F Lucco Castello
- Space and Plasma Physics, Royal Institute of Technology, Stockholm SE-100 44, Sweden
| | - P Tolias
- Space and Plasma Physics, Royal Institute of Technology, Stockholm SE-100 44, Sweden
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2
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Nakamura Y, Yoshimori A, Akiyama R. Solvation effects on diffusion processes of a macromolecule: Accuracy required for radial distribution function to calculate diffusion coefficient. J Chem Phys 2021; 154:084501. [PMID: 33639733 DOI: 10.1063/5.0038894] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We investigate the dependence of the diffusion coefficient of a large solute particle on the solvation structure around a solute. The diffusion coefficient of a hard-sphere system is calculated by using a perturbation theory of large-particle diffusion with radial distribution functions around the solute. To obtain the radial distribution function, some integral equation theories are examined, such as the Percus-Yevick (PY), hypernetted-chain (HNC), and modified HNC theories using a bridge function proposed by Kinoshita (MHNC) closures. In one-component solvent systems, the diffusion coefficient depends on the first-minimum value of the radial distribution function. The results of the MHNC closure are in good agreement with those of calculation using the radial distribution functions of Monte Carlo simulations since the MHNC closure very closely reproduces the radial distribution function of Monte Carlo simulations. In binary-solvent mixtures, the diffusion coefficient is affected by the larger solvent density distribution in the short-range part, particularly the height and sharpness of the first peak and the depth of the first minimum. Since the HNC closure gives the first peak that is higher and sharper than that of the MHNC closure, the calculated diffusion coefficient is smaller than the MHNC closure result. In contrast, the results of the PY closure are qualitatively and quantitatively different from those of the MHNC and HNC closures.
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Affiliation(s)
- Yuka Nakamura
- Interdisciplinary Program of Biomedical Engineering, Assistive Technology, and Art and Sports Sciences, Faculty of Engineering, Niigata University, Niigata 950-2181, Japan
| | - Akira Yoshimori
- Department of Physics, Niigata University, Niigata 950-2181, Japan
| | - Ryo Akiyama
- Department of Chemistry, Kyushu University, Fukuoka 819-0395, Japan
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Lucco Castello F, Tolias P. Theoretical Estimate of the Glass Transition Line of Yukawa One-Component Plasmas. Molecules 2021; 26:molecules26030669. [PMID: 33525346 PMCID: PMC7865523 DOI: 10.3390/molecules26030669] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 01/07/2021] [Accepted: 01/25/2021] [Indexed: 12/04/2022] Open
Abstract
The mode coupling theory of supercooled liquids is combined with advanced closures to the integral equation theory of liquids in order to estimate the glass transition line of Yukawa one-component plasmas from the unscreened Coulomb limit up to the strong screening regime. The present predictions constitute a major improvement over the current literature predictions. The calculations confirm the validity of an existing analytical parameterization of the glass transition line. It is verified that the glass transition line is an approximate isomorphic curve and the value of the corresponding reduced excess entropy is estimated. Capitalizing on the isomorphic nature of the glass transition line, two structural vitrification indicators are identified that allow a rough estimate of the glass transition point only through simple curve metrics of the static properties of supercooled liquids. The vitrification indicators are demonstrated to be quasi-universal by an investigation of hard sphere and inverse power law supercooled liquids. The straightforward extension of the present results to bi-Yukawa systems is also discussed.
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Lucco Castello F, Tolias P, Dyre JC. Testing the isomorph invariance of the bridge functions of Yukawa one-component plasmas. J Chem Phys 2021; 154:034501. [PMID: 33499616 DOI: 10.1063/5.0036226] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
It has been recently conjectured that bridge functions remain nearly invariant along phase diagram lines of constant excess entropy for the broad class of R-simple liquids. To test this hypothesis, the bridge functions of Yukawa systems are computed outside the correlation void with the Ornstein-Zernike inversion method employing structural input from ultra-accurate molecular dynamics simulations and inside the correlation void with the cavity distribution method employing structural input from ultra-long specially designed molecular dynamics simulations featuring a tagged particle pair. Yukawa bridge functions are revealed to be isomorph invariant to a very high degree. The observed invariance is not exact, however, since isomorphic deviations exceed the overall uncertainties.
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Affiliation(s)
- F Lucco Castello
- Space and Plasma Physics, Royal Institute of Technology, Stockholm SE-100 44, Sweden
| | - P Tolias
- Space and Plasma Physics, Royal Institute of Technology, Stockholm SE-100 44, Sweden
| | - J C Dyre
- Glass and Time, IMFUFA, Roskilde University, Roskilde DK-4000, Denmark
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Nakamura Y, Arai S, Kinoshita M, Yoshimori A, Akiyama R. Reduced density profile of small particles near a large particle: Results of an integral equation theory with an accurate bridge function and a Monte Carlo simulation. J Chem Phys 2019; 151:044506. [PMID: 31370562 DOI: 10.1063/1.5100040] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Solute-solvent reduced density profiles of hard-sphere fluids were calculated by using several integral equation theories for liquids. The traditional closures, Percus-Yevick (PY) and the hypernetted-chain (HNC) closures, as well as the theories with bridge functions, Verlet, Duh-Henderson, and Kinoshita (named MHNC), were used for the calculation. In this paper, a one-solute hard-sphere was immersed in a one-component hard-sphere solvent and various size ratios were examined. The profiles between the solute and solvent particles were compared with those calculated by Monte Carlo simulations. The profiles given by the integral equations with the bridge functions were much more accurate than those calculated by conventional integral equation theories, such as the Ornstein-Zernike (OZ) equation with the PY closure. The accuracy of the MHNC-OZ theory was maintained even when the particle size ratio of solute to solvent was 50. For example, the contact values were 5.7 (Monte Carlo), 5.6 (MHNC), 7.8 (HNC), and 4.5 (PY), and the first minimum values were 0.48 (Monte Carlo), 0.46 (MHNC), 0.54 (HNC), and 0.40 (PY) when the packing fraction of the hard-sphere solvent was 0.38 and the size ratio was 50. The asymptotic decay and the oscillation period for MHNC-OZ were also very accurate, although those given by the HNC-OZ theory were somewhat faster than those obtained by Monte Carlo simulations.
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Affiliation(s)
- Yuka Nakamura
- Department of Engineering Science, The University of Electro-Communications, Tokyo 182-8585, Japan
| | - Shota Arai
- Department of Physics, Niigata University, Niigata 950-2181, Japan
| | | | - Akira Yoshimori
- Department of Physics, Niigata University, Niigata 950-2181, Japan
| | - Ryo Akiyama
- Department of Chemistry, Kyushu University, Fukuoka 819-0395, Japan
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Zhou Y, Schweizer KS. Local structure, thermodynamics, and phase behavior of asymmetric particle mixtures: Comparison between integral equation theories and simulation. J Chem Phys 2019; 150:214902. [PMID: 31176349 DOI: 10.1063/1.5099369] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Affiliation(s)
- Yuxing Zhou
- Department of Materials Science, University of Illinois, 1304 West Green Street, Urbana, Illinois 61801-3028, USA
- Materials Research Laboratory, University of Illinois, 1304 West Green Street, Urbana, Illinois 61801-3028, USA
| | - Kenneth S. Schweizer
- Department of Materials Science, University of Illinois, 1304 West Green Street, Urbana, Illinois 61801-3028, USA
- Materials Research Laboratory, University of Illinois, 1304 West Green Street, Urbana, Illinois 61801-3028, USA
- Department of Chemical and Biomolecular Engineering, University of Illinois, 1304 West Green Street, Urbana, Illinois 61801-3028, USA
- Department of Chemistry, University of Illinois, 1304 West Green Street, Urbana, Illinois 61801-3028, USA
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Tsednee T, Luchko T. Closure for the Ornstein-Zernike equation with pressure and free energy consistency. Phys Rev E 2019; 99:032130. [PMID: 30999429 DOI: 10.1103/physreve.99.032130] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Indexed: 06/09/2023]
Abstract
The Ornstein-Zernike (OZ) integral equation theory is a powerful approach to simple liquids due to its low computational cost and the fact that, when combined with an appropriate closure equation, the theory is thermodynamically complete. However, approximate closures proposed to date exhibit pressure or free energy inconsistencies that produce inaccurate or ambiguous results, limiting the usefulness of the Ornstein-Zernike approach. To address this problem, we combine methods to enforce both pressure and free energy consistency to create a new closure approximation and test it for a single-component Lennard-Jones fluid. The closure is a simple power series in the direct and total correlation functions for which we have derived analytical formulas for the excess Helmholtz free energy and chemical potential. These expressions contain a partial molar volumelike term, similar to excess chemical potential correction terms recently developed. Using our bridge approximation, we have calculated the pressure, Helmholtz free energy, and chemical potential for the Lennard-Jones fluid using the Kirkwood charging, thermodynamic integration techniques, and analytic expressions. These results are compared with those from the hypernetted chain equation and the Verlet-modified closure against Monte Carlo and equations-of-state data for reduced densities of ρ^{*}<1 and temperatures of T^{*}=1.5, 2.74, and 5. Our closure shows consistency among all thermodynamic paths, except for one expression of the Gibbs-Duhem relation, whereas the hypernetted chain equation and the Verlet-modified closure exhibit consistency between only a few relations. Accuracy of the closure is comparable to the Verlet-modified closure and a significant improvement to results obtained from the hypernetted chain equation.
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Affiliation(s)
- Tsogbayar Tsednee
- Department of Physics and Astronomy, California State University Northridge, 18111 Nordhoff Street, Northridge, California 91330, USA
| | - Tyler Luchko
- Department of Physics and Astronomy, California State University Northridge, 18111 Nordhoff Street, Northridge, California 91330, USA
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8
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Kinoshita M, Hayashi T. Entropic enrichment of cosolvent near a very large solute immersed in solvent-cosolvent binary mixture: Anomalous dependence on bulk cosolvent concentration. J Mol Liq 2017. [DOI: 10.1016/j.molliq.2017.09.108] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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9
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Dyer KM, Perkyns JS, Pettitt BM. Dielectric behavior for saline solutions from renormalized diagrammatically proper interaction site model theory. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2016; 28:414006. [PMID: 27546725 PMCID: PMC5340275 DOI: 10.1088/0953-8984/28/41/414006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
We consider the dielectric response of angularly dependent site-site theories for models of aqueous saline solutions. We find that we can use relatively low order approximations of the angularly dependent correlation functions with correct long ranged behavior to obtain good estimates of the dielectric constant for three site water models and simple 1-1 salts. We find that the solution thermodynamics results for this level of theory, as measured by the Kirkwood G integrals and the excess chemical potentials, are in good quantitative agreement with simulation even when the details of the short ranged structure is not as accurately determined. We find that the dielectric constant predictions of both the pure fluid and the salt-water mixtures are similarly predictive, in comparison to both simulation and experiment.
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Affiliation(s)
- Kippi M Dyer
- Department of Biochemistry and Molecular Biology, Sealy Center for Structural Biology and Molecular Biophysics, UTMB-Galveston, 301 University Boulevard, Galveston, TX 77555-03004, USA
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Dyer KM, Perkyns JS, Pettitt BM. Solubility Limits in Lennard-Jones Mixtures: Effects of Disparate Molecule Geometries. J Phys Chem B 2015; 119:9450-9. [PMID: 25621892 DOI: 10.1021/jp512992n] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
In order to better understand general effects of the size and energy disparities between macromolecules and solvent molecules in solution, especially for macromolecular constructs self-assembled from smaller molecules, we use the first- and second-order exact bridge diagram extensions of the HNC integral equation theory to investigate single-component, binary, ternary, and quaternary mixtures of Lennard-Jones fluids. For pure fluids, we find that the HNCH3 bridge function integral equation (i.e., exact to third order in density) is necessary to quantitatively predict the pure gas and pure liquid sides of the coexistence region of the phase diagram of the Lennard-Jones fluid. For the mixtures, we find that the HNCH2 bridge function integral equation is sufficient to qualitatively predict solubility in the binary, ternary, and quaternary mixtures, up to the nominal solubility limit. The results, as limiting cases, should be useful to several problems, including accurate phase diagram predictions for complex mixtures, design of self-assembling nanostructures via solvent controls, and the solvent contributions to the conformational behavior of macromolecules in complex fluids.
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Affiliation(s)
- Kippi M Dyer
- Sealy Center for Structural Biology and Molecular Biophysics, Department of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas 77555-0304, United States
| | - John S Perkyns
- Sealy Center for Structural Biology and Molecular Biophysics, Department of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas 77555-0304, United States
| | - B Montgomery Pettitt
- Sealy Center for Structural Biology and Molecular Biophysics, Department of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas 77555-0304, United States
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11
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Depletion forces in bulk and in confined domains: From Asakura–Oosawa to recent statistical physics advances. Curr Opin Colloid Interface Sci 2015. [DOI: 10.1016/j.cocis.2014.12.004] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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12
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Mishima H, Oshima H, Yasuda S, Amano KI, Kinoshita M. On the physics of multidrug efflux through a biomolecular complex. J Chem Phys 2013; 139:205102. [DOI: 10.1063/1.4832896] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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13
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Mills EA, Plotkin SS. Density functional theory for protein transfer free energy. J Phys Chem B 2013; 117:13278-90. [PMID: 23944753 DOI: 10.1021/jp403600q] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
We cast the problem of protein transfer free energy within the formalism of density functional theory (DFT), treating the protein as a source of external potential that acts upon the solvent. Solvent excluded volume, solvent-accessible surface area, and temperature dependence of the transfer free energy all emerge naturally within this formalism, and may be compared with simplified "back of the envelope" models, which are also developed here. Depletion contributions to osmolyte induced stability range from 5 to 10 kBT for typical protein lengths. The general DFT transfer theory developed here may be simplified to reproduce a Langmuir isotherm condensation mechanism on the protein surface in the limits of short-ranged interactions, and dilute solute. Extending the equation of state to higher solute densities results in non-monotonic behavior of the free energy driving protein or polymer collapse. Effective interaction potentials between protein backbone or side chains and TMAO are obtained, assuming a simple backbone/side chain two-bead model for the protein with an effective 6-12 potential with the osmolyte. The transfer free energy δg shows significant entropy: d(δg)/dT ≈ 20 kB for a 100-residue protein. The application of DFT to effective solvent forces for use in implicit-solvent molecular dynamics is also developed. The simplest DFT expressions for implicit-solvent forces contain both depletion interactions and an "impeded-solvation" repulsive force at larger distances.
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Affiliation(s)
- Eric A Mills
- Department of Physics & Astronomy, University of British Columbia , Vancouver, British Columbia V6T1Z4, Canada
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14
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Zhao S, Liu H, Ramirez R, Borgis D. Accurate evaluation of the angular-dependent direct correlation function of water. J Chem Phys 2013; 139:034503. [DOI: 10.1063/1.4813400] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023] Open
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15
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16
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Puibasset J, Belloni L. Bridge function for the dipolar fluid from simulation. J Chem Phys 2012; 136:154503. [DOI: 10.1063/1.4703899] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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17
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Bertolini D, Cinacchi G, Tani A. On the Distribution Functions of Depletion Interactions. J Phys Chem B 2011; 115:6608-15. [DOI: 10.1021/jp2005259] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Davide Bertolini
- Istituto per i Processi Chimico-Fisici, Consiglio Nazionale delle Ricerche, Via G. Moruzzi 1, I-56124 Pisa, Italy
| | - Giorgio Cinacchi
- School of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, England
| | - Alessandro Tani
- Dipartimento di Chimica, Università di Pisa, Via Risorgimento 35, I-56126 Pisa, Italy
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18
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Amano KI, Yoshidome T, Iwaki M, Suzuki M, Kinoshita M. Entropic potential field formed for a linear-motor protein near a filament: Statistical-mechanical analyses using simple models. J Chem Phys 2010; 133:045103. [PMID: 20687691 DOI: 10.1063/1.3462279] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
We report a new progress in elucidating the mechanism of the unidirectional movement of a linear-motor protein (e.g., myosin) along a filament (e.g., F-actin). The basic concept emphasized here is that a potential field is entropically formed for the protein on the filament immersed in solvent due to the effect of the translational displacement of solvent molecules. The entropic potential field is strongly dependent on geometric features of the protein and the filament, their overall shapes as well as details of the polyatomic structures. The features and the corresponding field are judiciously adjusted by the binding of adenosine triphosphate (ATP) to the protein, hydrolysis of ATP into adenosine diphosphate (ADP)+Pi, and release of Pi and ADP. As the first step, we propose the following physical picture: The potential field formed along the filament for the protein without the binding of ATP or ADP+Pi to it is largely different from that for the protein with the binding, and the directed movement is realized by repeated switches from one of the fields to the other. To illustrate the picture, we analyze the spatial distribution of the entropic potential between a large solute and a large body using the three-dimensional integral equation theory. The solute is modeled as a large hard sphere. Two model filaments are considered as the body: model 1 is a set of one-dimensionally connected large hard spheres and model 2 is a double helical structure formed by two sets of connected large hard spheres. The solute and the filament are immersed in small hard spheres forming the solvent. The major findings are as follows. The solute is strongly confined within a narrow space in contact with the filament. Within the space there are locations with sharply deep local potential minima along the filament, and the distance between two adjacent locations is equal to the diameter of the large spheres constituting the filament. The potential minima form a ringlike domain in model 1 while they form a pointlike one in model 2. We then examine the effects of geometric features of the solute on the amplitudes and asymmetry of the entropic potential field acting on the solute along the filament. A large aspherical solute with a cleft near the solute-filament interface, which mimics the myosin motor domain, is considered in the examination. Thus, the two fields in our physical picture described above are qualitatively reproduced. The factors to be taken into account in further studies are also discussed.
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Affiliation(s)
- Ken-Ichi Amano
- Graduate School of Energy Science, Kyoto University, Uji, Kyoto 611-0011, Japan
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20
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Abstract
It has been recently argued that depletion attraction may play an important role in different aspects of cellular organization, ranging from the organization of transcriptional activity in transcription factories to the formation of nuclear bodies. In this paper, we suggest a new application of these ideas in the context of the splicing process, a crucial step of messenger RNA maturation in eukaryotes. We shall show that entropy effects and the resulting depletion attraction may explain the relevance of the aspecific intron length variable in the choice of splice-site recognition modality. On top of that, some qualitative features of the genome architecture of higher eukaryotes can find evolutionary realistic motivation in the light of our model.
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Affiliation(s)
- Matteo Osella
- Dipartimento di Fisica Teorica and INFN, Università degli Studi di Torino, v. Pietro Giuria 1, 10125 Torino, Italy.
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Effective interactions in polydisperse colloidal suspensions investigated using Ornstein-Zernike integral equations. J Colloid Interface Sci 2009; 338:92-8. [PMID: 19564024 DOI: 10.1016/j.jcis.2009.05.078] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2009] [Revised: 05/06/2009] [Accepted: 05/29/2009] [Indexed: 11/22/2022]
Abstract
We present a mean of calculating the effective interactions in polydisperse colloidal suspension from liquid state integral equation theory. The method is based on Lado's expansion of correlation functions in a suitable set of orthogonal polynomials. The outlined approach is subsequently used to investigate the effects of polydispersity on the effective potentials for model systems with attractive and repulsive bare interactions. The dominant effect of polydispersity of the smaller species is to weaken the effective potentials between big colloidal particles. This can be exploited as another way of tuning the interactions in colloidal suspensions to match the desired properties.
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CORTI DAVIDS, REISS HOWARD. Depletion force between a colloid particle and a wall: simple determination by means of scaled particle theory. Mol Phys 2009. [DOI: 10.1080/00268979809483159] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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24
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KINOSHITA M. Interaction between macroparticles in a binary fluid mixture: anomalous effects due to the bulk composition. Mol Phys 2009. [DOI: 10.1080/00268979909482939] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- M. KINOSHITA
- a Advanced Energy Utilization Division , Institute of Advanced Energy, Kyoto University , Uji, Kyoto , 611-0011 , Japan
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25
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Kinoshita M, Yoshidome T. Molecular origin of the negative heat capacity of hydrophilic hydration. J Chem Phys 2009; 130:144705. [PMID: 19368463 DOI: 10.1063/1.3112610] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The hydrophobic and hydrophilic hydrations are analyzed with the emphasis on the sign of the heat capacity of hydration (HCH). The angle-dependent integral equation theory combined with a multipolar water model is employed in the analysis. The hydration entropy (HE) is decomposed into the translational and orientational parts. It is found that the orientational part governs the temperature dependence of the HE. The orientational part is further decomposed into the solute-water pair correlation component (component 1) and the water reorganization component (component 2). For hydrophilic solutes, components 1 and 2 are negative and positive, respectively. As the temperature becomes higher, component 1 increases while component 2 decreases: They make positive and negative contributions to the HCH, respectively. The strong solute-water electrostatic attractive interactions induce the distortion of water structure near the solute and the break of hydrogen bonds. As the temperature increases, the effect of the attractive interactions becomes smaller and the distortion of water structure is reduced (i.e., more hydrogen bonds are recovered with increasing temperature). The latter effect dominates, leading to negative HCH. During the heat addition the formation of hydrogen bonds, which accompanies heat generation, occurs near the solute. Consequently, the addition of the same amount of heat leads to a larger increase in the thermal energy (or equivalently, in the temperature) than in the case of pure water. The hydrophobic hydration, which is opposite to the hydrophilic hydration in many respects, is also discussed in detail.
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Affiliation(s)
- Masahiro Kinoshita
- Institute of Advanced Energy, Kyoto University, Uji, Kyoto 611-0011, Japan.
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26
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Boţan V, Pesth F, Schilling T, Oettel M. Hard-sphere fluids in annular wedges: density distributions and depletion potentials. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2009; 79:061402. [PMID: 19658504 DOI: 10.1103/physreve.79.061402] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2009] [Indexed: 05/28/2023]
Abstract
We analyze the density distribution and the adsorption of solvent hard spheres in an annular slit formed by two large solute spheres or a large solute and a wall at close distances by means of fundamental measure density-functional theory, anisotropic integral equations, and simulations. We find that the main features of the density distribution in the slit are described by an effective two-dimensional system of disks in the vicinity of a central obstacle. This has an immediate consequence for the depletion force between the solutes (or the wall and the solute) since the latter receives a strong line-tension contribution due to the adsorption of the effective disks at the circumference of the central obstacle. For large solute-solvent size ratios, the resulting depletion force has a straightforward geometrical interpretation which gives a precise "colloidal" limit for the depletion interaction. For intermediate size ratios of 5-10 and high solvent packing fractions larger than 0.4, the explicit density-functional results show a deep attractive well for the depletion potential at solute contact, possibly indicating demixing in a binary mixture at low solute and high solvent packing fraction besides the occurrence of gelation and freezing.
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Affiliation(s)
- V Boţan
- Institut für Physik, Johannes Gutenberg-Universität Mainz, WA 331, D-55099 Mainz, Germany
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27
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Yoshidome T, Harano Y, Kinoshita M. Pressure effects on structures formed by entropically driven self-assembly: illustration for denaturation of proteins. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2009; 79:011912. [PMID: 19257074 DOI: 10.1103/physreve.79.011912] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2008] [Indexed: 05/27/2023]
Abstract
We propose a general framework of pressure effects on the structures formed by the self-assembly of solute molecules immersed in solvent. The integral equation theory combined with the morphometric approach is employed for a hard-body model system. Our picture is that protein folding and ordered association of proteins are driven by the solvent entropy: At low pressures, the structures almost minimizing the excluded volume (EV) generated for solvent particles are stabilized. Such structures appear to be even more stabilized at high pressures. However, it is experimentally known that the native structure of a protein is unfolded, and ordered aggregates such as amyloid fibrils and actin filaments are dissociated by applying high pressures. This initially puzzling result can also be elucidated in terms of the solvent entropy. A clue to the basic mechanism is in the phenomenon that, when a large hard-sphere solute is immersed in small hard spheres forming the solvent, the small hard spheres are enriched near the solute and this enrichment becomes greater as the pressure increases. We argue that "attraction" is entropically provided between the solute surface and solvent particles, and the attraction becomes higher with rising pressure. Due to this effect, at high pressures, the structures possessing the largest possible solvent-accessible surface area together with sufficiently small EV become more stable in terms of the solvent entropy. To illustrate this concept, we perform an analysis of pressure denaturation of three different proteins. It is shown that only the structures that have the characteristics described above exhibit interesting behavior. They first become more destabilized relative to the native structure as the pressure increases, but beyond a threshold pressure the relative instability begins to decrease and they eventually become more stable than the native structure.
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Affiliation(s)
- Takashi Yoshidome
- Institute of Advanced Energy, Kyoto University, Uji, Kyoto 611-0011, Japan
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Harano Y, Yoshidome T, Kinoshita M. Molecular mechanism of pressure denaturation of proteins. J Chem Phys 2008; 129:145103. [DOI: 10.1063/1.2991176] [Citation(s) in RCA: 68] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Dyer KM, Perkyns JS, Stell G, Pettitt BM. A molecular site-site integral equation that yields the dielectric constant. J Chem Phys 2008; 129:104512. [PMID: 19044929 PMCID: PMC2596637 DOI: 10.1063/1.2976580] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2008] [Accepted: 08/08/2008] [Indexed: 11/14/2022] Open
Abstract
Our recent derivation [K. M. Dyer et al., J. Chem. Phys. 127, 194506 (2007)] of a diagrammatically proper, site-site, integral equation theory using molecular angular expansions is extended to polar fluids. With the addition of atomic site charges we take advantage of the formal long-ranged potential field cancellations before renormalization to generate a set of numerically stable equations. Results for calculations in a minimal (spherical) angular basis set are presented for the radial distribution function, the first dipolar (110) projection, and the dielectric constant for two model diatomic systems. All results, when compared to experiment and simulation, are a significant quantitative and qualitative improvement over previous site-site theories. More importantly, the dielectric constant is not trivial and close to simulation and experiment.
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Affiliation(s)
- Kippi M Dyer
- Chemistry Department, University of Houston, Houston, Texas 77204-5003, USA
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Yuste SB, Santos A, López de Haro M. Depletion potential in the infinite dilution limit. J Chem Phys 2008; 128:134507. [DOI: 10.1063/1.2841172] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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31
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Alawneh M, Henderson D. Molecular dynamics results for the radial distribution functions of highly asymmetric hard sphere mixtures. Mol Phys 2008. [DOI: 10.1080/00268970802116906] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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32
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Kinoshita M. Molecular origin of the hydrophobic effect: Analysis using the angle-dependent integral equation theory. J Chem Phys 2008; 128:024507. [PMID: 18205459 DOI: 10.1063/1.2823733] [Citation(s) in RCA: 87] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Masahiro Kinoshita
- Institute of Advanced Energy, Kyoto University, Uji, Kyoto 611-0011, Japan.
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Cheung DL, Anton L, Allen MP, Masters AJ. Structure of molecular liquids: closure relations for hard spheroids. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2007; 76:041201. [PMID: 17994971 DOI: 10.1103/physreve.76.041201] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2007] [Indexed: 05/25/2023]
Abstract
We present the results of Monte Carlo simulations of hard spheroids of revolution of different elongations. Both prolate and oblate shapes are examined. A systematic study of the bridge function b(1,2), and direct comparison with the indirect correlation function gamma(1,2)=h(1,2)-c(1,2) at densities spanning the isotropic fluid range, allow us to evaluate the accuracy of various proposed closure relations for integral equations.
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Affiliation(s)
- David L Cheung
- Department of Physics and Centre for Scientific Computing, University of Warwick, Coventry, CV4 7AL, United Kingdom.
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34
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Malherbe JG, Krauth W. Selective-pivot sampling of radial distribution functions in asymmetric liquid mixtures. Mol Phys 2007. [DOI: 10.1080/00268970701678907] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Abstract
Two complementary routes to a new integral equation theory for site-site molecular fluids are presented. First, a simple approximation to a subset of the atomic site bridge functions in the diagrammatically proper integral equation theory is presented. This in turn leads to a form analogous to the reactive fluid theory, in which the normalization of the intramolecular distribution function and the value of the off-diagonal elements in the density matrix of the proper integral equations are the means of propagating the bridge function approximation. Second, a derivation from a topological expansion of a model for the single-site activity followed by a topological reduction and low-order truncation is given. This leads to an approximate numerical value for the new density coefficient. The resulting equations give a substantial improvement over the standard construction as shown with a series of simple diatomic model calculations.
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Teng CL, Hinderliter B, Bryant RG. Oxygen accessibility to ribonuclease a: quantitative interpretation of nuclear spin relaxation induced by a freely diffusing paramagnet. J Phys Chem A 2007; 110:580-8. [PMID: 16405330 DOI: 10.1021/jp0526593] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The nuclear spin relaxation induced by a freely diffusing paramagnetic center provides a direct measure of intermolecular accessibility. A number of factors are involved in a quantitative interpretation of relaxation data including excluded volume effects, solvation differences, and the details of the electron spin relaxation in the paramagnetic center. In the case where the electron relaxation time is short compared with correlation times describing the electron-nuclear coupling, the nuclear spin relaxation rates may be related to the effective local concentration of the paramagnetic center at different locations about the solute of interest. The local concentrations may in turn be related to differences in the local free energies of interaction between the diffusing paramagnet and the cosolute. We demonstrate this approach for the case of ribonuclease A and deduce surface free energy differences for a large number of protein proton sites. We find that the oxygen accessibility is poorly represented by hard-sphere models such as computed solvent or steric accessibility. There is a distribution of local intermolecular interactions with a width of the order of RT that dominates the report of the intermolecular exploration of the protein by this simple solute.
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Affiliation(s)
- Ching-Ling Teng
- The Biophysics Program and Chemistry Department, University of Virginia, Charlottesville, Virginia 22904-4319, USA
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Bomont JM, Bretonnet JL. Approximative "one particle" bridge function B(1)(r) for the theory of simple fluids. J Chem Phys 2007; 126:214504. [PMID: 17567205 DOI: 10.1063/1.2737046] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
New properties for the one particle bridge function B(1)(r), which are necessary to the calculation of the excess chemical potential betamue), are derived for the hard sphere fluid. The method, which only requires the knowledge of the bridge function B(2)(r), is based on an investigation of the correlation function dependence on the Kirkwood charging parameter. In this framework, the unavoidable question of topological homotopy is addressed. As far as B(2)(r) is considered as exact, this work provides useful information on B(1)(r) in the well identified dynamical regimes of the hard sphere fluid. Signatures of the transitions between these regimes are identified on the trends of B(1)(r). This approach provides self-consistent results for betamue) that agree very well with simulation data.
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Affiliation(s)
- Jean-Marc Bomont
- Laboratoire de Physique des Milieux Denses, Université Paul Verlaine, 1, Boulevard F. D. Arago, 57078 Metz Cedex 3, France.
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Kolafa J, Labík S. Density expansion of the radial distribution and bridge functions of the hard sphere fluid. Mol Phys 2007. [DOI: 10.1080/00268970600664925] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- Jiří Kolafa
- a Department of Physical Chemistry , Prague Institute of Chemical Technology , 166 28 Praha 6, Czech Republic
| | - Stanislav Labík
- a Department of Physical Chemistry , Prague Institute of Chemical Technology , 166 28 Praha 6, Czech Republic
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Roth R, Kinoshita M. Depletion potential between large spheres immersed in a multicomponent mixture of small spheres. J Chem Phys 2006; 125:084910. [PMID: 16965060 DOI: 10.1063/1.2345200] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
We analyze the depletion potential between large spheres in a multicomponent mixture of dense small spheres (up to seven components) using the integral equation theory (IET), in which semiempirical bridge functions are incorporated, and the insertion approach within the framework of density functional theory (DFT). The diameters of the small spheres considered are in the range of d(S)-5d(S). The results from the IET and DFT are in close agreement with each other. The depletion potential in the mixture is substantially different from that in a one-component system of dense small spheres with diameter d(S). In comparison with the latter, the former possesses in general a less pronounced oscillatory structure, and the free-energy barrier for large spheres to overcome before reaching the contact is significantly reduced. This tendency can be enhanced as the number of components increases. In a several-component mixture of small spheres whose diameters are suitably chosen and in which the packing fractions of the components share the same value, the depletion potential is essentially short ranged and attractive and possesses a sufficiently large, negative value at the contact.
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Affiliation(s)
- Roland Roth
- Max-Planck-Institut für Metallforschung, Heisenbergstrasse 3, D-70569 Stuttgart, Germany
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41
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Cheung DL, Anton L, Allen MP, Masters AJ. Structure of molecular liquids: cavity and bridge functions of the hard spheroid fluid. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2006; 73:061204. [PMID: 16906815 DOI: 10.1103/physreve.73.061204] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2006] [Indexed: 05/11/2023]
Abstract
We present methodologies for calculating the direct correlation function c(1,2), the cavity function y(1,2), and the bridge function b(1,2), for molecular liquids, from Monte Carlo simulations. As an example we present results for the isotropic hard spheroid fluid with elongation e = 3. The simulation data are compared with the results from integral equation theory. In particular, we solve the Percus-Yevick and hypernetted chain equations. In addition, we calculate the first two terms in the virial expansion of the bridge function and incorporate this into the closure. At low densities, the bridge functions calculated by theory and from simulation are in good agreement, lending support to the correctness of our numerical procedures. At higher densities, the hypernetted chain results are brought into closer agreement with simulation by incorporating the approximate bridge function, but significant discrepancies remain.
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Affiliation(s)
- David L Cheung
- Department of Physics and Centre for Scientific Computing, University of Warwick, Coventry, CV4 7AL, United Kingdom.
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Kwak SK, Kofke DA. Evaluation of bridge-function diagrams via Mayer-sampling Monte Carlo simulation. J Chem Phys 2006; 122:104508. [PMID: 15836333 DOI: 10.1063/1.1860559] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We report coefficients of the h-bond expansion of the bridge function of the hard-sphere system up to order rho(4) (where rho is the density in units of the hard-sphere diameter), which in the highest-order term includes 88 cluster diagrams with bonds representing the total correlation function h(r). Calculations are performed using the recently introduced Mayer-sampling method for evaluation of cluster integrals, and an iterative scheme is applied in which the h(r) used in the cluster integrals is determined by solution of the Ornstein-Zernike equation with a closure given by the calculated clusters. Calculations are performed for reduced densities from 0.1 to 0.9 in increments of 0.1. Comparison with molecular simulation data shows that the convergence is very slow for the density expansion of the bridge function calculated this way.
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Affiliation(s)
- Sang Kyu Kwak
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, NY 14260-4200, USA
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43
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Kinoshita M. Roles of entropic excluded-volume effects in colloidal and biological systems: Analyses using the three-dimensional integral equation theory. Chem Eng Sci 2006. [DOI: 10.1016/j.ces.2004.02.023] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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44
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Bryk P. Effective interactions in colloid-semipermeable membrane systems. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2006; 22:3214-20. [PMID: 16548580 DOI: 10.1021/la053357v] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
We investigate effective interactions between a colloidal particle, immersed in a binary mixture of smaller spheres, and a semipermeable membrane. The colloid is modeled as a big hard sphere, and the membrane is represented as an infinitely thin surface, which is fully permeable to one of the smaller spheres and impermeable to the other one. Within the framework of the density functional theory, we evaluate depletion potentials and we consider two different approximate theories: the simple Asakura-Oosawa approximation and the accurate White-Bear version of the fundamental measure theory. The effective potentials are compared with the corresponding potentials for the hard, nonpermeable wall. Using statistical-mechanical sum rules, we argue that the contact value of the depletion potential between a colloid and a semipermeable membrane is smaller in magnitude than the potential between a colloid and a hard wall. A heuristic argument is provided that the colloid-semipermeable membrane effective interactions are generally weaker than these near a hard nonpermeable wall. These predictions are confirmed by explicit calculations, and the effect is more pronounced for smaller osmotic pressures. The depletion potential for a colloidal particle inside a semipermeable vesicle is stronger than the potential for the colloidal particle located outside of a vesicle. We find that the asymptotic decay of the depletion potential for the semipermeable membrane is similar to that for the nonpermeable wall and reflects the asymptotics of the total correlation function of the corresponding binary mixture of smaller spheres. Our results demonstrate that the ability of the membrane to change its shape as well as specific interactions constitute an important factor in determining the effective interactions between the semipermeable membrane and the colloidal macroparticle.
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Affiliation(s)
- Paweł Bryk
- Department for the Modeling of Physico-Chemical Processes, Maria Curie-Skłodowska University, 20-031 Lublin, Poland.
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45
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Amokrane S, Ayadim A, Malherbe JG. Structure of highly asymmetric hard-sphere mixtures: An efficient closure of the Ornstein-Zernike equations. J Chem Phys 2005; 123:174508. [PMID: 16375547 DOI: 10.1063/1.2102891] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
A simple modification of the reference hypernetted chain (RHNC) closure of the multicomponent Ornstein-Zernike equations with bridge functions taken from Rosenfeld's hard-sphere bridge functional is proposed. Its main effect is to remedy the major limitation of the RHNC closure in the case of highly asymmetric mixtures--the wide domain of packing fractions in which it has no solution. The modified closure is also much faster, while being of similar complexity. This is achieved with a limited loss of accuracy, mainly for the contact value of the big sphere correlation functions. Comparison with simulation shows that inside the RHNC no-solution domain, it provides a good description of the structure, while being clearly superior to all the other closures used so far to study highly asymmetric mixtures. The generic nature of this closure and its good accuracy combined with a reduced no-solution domain open up the possibility to study the phase diagram of complex fluids beyond the hard-sphere model.
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Affiliation(s)
- S Amokrane
- Physique des Liquides et Milieux Complexes, Faculté des Sciences et de Technologie Université Paris XII, 61 Avenue du Général de Gaulle, 94010 Créteil Cedex, France.
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Vatamanu J, Cann NM. Evaluation of site-site bridge diagrams for molecular fluids. J Chem Phys 2004; 121:6922-34. [PMID: 15473751 DOI: 10.1063/1.1789131] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The presence of bridge functions in formally exact integral equation theories is the primary obstacle preventing the extraction of exact fluid structure from these theories. The bridge functions are typically neglected but in many fluids their impact may be significant. Each bridge function can be subdivided into bridge diagrams, which are well defined but difficult to evaluate. The calculation of bridge diagrams for the Chandler-Silbey-Ladanyi (CSL) integral equation theory is the subject of this paper. In particular, we evaluate the diagrams required to yield an exact theory up to the first power in density [O(rho(1))] and provide algorithms that remain feasible for any molecule. Further, the bridge diagrams are evaluated and compared with the f-bond and h-bond formulations. Exact bridge diagrams are numerically evaluated for several chiral molecules, for two polar dimers, and for SPC/E water. The quality of the diagrams is assessed in two ways: First, the predicted interatomic distributions are compared with those obtained from Monte Carlo simulations. Second, the connectivity constraints are evaluated and the errors in satisfying these exact relationships are compared for the f-bond and h-bond formulations. For apolar fluids, a clear improvement in CSL theory is evident with the inclusion of O(rho(0)) and O(rho(1)) diagrams. In contrast, for polar fluids, the inclusion of bridge diagrams does not lead to improvement in the structural predictions.
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Affiliation(s)
- J Vatamanu
- Department of Chemistry, Queen's University Kingston, Ontario K7L3N6, Canada
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Trokhymchuk A, Henderson D, Nikolov A, Wasan DT. Interaction between a macrosphere and a flat wall mediated by a hard-sphere colloidal suspension. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2004; 20:7036-7044. [PMID: 15301485 DOI: 10.1021/la040008c] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
The interaction between the macrosphere and the flat wall immersed in a binary fluid comprising small and large (size ratio around 1:10) hard spheres has been investigated. We find that the presence of the highly size-asymmetric particles qualitatively modifies the induced excluded-volume interaction between the macrosphere and the flat wall compared to that observed in a single-component suspending fluid comprised of only large or only small species. The role in the interaction between a macrosphere and a flat wall played by species of the fine component that usually is approximated by a continuum medium (primitive description of a bidisperse fluid) is emphasized. Particularly, we show that taking into account the smaller component of a bidisperse suspending fluid modifies significantly the macrosphere-wall depletion attraction that is predicted when only large particles are taken into account. The depletion attraction force created by the presence of small fluid particles enhances the adsorption of large particles and their structuring on the wall.
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Affiliation(s)
- Andrij Trokhymchuk
- Department of Chemistry and Biochemistry, Brigham Young University, C411A, BNSN, P.O. Box 5700, Provo, Utah 84602, USA
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Henderson D, Wasan DT, Trokhymchuk A. Effective interaction between large spheres immersed into a multicomponent hard-sphere fluid. J Chem Phys 2003. [DOI: 10.1063/1.1624051] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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50
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Kinoshita M. Interaction between surfaces with solvophobicity or solvophilicity immersed in solvent: Effects due to addition of solvophobic or solvophilic solute. J Chem Phys 2003. [DOI: 10.1063/1.1566935] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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