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Ishizuka R, Yoshida N. Extended molecular Ornstein-Zernike integral equation for fully anisotropic solute molecules: Formulation in a rectangular coordinate system. J Chem Phys 2013; 139:084119. [DOI: 10.1063/1.4819211] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
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KOVALENKO ANDRIY, HIRATA FUMIO. TOWARDS A MOLECULAR THEORY FOR THE VAN DER WAALS–MAXWELL DESCRIPTION OF FLUID PHASE TRANSITIONS. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2012. [DOI: 10.1142/s0219633602000282] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
We briefly review developments of theories for phase transitions of molecular fluids and mixtures, from semi-phenomenological approaches providing equations of state with adjustable parameters to first-principles microscopic methods qualitatively correct for a variety of molecular models with realistic interaction potentials. We further present the generalization of the van der Waals–Maxwell description of fluid phase diagrams to account for chemical specificities of polar molecular fluids, such as hydrogen bonding. Our theory uses the reference interaction site model (RISM) integral equation approach complemented with the new closure we have proposed (KH approximation), successful over a wide range of density from gas to liquid. The RISM/KH theory is applied to the known three-site models of water, methanol, and hydrogen fluoride. It qualitatively reproduces their vapor-liquid phase diagrams and the structure in the gas as well as liquid phases, including hydrogen bonding. Furthermore, phase transitions of water and methanol sorbed in nanoporous carbon aerogel are described by means of the replica generalization of the RISM approach we have developed. The changes as compared to the bulk fluids are in agreement with simulations and experiment. The RISM/KH theory is promising for description of phase transitions in various associating fluids, in particular, electrolyte as well as non-electrolyte solutions and ionic liquids.
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Affiliation(s)
- ANDRIY KOVALENKO
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - FUMIO HIRATA
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
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Abstract
A very great deal of the experimental work on room-temperature ionic liquids was done after high-performance computing became readily available for quantum-chemical or molecular-dynamic calculations. I explore the use of modern computational methods to guide or aid laboratory work, and the importance of ‘old-fashioned’ theory, from before the age of fast computers. Debye and Hückel published the first really important theoretical work on correlations between charged particles, and the Nernst–Einstein formula is still used to understand electrical conductivities. I assess the usefulness of all these theoretical methods and ideas, and discuss the particular difficulties presented by ionic liquids.
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Sumi T, Sekino H. An interaction site model integral equation study of molecular fluids explicitly considering the molecular orientation. J Chem Phys 2006; 125:34509. [PMID: 16863364 DOI: 10.1063/1.2215603] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We implemented an interaction site model integral equation for rigid molecules based on a density-functional theory where the molecular orientation is explicitly considered. In this implementation of the integral equation, multiple integral of the degree of freedom of the molecular orientation is performed using efficient quadrature methods, so that the site-site pair correlation functions are evaluated exactly in the limit of low density. We apply this method to Cl(2), HCl, and H(2)O molecular fluids that have been investigated by several integral equation studies using various models. The site-site pair correlation functions obtained from the integral equation are in good agreement with the one from a simulation of these molecules. Rotational invariant coefficients, which characterize the microscopic structure of molecular fluids, are determined from the integral equation and the simulation in order to investigate the accuracy of the integral equation.
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Affiliation(s)
- Tomonari Sumi
- Department of Knowledge-Based Information Engineering, Toyohashi University of Technology, Tempaku-cho, Toyohashi 441-8580, Japan.
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Abstract
A previously proposed model for molecular dynamics (MD) simulation of liquid sulfur dioxide, SO(2), has been reviewed. Thermodynamic, structural, and dynamical properties were calculated for a large range of thermodynamic states. Predicted (P,V,T) of simulated system agrees with an elaborated equation of state recently proposed for liquid SO(2). Calculated heat capacity, expansion coefficient, and isothermal compressibility are also in good agreement with experimental data. Calculated equilibrium structure agrees with X-ray and neutron scattering measurements on liquid SO(2). The model also predicts the same (SO(2))(2) dimer structure as previously determined by ab initio calculations. Detailed analysis of equilibrium structure of liquid SO(2) is provided, indicating that, despite the rather large dipole moment of the SO(2) molecule, the structure is mainly determined by the Lennard-Jones interactions. Both single-particle and collective dynamics are investigated. Temperature dependency of dynamical properties is given. The MD results are compared with previous findings obtained from the analysis of inelastic neutron scattering spectra of liquid SO(2), including wave-vector dependent structural relaxation, tau(k), and viscosity, eta(k).
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Affiliation(s)
- Mauro C C Ribeiro
- Laboratório de Espectroscopia Molecular, Instituto de Química, Universidade de São Paulo, C.P. 26077, CEP 05513-970, São Paulo, SP, Brazil.
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Jaye AA, Hunt NT, Meech SR. Temperature- and solvation-dependent dynamics of liquid sulfur dioxide studied through the ultrafast optical Kerr effect. J Chem Phys 2006; 124:024506. [PMID: 16422610 DOI: 10.1063/1.2145760] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The ultrafast dynamics of liquid sulphur dioxide have been studied over a wide temperature range and in solution. The optically heterodyne-detected and spatially masked optical Kerr effect (OKE) has been used to record the anisotropic and isotropic third-order responses, respectively. Analysis of the anisotropic response reveals two components, an ultrafast nonexponential relaxation and a slower exponential relaxation. The slower component is well described by the Stokes-Einstein-Debye equation for diffusive orientational relaxation. The simple form of the temperature dependence and the agreement between collective (OKE) and single molecule (e.g., NMR) measurements of the orientational relaxation time suggests that orientational pair correlation is not significant in this liquid. The relative contributions of intermolecular interaction-induced and single-molecule orientational dynamics to the ultrafast part of the spectral density are discussed. Single-molecule librational-orientational dynamics appear to dominate the ultrafast OKE response of liquid SO2. The temperature-dependent OKE data are transformed to the frequency domain to yield the Raman spectral density for the low-frequency intermolecular modes. These are bimodal with the lowest-frequency component arising from diffusive orientational relaxation and a higher-frequency component connected with the ultrafast time-domain response. This component is characterized by a shift to higher frequency at lower temperature. This result is analyzed in terms of a harmonic librational oscillator model, which describes the data accurately. The observed spectral shifts with temperature are ascribed to increasing intermolecular interactions with increasing liquid density. Overall, the dynamics of liquid SO2 are found to be well described in terms of molecular orientational relaxation which is controlled over every relevant time range by intermolecular interactions.
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Affiliation(s)
- Andrew A Jaye
- School of Chemical Sciences and Pharmacy, University of East Anglia, Norwich NR4 7TJ, United Kingdom
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Yokogawa D, Sato H, Sakaki S. A new method to reconstruct three-dimensional spatial distribution function from radial distribution function in solvation structure. J Chem Phys 2005; 123:211102. [PMID: 16356029 DOI: 10.1063/1.2137695] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Three-dimensional spatial distribution function (SDF) of solvent is a fundamental quantity for analysis of solvation. However, its calculation has been very limited because long computational time is required. We here developed a novel and robust method to construct approximated SDFs of solvent sites from radial distribution functions. In this method, the expansion of SDFs in real solid harmonics around atoms of solute leads to a linear equation, from which SDFs are evaluated with reasonable computational time. This method is applied to the analysis of the solvation structure of liquid water, as an example. The successful results clearly show that this method is very powerful to investigate solvation structure.
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Affiliation(s)
- Daisuke Yokogawa
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Nishikyo-ku, Kyoto 615-8510, Japan
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Veglio N, Bermejo FJ, Pardo LC, Tamarit JL, Cuello GJ. Direct experimental assessment of the strength of orientational correlations in polar liquids. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2005; 72:031502. [PMID: 16241439 DOI: 10.1103/physreve.72.031502] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2004] [Revised: 01/26/2005] [Indexed: 05/05/2023]
Abstract
The strength of molecular orientational correlations in polar liquids is assessed by means of comparison of the diffuse scattering patterns of a liquid composed by molecules devoid of permanent electric dipole but having a weak quadrupole moment and those for a liquid composed by permanent molecular dipoles. The extent of orientational correlations within the liquid phases is in both cases assessed by comparison of the liquid radial distributions to those present in the rotator-phase (plastic) crystal phases of both compounds. For such disordered-crystal phases, information concerning orientational correlations is directly derived from the experimental scattering patterns by means of analysis of the diffuse scattering background present beneath the Bragg peaks. The results show that rather than long-ranged, orientational correlations in polar or polarizable liquids are confined within distances comprising the second coordination sphere.
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Affiliation(s)
- N Veglio
- CSIC-Department of Electricity and Electronics, University of the Basque Country, P.O. Box 664, 48080 Bilbao, Spain
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Kinoshita M. Density and orientational structure of water around a hydrophobic solute: effects due to the solute size. J Mol Liq 2005. [DOI: 10.1016/j.molliq.2004.10.007] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Paci I, Cann NM. The impact of the multipolar distribution on chiral discrimination in racemates. J Chem Phys 2004; 120:4816-28. [PMID: 15267342 DOI: 10.1063/1.1645780] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
This article explores the impact of the multipolar distribution on chiral discrimination in a series of racemic fluids. Discrimination is measured via the difference between the like-like (LL) and the like-unlike (LU) radial distributions in the liquid. We have found previously that the magnitude and orientation of the molecular dipole have a decisive impact on the short-ranged enantiomeric imbalance in racemates. Although quadrupolar and octupolar interactions decrease more rapidly with intermolecular separation, they can be significant at small separations, where enantiomeric imbalances occur. We have carefully selected a number of models in which we isolate the effects of the molecular quadrupole and octupole. We find that discrimination can be greatly enhanced by changes in the quadrupole moments. However, for octupole moments, changes in discrimination are small and some octupoles inhibit discrimination. We identify the quadrupole moment closest to the plane perpendicular to the direction of the molecular dipole as the moment that has the greatest favorable effect on chiral discrimination in racemates. In racemates where this moment is large, we have found differences of up to 40% between the LL and the LU radial distributions.
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Affiliation(s)
- I Paci
- Department of Chemistry, Queen's University, Kingston, Ontario K7L 3N6, Canada
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Reddy G, Lawrence CP, Skinner JL, Yethiraj A. Liquid state theories for the structure of water. J Chem Phys 2003. [DOI: 10.1063/1.1627326] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Kinoshita M. Interaction between surfaces with solvophobicity or solvophilicity immersed in solvent: Effects due to addition of solvophobic or solvophilic solute. J Chem Phys 2003. [DOI: 10.1063/1.1566935] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Martínez-Haya B, Cuetos A, Lago S. Solution of the Percus-Yevick equation for square well spherocylinders. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2003; 67:051201. [PMID: 12786138 DOI: 10.1103/physreve.67.051201] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2002] [Revised: 01/13/2003] [Indexed: 05/24/2023]
Abstract
The Percus-Yevick equation for square-well spherocylinders has been numerically solved for some selected orientations following a methodology proposed previously for different fluids of elongated molecules. The equation is solved for particles of aspect ratios ranging from L/sigma=0.3 up to L/sigma=5.0, attractive range lambda/sigma=1.5, and packing fractions within eta=0.1-0.3. The resulting pair correlation functions are checked against isothermal-isobaric Monte Carlo simulations and good agreement is found for the short-range structure, at intermolecular distances within one molecular diameter sigma to contact for each of the selected orientations. At larger distances, the integral equation tends to overestimate the pair correlations. The results confirm the prediction of reference-system average Mayer-function perturbation theory for short aspect ratios, reaching the Onsager limit for the greater aspect ratios. Some instabilities of the solution for the longest models and higher densities are tentatively discussed in terms of their possible relation to frustration phenomena found in some polymer and complex systems.
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Affiliation(s)
- B Martínez-Haya
- Departamento de Ciencias Ambientales, Facultad de Ciencias Experimentales, Universidad Pablo de Olavide, Ctra. de Utrera Km 1, 41013 Seville, Spain.
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Urbič T, Vlachy V, Kalyuzhnyi YV, Dill KA. Orientation-dependent integral equation theory for a two-dimensional model of water. J Chem Phys 2003. [DOI: 10.1063/1.1556754] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Fischer R, Richardi J, Fries PH, Krienke H. The solvation of ions in acetonitrile and acetone. II. Monte Carlo simulations using polarizable solvent models. J Chem Phys 2002. [DOI: 10.1063/1.1512281] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Furuhama A, Ten-no S. The use of distributed partial wave basis for accurate atom–molecule statistical distributions. J Chem Phys 2002. [DOI: 10.1063/1.1496461] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Kinoshita M, Imai T, Kovalenko A, Hirata F. Improvement of the reference interaction site model theory for calculating the partial molar volume of amino acids and polypeptides. Chem Phys Lett 2001. [DOI: 10.1016/s0009-2614(01)01129-0] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Cann NM, Das B. Structure and discrimination in chiral fluids: A molecular dynamics and integral equation study. J Chem Phys 2000. [DOI: 10.1063/1.482052] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Lombardero M, Martı́n C, Jorge S, Lado F, Lomba E. An integral equation study of a simple point charge model of water. J Chem Phys 1999. [DOI: 10.1063/1.478156] [Citation(s) in RCA: 61] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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