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Galitskiy SA, Artemyev AN, Jänkälä K, Lagutin BM, Demekhin PV. Hartree-Fock calculation of the differential photoionization cross sections of small Li clusters. J Chem Phys 2015; 142:034306. [DOI: 10.1063/1.4905722] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- S. A. Galitskiy
- Institut für Physik, Universität Kassel, Heinrich-Plett-Str. 40, 34132 Kassel, Germany
| | - A. N. Artemyev
- Institut für Physik, Universität Kassel, Heinrich-Plett-Str. 40, 34132 Kassel, Germany
| | - K. Jänkälä
- Department of Physics, University of Oulu, P.O. Box 3000, 90014 Oulu, Finland
| | - B. M. Lagutin
- Research Institute of Physics, Southern Federal University, Stachki Ave. 194, 344090 Rostov-on-Don, Russia
| | - Ph. V. Demekhin
- Institut für Physik, Universität Kassel, Heinrich-Plett-Str. 40, 34132 Kassel, Germany
- Research Institute of Physics, Southern Federal University, Stachki Ave. 194, 344090 Rostov-on-Don, Russia
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DOLTSINIS NIKOSL, MARX DOMINIK. FIRST PRINCIPLES MOLECULAR DYNAMICS INVOLVING EXCITED STATES AND NONADIABATIC TRANSITIONS. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2012. [DOI: 10.1142/s0219633602000257] [Citation(s) in RCA: 126] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Extensions of traditional molecular dynamics to excited electronic states and non-Born–Oppenheimer dynamics are reviewed focusing on applicability to chemical reactions of large molecules, possibly in condensed phases. The latter imposes restrictions on both the level of accuracy of the underlying electronic structure theory and the treatment of nonadiabaticity. This review, therefore, exclusively deals with ab initio "on the fly" molecular dynamics methods. For the same reason, mainly mixed quantum-classical approaches to nonadiabatic dynamics are considered.
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Affiliation(s)
- NIKOS L. DOLTSINIS
- Lehrstuhl für Theoretische Chemie, Ruhr–Universität Bochum, 44780 Bochum, Germany
| | - DOMINIK MARX
- Lehrstuhl für Theoretische Chemie, Ruhr–Universität Bochum, 44780 Bochum, Germany
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Abstract
A tight-binding quantum Hamiltonian and an empirical embedded-atom model (EAM) potential are used to get insight into the finite-temperature behavior of small Lin clusters, n = 8, 20, and 55. Exchange Monte Carlo simulations provide an extensive sampling of configuration space, including the putative global minimum and many relevant isomers. The heat capacities obtained from the classical simulations are corrected for low-temperature quantum delocalization using the Pitzer-Gwinn approximation. Alternatively, the caloric curves are estimated from the database of local minima using the quantum harmonic superposition approximation. While the two atomistic models predict qualitatively similar features, including some premelting effects in Li20 but none in Li55, strong variations are observed in the melting temperatures, the EAM potential giving unexpectedly low values.
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Bonacić-Koutecký V, Mitrić R. Theoretical Exploration of Ultrafast Dynamics in Atomic Clusters: Analysis and Control. Chem Rev 2004; 105:11-66. [PMID: 15720151 DOI: 10.1021/cr0206925] [Citation(s) in RCA: 73] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Vlasta Bonacić-Koutecký
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, D-12489 Berlin, Germany.
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Lai SK, Lin WD, Wu KL, Li WH, Lee KC. Specific heat and Lindemann-like parameter of metallic clusters: Mono- and polyvalent metals. J Chem Phys 2004; 121:1487-98. [PMID: 15260694 DOI: 10.1063/1.1763144] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The Brownian-type molecular dynamics simulation is revisited and applied to study the thermal and geometric properties of four mono- and two polyvalent metallic clusters. For the thermal property, we report the specific heat at constant volume CV and study the solid-liquid-like transition by scrutinizing its characteristic. For the geometric property, we calculate the root mean square relative bond-length fluctuation delta as a function of increasing temperature. The thermal change in delta reflects the movement of atoms and hence is a relevant parameter in understanding the phase transition in clusters. The simulated results for the CV of alkali and aluminum clusters whose ground state structures exhibit icosahedral symmetry generally show one phase transition. In contrast, the tetravalent lead is quite often seen to exhibit two phase transitions, a premelting process followed by a progressive melting. In connection with the premelting scenario, it is found here that those (magic number) clusters identified to be of lesser stability (among other stable ones) according to the second energy difference are clusters showing a greater possibility of undergoing premelting process. This energy criterion applies to aluminum clusters nAl=28 and 38. To delve further into the thermal behavior of clusters, we have analyzed also the thermal variation of deltaT and attempted to correlate it with CV(T). It turns out that the premelting (if exist) and melting temperatures of the smaller size clusters (n less, similar 50) extracted from CV do not always agree quantitatively with that deduced from delta.
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Affiliation(s)
- S K Lai
- Complex Liquids Laboratory, Department of Physics, National Central University, Chung-li 320, Taiwan, Republic of China
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Yamataka H, Aida M. Ab Initio Direct Molecular Dynamics Simulations and QM/MM Computations in Search of Organic Reaction Mechanisms. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2002. [DOI: 10.1246/bcsj.75.2555] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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de Visser SP, Danovich D, Wu W, Shaik S. Ferromagnetic Bonding: Properties of High-Spin Lithium Clusters n+1Lin (n = 2−12) Devoid of Electron Pairs. J Phys Chem A 2002. [DOI: 10.1021/jp014665e] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sam P. de Visser
- The Department of Organic Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel, and The Department of Chemistry and the State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen, Fujian 361005, Peoples Republic of China
| | - David Danovich
- The Department of Organic Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel, and The Department of Chemistry and the State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen, Fujian 361005, Peoples Republic of China
| | - Wei Wu
- The Department of Organic Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel, and The Department of Chemistry and the State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen, Fujian 361005, Peoples Republic of China
| | - Sason Shaik
- The Department of Organic Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel, and The Department of Chemistry and the State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen, Fujian 361005, Peoples Republic of China
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de Visser SP, Alpert Y, Danovich D, Shaik S. “No-Pair Bonding” in High-Spin Lithium Clusters: n+1Lin (n = 2−6). J Phys Chem A 2000. [DOI: 10.1021/jp002723a] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Sam P. de Visser
- Department of Organic Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel
| | - Yuval Alpert
- Department of Organic Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel
| | - David Danovich
- Department of Organic Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel
| | - Sason Shaik
- Department of Organic Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel
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Ben-Nun M, Quenneville J, Martínez TJ. Ab Initio Multiple Spawning: Photochemistry from First Principles Quantum Molecular Dynamics. J Phys Chem A 2000. [DOI: 10.1021/jp994174i] [Citation(s) in RCA: 644] [Impact Index Per Article: 26.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- M. Ben-Nun
- Department of Chemistry and The Beckman Institute, University of Illinois, Urbana, Illinois 61801
| | - Jason Quenneville
- Department of Chemistry and The Beckman Institute, University of Illinois, Urbana, Illinois 61801
| | - Todd J. Martínez
- Department of Chemistry and The Beckman Institute, University of Illinois, Urbana, Illinois 61801
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Rousseau R, Marx D. The role of quantum and thermal fluctuations upon properties of lithium clusters. J Chem Phys 1999. [DOI: 10.1063/1.479765] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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12
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Thompson K, Martı́nez TJ. Ab initio/interpolated quantum dynamics on coupled electronic states with full configuration interaction wave functions. J Chem Phys 1999. [DOI: 10.1063/1.478027] [Citation(s) in RCA: 45] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
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Phases and Phase Changes of Small Systems. ACTA ACUST UNITED AC 1999. [DOI: 10.1007/978-3-642-58389-6_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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14
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Garzón IL, Kaplan IG, Santamaria R, Novaro O. Molecular dynamics study of the Ag6 cluster using an ab initio many-body model potential. J Chem Phys 1998. [DOI: 10.1063/1.476851] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Aida M, Yamataka H, Dupuis M. Ab initio molecular dynamics simulations on the hydrolysis of methyl chloride with explicit consideration of three water molecules. Chem Phys Lett 1998. [DOI: 10.1016/s0009-2614(98)00706-4] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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16
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Weht RO, Kohanoff J, Estrin DA, Chakravarty C. An ab initio path integral Monte Carlo simulation method for molecules and clusters: Application to Li4 and Li5+. J Chem Phys 1998. [DOI: 10.1063/1.476331] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Reichardt D, Bonačić-Koutecký V, Fantucci P, Jellinek J. Ab initio gradient corrected density functional molecular dynamics: investigation of structural and dynamical properties of the Li8 cluster. Chem Phys Lett 1997. [DOI: 10.1016/s0009-2614(97)01019-1] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Schmidt R, Knospe O, Saalmann U. Adiabatic and non-adiabatic cluster collisions. ACTA ACUST UNITED AC 1997. [DOI: 10.1007/bf03035964] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Kaplan IIG, Garzón IL, Santamaría R, Vaisberg BS, Novaro O. Ab initio model potentials and their application to the thermal stability of metal clusters. ACTA ACUST UNITED AC 1997. [DOI: 10.1016/s0166-1280(97)00043-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Martinez TJ, Levine RD. First‐principles molecular dynamics on multiple electronic states: A case study of NaI. J Chem Phys 1996. [DOI: 10.1063/1.472486] [Citation(s) in RCA: 62] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Bonačić-Koutecký V, Pittner J, Koutecký J. Ab initio study of structural and optical response properties of excess-electron lithium-hydride and sodium-fluoride clusters. Chem Phys 1996. [DOI: 10.1016/0301-0104(96)00151-6] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Ingólfsson O, Weik F, Illenberger E. The reactivity of slow electrons with molecules at different degrees of aggregation: gas phase, clusters and condensed phase. ACTA ACUST UNITED AC 1996. [DOI: 10.1016/s0168-1176(96)04392-3] [Citation(s) in RCA: 118] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Martins JL. Stability of NanPb (n <~ 7) clusters: A first-principles molecular-dynamics study. PHYSICAL REVIEW. B, CONDENSED MATTER 1996; 54:2937-2941. [PMID: 9986152 DOI: 10.1103/physrevb.54.2937] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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Peslherbe GH, Hase WL. Semiempirical MNDO, AM1, and PM3 direct dynamics trajectory studies of formaldehyde unimolecular dissociation. J Chem Phys 1996. [DOI: 10.1063/1.471504] [Citation(s) in RCA: 71] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Kaplan IG, Hernández-Cobos J, Ortega-Blake I, Novaro O. Many-body forces and electron correlation in small metal clusters. PHYSICAL REVIEW. A, ATOMIC, MOLECULAR, AND OPTICAL PHYSICS 1996; 53:2493-2500. [PMID: 9913162 DOI: 10.1103/physreva.53.2493] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
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Peslherbe GH, Wang H, Hase WL. Trajectory Studies of SN2 Nucleophilic Substitution. 5. Semiempirical Direct Dynamics of Cl-- - -CH3Br Unimolecular Decomposition. J Am Chem Soc 1996. [DOI: 10.1021/ja953120t] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Gilles H. Peslherbe
- Contribution from the Department of Chemistry, Wayne State University, Detroit, Michigan 48202
| | - Haobin Wang
- Contribution from the Department of Chemistry, Wayne State University, Detroit, Michigan 48202
| | - William L. Hase
- Contribution from the Department of Chemistry, Wayne State University, Detroit, Michigan 48202
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Knöll T, Müller H, Fritsche H, Opitz C. Molekulardynamische Simulationen an kleinen Metallclustern — Li
N
-Ikosaederstrukturen bei endlichen Temperaturen. ACTA ACUST UNITED AC 1996. [DOI: 10.1524/zpch.1996.194.part_1.021] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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29
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Fantucci P, Bonačić-Koutecký V, Jellinek J, Wiechert M, Harrison R, Guest M. Ab initio Hartree-Fock molecular dynamics with parallel processing: application to small neutral and charged Lin clusters. Chem Phys Lett 1996. [DOI: 10.1016/0009-2614(95)01432-2] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Bonačić‐Koutecký V, Pittner J, Fuchs C, Fantucci P, Guest MF, Koutecký J. Ab initio predictions of structural and optical response properties of Na+n clusters: Interpretation of depletion spectra at low temperature. J Chem Phys 1996. [DOI: 10.1063/1.470909] [Citation(s) in RCA: 72] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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31
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Heidenreich A, Sauer J. Ab initio molecular dynamics simulations of the Li4F4 cluster. ACTA ACUST UNITED AC 1995. [DOI: 10.1007/bf01745531] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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