1
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Parra RD. Cooperative strengthening of the halogen bond in cyclic clusters of iodine monofluoride, (IF)n (n = 3–8): From a closed-shell interaction, F-I…F, to a symmetric partly covalent interaction, F…I…F. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.139825] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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2
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Liu N, Xie X, Li Q, Scheiner S. Enhancement of the Tetrel Bond by the Effects of Substituents, Cooperativity, and Electric Field: Transition from Noncovalent to Covalent Bond. Chemphyschem 2021; 22:2305-2312. [PMID: 34436816 DOI: 10.1002/cphc.202100612] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Indexed: 12/14/2022]
Abstract
The T⋅⋅⋅N tetrel bond (TB) formed between TX3 OH (T=C, Si, Ge; X=H, F) and the Lewis base N≡CM (M=H, Li, Na) is studied by ab initio calculations at the MP2/aug-cc-pVTZ level. Complexes involving TH3 OH contain a conventional TB with interaction energy less than 10 kcal/mol. This bond is substantially strengthened, approaching 35 kcal/mol and covalent character, when fluorosubstituted TF3 OH is combined with NCLi or NCNa. Along with this enhanced binding comes a near equalization of the TB T⋅⋅⋅N and the internal T-O bond lengths, and the associated structure acquires a trigonal bipyramidal shape, despite a high internal deformation energy. This structural transformation becomes more complete, and the TB is further strengthened upon adding an electron acceptor BeCl2 to the Lewis acid and a base to the NCM unit. This same TB strengthening can be accomplished also by imposition of an external electric field.
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Affiliation(s)
- Na Liu
- Laboratory of Theoretical and Computational Chemistry and, School of Chemistry and Chemical Engineering, Yantai University, Yantai, 264005, China
| | - Xiaoying Xie
- Laboratory of Theoretical and Computational Chemistry and, School of Chemistry and Chemical Engineering, Yantai University, Yantai, 264005, China
| | - Qingzhong Li
- Laboratory of Theoretical and Computational Chemistry and, School of Chemistry and Chemical Engineering, Yantai University, Yantai, 264005, China
| | - Steve Scheiner
- Department of Chemistry and Biochemistry, Utah State University, Logan, UT 84322-0300, USA
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3
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Yang Q, Zhou B, Li Q, Scheiner S. Weak σ‐Hole Triel Bond between C
5
H
5
Tr (Tr=B, Al, Ga) and Haloethyne: Substituent and Cooperativity Effects. Chemphyschem 2021; 22:481-487. [DOI: 10.1002/cphc.202000955] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2020] [Revised: 12/13/2020] [Indexed: 12/19/2022]
Affiliation(s)
- Qingqing Yang
- Laboratory of Theoretical and Computational Chemistry and School of Chemistry and Chemical Engineering Yantai University 264005 Yantai China
| | - Bohua Zhou
- Laboratory of Theoretical and Computational Chemistry and School of Chemistry and Chemical Engineering Yantai University 264005 Yantai China
| | - Qingzhong Li
- Laboratory of Theoretical and Computational Chemistry and School of Chemistry and Chemical Engineering Yantai University 264005 Yantai China
| | - Steve Scheiner
- Department of Chemistry and Biochemistry Utah State University 84322-0300 Logan UT USA
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4
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Sutradhar D, Bhattarai S, Parveen S, Chandra AK. Comparison between Chlorine-Shared and π-Halogen Bonds Involving Substituted Phosphabenzene and ClF Molecules. ACS OMEGA 2020; 5:24095-24105. [PMID: 32984731 PMCID: PMC7513335 DOI: 10.1021/acsomega.0c03567] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Accepted: 08/27/2020] [Indexed: 06/11/2023]
Abstract
Ab initio MP2/aug-cc-pVTZ calculations have been carried out in order to study the nature of P···Cl halogen bonding interaction between a phosphorus atom in an aromatic ring in para-substituted phosphabenzene (PPBZ) and ClF molecule. The interaction of PPBZ with ClF results in two different types of complexes: (i) complex formation through the chlorine-shared halogen bond (T1-X-PPBZ·ClF) and (ii) complex formation via halogen-π interaction (T2-X-PPBZ·ClF). T1-X-PPBZ·ClF complexes are found to be more stable than the T2-X-PPBZ·ClF complexes. This work also presents a general criterion to distinguish a chlorine-shared halogen bond from a traditional halogen bond and sheds light on the formation of the chlorine-shared halogen bond. The binding energy of T1-X-PPBZ·ClF complexes correlates well with the negative electrostatic potential of the P atom and PA value of the substituted PPBZ. The properties of both T1-X-PPBZ·ClF and T2-X-PPBZ·ClF complexes are analyzed using atom-in-molecule, natural bond orbital, and symmetry-adapted perturbation theory calculations. The variation of the Cl-F bond distances and the redshifts of the ν(ClF) vibration resulting from the interaction with PPBZs are discussed.
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Affiliation(s)
- Dipankar Sutradhar
- Solid
State and Structural Chemistry Unit, Indian
Institute of Science, Bangalore, Karnataka 560012, India
| | - Sumitra Bhattarai
- Department
of Chemistry, North-Eastern Hill University, Shillong 793022, India
| | - Salma Parveen
- Department
of Chemistry, North-Eastern Hill University, Shillong 793022, India
| | - Asit K. Chandra
- Department
of Chemistry, North-Eastern Hill University, Shillong 793022, India
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5
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Wang R, Cheng Z, Li Q, McDowell SA. Regular/abnormal variation in the strength and nature of the halogen bond between H
2
Te and the dihalogens: Prominent effect of methyl substituents. Appl Organomet Chem 2020. [DOI: 10.1002/aoc.5468] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Ruijing Wang
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical EngineeringYantai University Yantai 264005 China
| | - Ziyi Cheng
- Institute of Functional Materials and Molecular Imaging, Key Laboratory of Emergency and Trauma, Ministry of Education, College of Emergency and TraumaHainan Medical University Haikou 571199 China
| | - Qingzhong Li
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical EngineeringYantai University Yantai 264005 China
| | - Sean A.C. McDowell
- Department of Biological and Chemical SciencesThe University of the West Indies Cave Hill Campus Barbados
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6
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McDowell SAC, Dong W, Wang Y, Li Q. Noncovalent Interactions in Complexes Involving the Cyclic C
2
H
2
X (X=O, S, Se) Molecules and the Lewis Acids YF (Y=F, Cl, Br, H). ChemistrySelect 2019. [DOI: 10.1002/slct.201901463] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Sean A. C. McDowell
- Department of Biological and Chemical SciencesThe University of the West Indies, Cave Hill Campus Barbados
| | - Wenbo Dong
- The Laboratory of Theoretical and Computational ChemistrySchool of Chemistry and Chemical EngineeringYantai University Yantai 264005, P. R. China
| | - Yanqing Wang
- The Laboratory of Theoretical and Computational ChemistrySchool of Chemistry and Chemical EngineeringYantai University Yantai 264005, P. R. China
| | - Qingzhong Li
- The Laboratory of Theoretical and Computational ChemistrySchool of Chemistry and Chemical EngineeringYantai University Yantai 264005, P. R. China
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7
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Orlova AP, Jasien PG. Halogen bonding in self-assembling systems: A comparison of intra- and interchain binding energies. COMPUT THEOR CHEM 2018. [DOI: 10.1016/j.comptc.2018.07.004] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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8
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Del Bene JE, Alkorta I, Elguero J. Hydrogen and Halogen Bonding in Cyclic FH(4-n):FCln Complexes, for n = 0–4. J Phys Chem A 2018; 122:2587-2597. [DOI: 10.1021/acs.jpca.8b00236] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Janet E. Del Bene
- Department of Chemistry, Youngstown State University, Youngstown, Ohio 44555, United States
| | - Ibon Alkorta
- Instituto de Química Médica (IQM-CSIC), Juan de la Cierva, 3, E-28006 Madrid, Spain
| | - José Elguero
- Instituto de Química Médica (IQM-CSIC), Juan de la Cierva, 3, E-28006 Madrid, Spain
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9
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Del Bene JE, Alkorta I, Elguero J. Halogen Bonding Involving CO and CS with Carbon as the Electron Donor. Molecules 2017; 22:E1955. [PMID: 29137153 PMCID: PMC6150174 DOI: 10.3390/molecules22111955] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2017] [Revised: 11/07/2017] [Accepted: 11/09/2017] [Indexed: 11/16/2022] Open
Abstract
MP2/aug'-cc-pVTZ calculations have been carried out to investigate the halogen-bonded complexes formed when CO and CS act as electron-pair donors through C to ClF, ClNC, ClCl, ClOH, ClCN, ClCCH, and ClNH₂. CO forms only complexes stabilized by traditional halogen bonds, and all ClY molecules form traditional halogen-bonded complexes with SC, except ClF which forms only an ion-pair complex. Ion-pair complexes are also found on the SC:ClNC and SC:ClCl surfaces. SC:ClY complexes stabilized by traditional halogen bonds have greater binding energies than the corresponding OC:ClY complexes. The largest binding energies are found for the ion-pair SC-Cl⁺:-Y complexes. The transition structures which connect the complex and the ion pair on SC:ClNC and SC:ClCl potential surfaces provide the barriers for inter-converting these structures. Charge-transfer from the lone pair on C to the σ-hole on Cl is the primary charge-transfer interaction stabilizing OC:ClY and SC:ClY complexes with traditional halogen bonds. A secondary charge-transfer occurs from the lone pairs on Cl to the in-plane and out-of-plane π antibonding orbitals of ClY. This secondary interaction assumes increased importance in the SC:ClNH₂ complex, and is a factor leading to its unusual structure. C-O and C-S stretching frequencies and 13C chemical shieldings increase upon complex formation with ClY molecules. These two spectroscopic properties clearly differentiate between SC:ClY complexes and SC-Cl⁺:-Y ion pairs. Spin-spin coupling constants 1xJ(C-Cl) for OC:ClY complexes increase with decreasing distance. As a function of the C-Cl distance, 1xJ(C-Cl) and ¹J(C-Cl) provide a fingerprint of the evolution of the halogen bond from a traditional halogen bond in the complexes, to a chlorine-shared halogen bond in the transition structures, to a covalent bond in the ion pairs.
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Affiliation(s)
- Janet E Del Bene
- Department of Chemistry, Youngstown State University, Youngstown, OH 44555, USA.
| | - Ibon Alkorta
- Instituto de Química Médica (IQM-CSIC), Juan de la Cierva, 3, E-28006 Madrid, Spain.
| | - José Elguero
- Instituto de Química Médica (IQM-CSIC), Juan de la Cierva, 3, E-28006 Madrid, Spain.
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10
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The σ and π Holes. The Halogen and Tetrel Bondings: Their Nature, Importance and Chemical, Biological and Medicinal Implications. ChemistrySelect 2017. [DOI: 10.1002/slct.201701676] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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11
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Adasme-Carreño F, Alzate-Morales J, Ireta J. Modeling cooperative effects in halogen-bonded infinite linear chains. Phys Chem Chem Phys 2017; 19:18529-18538. [PMID: 28682384 DOI: 10.1039/c7cp03078a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Non-additivity in noncovalent interactions is an important aspect of complex systems that can lead to stronger (cooperative) interactions when three or more molecular units influence each other. The halogen bond (XB) is a highly-directional noncovalent interaction that has been found to be cooperative. Here the strength and nature of cooperativity arising in X-bonded infinite linear chains of cyanogen halides and 4-halopyridines are investigated by means of density functional theory calculations. It is found that cyanogen halide chains are highly cooperative (up to 77%), whereas pyridines are only slightly cooperative (below 21%). It is demonstrated that XB and its non-additivity can be modeled as the sum of a local term, which depends on first nearest-neighbors only, and long-range effective dipole-dipole attractions. It is shown that the local term in cyanogen halides primarily accounts for repulsive short-range screened Coulomb interactions, whereas in 4-halopyridines such a term also includes attractive contributions, which are particularly sizeable in some elongated XB conformations. This outcome reveals differences in the nature of the XBs formed in these molecular systems. Nevertheless, it is shown that both systems behave as effective point dipoles regarding cooperative effects, at any point of the XB dissociation path. As such, these results are useful contributions for the understanding and modeling of non-additive effects of noncovalent interactions.
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Affiliation(s)
- Francisco Adasme-Carreño
- Centro de Bioinformática y Simulación Molecular (CBSM), Facultad de Ingeniería, Universidad de Talca, 1 Poniente 1141, Casilla 721, Talca, Chile.
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12
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Esrafili MD, Mousavian P. Unusual cooperativity effects between halogen bond and donor-acceptor interactions: The role of orbital interaction. Chem Phys Lett 2017. [DOI: 10.1016/j.cplett.2017.04.052] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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13
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Nunes R, Costa PJ. Ion-Pair Halogen Bonds in 2-Halo-Functionalized Imidazolium Chloride Receptors: Substituent and Solvent Effects. Chem Asian J 2017; 12:586-594. [PMID: 28052536 DOI: 10.1002/asia.201601690] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2016] [Revised: 01/02/2017] [Indexed: 01/14/2023]
Abstract
The interaction of 2-halo-functionalized imidazolium derivatives (n-X+ ; X=Cl, Br, I) with a chloride anion through ion-pair halogen bonds (n-X⋅Cl) was studied by means of DFT and ab initio calculations. A method benchmark was performed on 2-bromo-1H-imidazol-3-ium in association with chloride (1-Br⋅Cl); MP2 yielded the best results when compared with CCSD(T) calculations. The interaction energies (ΔE) in the gas phase are high and, although the electrostatic interaction is strong owing to the ion-pair nature of the system, large X⋅⋅⋅Cl- Wiberg bond orders and contributions from charge transfer (nCl- →σ*C-X) are obtained. These values drop considerably in chloroform and water; this shows that solvent plays a role in modulating the interaction and that gas-phase calculations are particularly unrealistic for experimental applications. The introduction of electron-withdrawing groups in the 4,5-positions of the imidazolium (e.g., -NO2 , -F) increases the halogen-bond strength in both the gas phase and solvent, including water. The effect of the substituents on the 1,3-positions (N-H groups) also depends on the solvent. The variation of ΔE can be predicted through a two-parameter linear regression that optimizes the weights of charge-transfer and electrostatic interactions, which are different in vacuum and in solvent (chloroform and water). These results could be used in the rational design of efficient chloride receptors based on halogen bonds that work in solution, in particular, in an aqueous environment.
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Affiliation(s)
- Rafael Nunes
- Centro de Química e Bioquímica, DQB, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
| | - Paulo J Costa
- Centro de Química e Bioquímica, DQB, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
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14
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Xu H, Cheng J, Li Q, Li W. Some measures for making a traditional halogen bond be chlorine-shared or ion-pair one in FCl•NH3 complex. Mol Phys 2016. [DOI: 10.1080/00268976.2016.1255798] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Huili Xu
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai, People's Republic of China
| | - Jianbo Cheng
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai, People's Republic of China
| | - Qingzhong Li
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai, People's Republic of China
| | - Wenzuo Li
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai, People's Republic of China
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15
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Affiliation(s)
- A. Subha Mahadevi
- Centre for Molecular Modelling, CSIR-Indian Institute of Chemical Technology, Tarnaka, Hyderabad, India 500607
| | - G. Narahari Sastry
- Centre for Molecular Modelling, CSIR-Indian Institute of Chemical Technology, Tarnaka, Hyderabad, India 500607
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16
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Esrafili MD, Mohammadian-Sabet F, Baneshi MM. Cooperative and substitution effects in enhancing the strength of fluorine bonds by anion−π interactions. CAN J CHEM 2015. [DOI: 10.1139/cjc-2015-0154] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
In this work, the cooperative effects between anion−π and fluorine bond interactions are studied by ab initio calculations at the MP2/6-311++G** level. Cooperative effects are observed in complexes in which anion−π and fluorine bond interactions coexist. For each complex, the shortening of the binding distance in the fluorine bond is more prominent than that in the anion−π bond. Favorable cooperativity energies are found with values that range between –0.51 and –0.76 kcal/mol. The atoms in molecules and molecular electrostatic potential analyses are carried out for these complexes to understand the nature of anion−π and fluorine bond interactions and the origin of the cooperativity.
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Affiliation(s)
- Mehdi D. Esrafili
- Laboratory of Theoretical Chemistry, Department of Chemistry, University of Maragheh, Maragheh, Iran
| | - Fariba Mohammadian-Sabet
- Laboratory of Theoretical Chemistry, Department of Chemistry, University of Maragheh, Maragheh, Iran
| | - Mohammad Mehdi Baneshi
- Social Determinant of Health Research Center, Yasuj University of Medical Sciences, Yasuj, Iran
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17
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Gao M, Cheng J, Yang X, Li W, Xiao B, Li Q. Influence of substituents on the nature of metal⋯π interaction and its cooperativity with halogen bond. J Chem Phys 2015; 143:054308. [DOI: 10.1063/1.4927669] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
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18
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Esrafili MD, Mohammadian-Sabet F. Bifurcated chalcogen bonds: A theoretical study on the structure, strength and bonding properties. Chem Phys Lett 2015. [DOI: 10.1016/j.cplett.2015.06.034] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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19
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Tang Q, Li Q. Abnormal synergistic effects between Lewis acid–base interaction and halogen bond in F3B···NCX···NCM. Mol Phys 2015. [DOI: 10.1080/00268976.2015.1065352] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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20
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Guo X, An X, Li Q. Se···N Chalcogen Bond and Se···X Halogen Bond Involving F2C═Se: Influence of Hybridization, Substitution, and Cooperativity. J Phys Chem A 2015; 119:3518-27. [DOI: 10.1021/acs.jpca.5b00783] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xin Guo
- The
Laboratory of Theoretical and Computational Chemistry, School of Chemistry
and Chemical Engineering, Yantai University, Yantai 264005, People’s Republic of China
| | - Xiulin An
- College
of Life Science, Yantai University, Yantai 264005, People’s Republic of China
| | - Qingzhong Li
- The
Laboratory of Theoretical and Computational Chemistry, School of Chemistry
and Chemical Engineering, Yantai University, Yantai 264005, People’s Republic of China
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21
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Understanding the bifurcated halogen bonding N⋯Hal⋯N in bidentate diazaheterocyclic compounds. COMPUT THEOR CHEM 2015. [DOI: 10.1016/j.comptc.2014.09.024] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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22
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Alkorta I, Elguero J, Mó O, Yáñez M, Del Bene JE. Using beryllium bonds to change halogen bonds from traditional to chlorine-shared to ion-pair bonds. Phys Chem Chem Phys 2015; 17:2259-67. [DOI: 10.1039/c4cp04574b] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Dramatic synergistic cooperative effects between Be⋯F beryllium bonds and Cl⋯N halogen bonds in XYBe:FCl:N-base ternary complexes lead to changes in the halogen-bond type from traditional to chlorine-shared to ion-pair bonds.
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Affiliation(s)
- Ibon Alkorta
- Instituto de Química Médica (IQM-CSIC)
- 28006-Madrid
- Spain
| | - José Elguero
- Instituto de Química Médica (IQM-CSIC)
- 28006-Madrid
- Spain
| | - Otilia Mó
- Departamento de Química
- 28049 Madrid
- Spain
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23
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Bartashevich EV, Tsirelson VG. Interplay between non-covalent interactions in complexes and crystals with halogen bonds. RUSSIAN CHEMICAL REVIEWS 2014. [DOI: 10.1070/rcr4440] [Citation(s) in RCA: 129] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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24
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Donoso-Tauda O, Jaque P, Elguero J, Alkorta I. Traditional and ion-pair halogen-bonded complexes between chlorine and bromine derivatives and a nitrogen-heterocyclic carbene. J Phys Chem A 2014; 118:9552-60. [PMID: 25188812 DOI: 10.1021/jp506663x] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
A theoretical study of the halogen-bonded complexes (A-X···C) formed between halogenated derivatives (A-X; A = F, Cl, Br, CN, CCH, CF3, CH3, H; and X = Cl, Br) and a nitrogen heterocyclic carbene, 1,3-dimethylimidazole-2-ylidene (MeIC) has been performed using MP2/aug'-cc-pVDZ level of theory. Two types of A-X:MeIC complexes, called here type-I and -II, were found and characterized. The first group is described by long C-X distances and small binding energies (8-54 kJ·mol(-1)). In general, these complexes show the traditional behavior of systems containing halogen-bonding interactions. The second type is characterized by short C-X distances and large binding energies (148-200 kJ·mol(-1)), and on the basis of the topological analysis of the electron density, they correspond to ion-pair halogen-bonded complexes. These complexes can be seen as the interaction between two charged fragments: A(-) and (+)[X-CIMe] with a high electrostatic contribution in the binding energy. The charge transfer between lone pair A(LP) to the σ* orbital of C-X bond is also identified as a significant stabilizing interaction in type-II complexes.
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Affiliation(s)
- Oscar Donoso-Tauda
- Departamento de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello , Av. Republica 275, Santiago, Chile
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25
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Lv H, Zhuo HY, Li QZ, Yang X, Li WZ, Cheng JB. Halogen bonds with N-heterocyclic carbenes as halogen acceptors: a partially covalent character. Mol Phys 2014. [DOI: 10.1080/00268976.2014.926031] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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26
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Liu H, Man R, Wang Z, Yi P, Liu J. Theoretical investigation on the interplay of hydrogen bond and halogen bond in HX⋯(BrCl)n (X = F, Cl, Br and n = 1, 2) complexes. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2014. [DOI: 10.1142/s0219633614500011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Quantum chemical calculations at the MP2 level with the aug-cc-pVTZ basis set were used to investigate the HX ⋯( BrCl )n ( X = F , Cl , Br and n = 1, 2) complexes. They are connected via hydrogen bond or halogen bond in dimers and together in trimers. Molecular geometries, interaction energies, cooperative energies and atomic charge of dyads and triads have been studied at the Mp2/aug-cc-pVTZ computational level. All studied trimers show cooperativity with the simultaneous presence of a hydrogen and one or two halogen bond. The molecular electrostatic potential has been employed to explore the formation mechanisms of these molecular complexes. The AIM analysis has been performed at the Mp2/aug-cc-pVTZ level to examine the topological characteristics, confirming the coexistence of hydrogen bonds and one or two halogen bond for each complex.
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Affiliation(s)
- Hexiu Liu
- School of Chemistry and Chemical Engineering, Central South University, Changsha 410083, P. R. China
- Key Laboratory of Theoretical Chemistry and Molecular Simulation of Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, P. R. China
| | - Ruilin Man
- School of Chemistry and Chemical Engineering, Central South University, Changsha 410083, P. R. China
| | - Zhaoxu Wang
- Key Laboratory of Theoretical Chemistry and Molecular Simulation of Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, P. R. China
| | - Pinggui Yi
- Key Laboratory of Theoretical Chemistry and Molecular Simulation of Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, P. R. China
| | - Jingjing Liu
- School of Chemistry and Chemical Engineering, Central South University, Changsha 410083, P. R. China
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LIU HEXIU, MAN RUILIN, WANG ZHAOXU, YI PINGGUI, ZENG JIANXIAN. COOPERATIVITY BETWEEN HYDROGEN BOND AND HALOGEN BOND IN HBr⋯BrX⋯HBr (X = F, Cl, Br). JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2013. [DOI: 10.1142/s0219633613500284] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
An ab initio study has been carried out to investigate the structures, binding energies and atomic charge of the binary complexes HBr⋯BrX and ternary complexes HBr⋯BrX⋯HBr (X = F, Cl, Br) at the MP2/aug-cc-pvdz theoretical level. Four types of interactions are observed among these systems: hydrogen bond, halogen bond, unusual hydrogen bond and unusual halogen bond. Two types of stable structures existed in the trimers: acyclic and monocyclic. The stabilities of the complexes may be decided by three factors: the strength of the halogen bond, the nature of halogen or hydrogen bond of intermolecular interaction and the type of the trimer's structure. The absolute value of the cooperativity contribution in these triads is in range of 0.77 ∼ 21.59%, which shows that the cooperative energy is of importance in them. The nature of the intermolecular interactions has been also investigated through the electrostatic potential and the theory of atoms in molecules (AIM). The values of ∇2ρ at BCPs are positive in all complexes, indicating that the interactions are closed-shell. The ratio |Vc|∕Gc of all complexes ranges from 0.782 to 0.935 (satisfy the condition |Vc|∕Gc < 1) along with Hc > 0, revealing that these complexes are predominantly electrostatic in character.
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Affiliation(s)
- HEXIU LIU
- School of Chemistry and Chemical Engineering, Central South University, Changsha 410083, P. R. China
- Key Laboratory of Theoretical Chemistry and Molecular, Simulation of Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, P. R. China
| | - RUILIN MAN
- School of Chemistry and Chemical Engineering, Central South University, Changsha 410083, P. R. China
| | - ZHAOXU WANG
- Key Laboratory of Theoretical Chemistry and Molecular, Simulation of Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, P. R. China
| | - PINGGUI YI
- Key Laboratory of Theoretical Chemistry and Molecular, Simulation of Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, P. R. China
| | - JIANXIAN ZENG
- Key Laboratory of Theoretical Chemistry and Molecular, Simulation of Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, P. R. China
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Tian W, Huang X, Li Q, Li W, Cheng J, Gong B. Effect of superalkali substituents on the strengths and properties of hydrogen and halogen bonds. J Mol Model 2012. [DOI: 10.1007/s00894-012-1685-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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