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Bakhsh S, Aslam S, Khalid M, Sohail M, Zafar S, Wadood SA, Morsy K, Iqbal MA. Ca n neutral clusters: a two-step G 0 W 0 and DFT benchmark. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2024; 15:1010-1016. [PMID: 39136042 PMCID: PMC11318633 DOI: 10.3762/bjnano.15.82] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/22/2024] [Accepted: 07/24/2024] [Indexed: 08/15/2024]
Abstract
Electronic and structural properties of calcium clusters with a varying size range of 2-20 atoms are studied using a two-step scheme within the GW and density functional theory (DFT) with generalized gradient approximation (GGA). The GGA overestimates the binding energies, optimized geometries, electron affinities, and ionization potentials reported in the benchmark. The ground-state structure geometry and binding energy were obtained from the DFT for the ground-state structure of each cluster. The binding energy of the neutral clusters of the calcium series follows an increasing trend, except for a few stable even and odd clusters. The electronic properties of the calcium cluster were studied with an all-electron FHI-aims code. In the G 0 W 0 calculation, the magic cluster Ca10 has relatively high ionization potential and low electron affinity. The obtained ionization potentials from the G 0 W 0 @PBE calculation showed that the larger cluster has less variation, whereas the electron affinities of the series have an increasing trend. The ionization potentials from the G 0 W 0 benchmark for the calcium cluster series have not yet been described in the literature.
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Affiliation(s)
- Sunila Bakhsh
- Department of Physics, Balochistan University of Information Technology Engineering and Management Sciences, Quetta 87300, Pakistan
| | - Sameen Aslam
- Department of Physics, Balochistan University of Information Technology Engineering and Management Sciences, Quetta 87300, Pakistan
| | - Muhammad Khalid
- Department of Physics, Balochistan University of Information Technology Engineering and Management Sciences, Quetta 87300, Pakistan
| | - Muhammad Sohail
- Department of Physics, University of Balochistan, Quetta 87300, Pakistan
| | - Sundas Zafar
- Department of Physics, Sardar Bahadur Khan Women University, Quetta 87300, Pakistan
| | - Sumayya Abdul Wadood
- Department of Physics, Balochistan University of Information Technology Engineering and Management Sciences, Quetta 87300, Pakistan
| | - Kareem Morsy
- Biology Department, College of Science, King Khalid University, Abha 61421, Saudi Arabia
| | - Muhammad Aamir Iqbal
- School of Materials Science and Engineering, Zhejiang University, Hangzhou 310027, China
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Liang X, Huang X, Su Y, Zhao J. Structures and electronic properties of neutral and anionic Ca (n= 2–22) clusters. Chem Phys Lett 2015. [DOI: 10.1016/j.cplett.2015.05.064] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Lysgaard S, Mýrdal JSG, Hansen HA, Vegge T. A DFT-based genetic algorithm search for AuCu nanoalloy electrocatalysts for CO₂ reduction. Phys Chem Chem Phys 2015; 17:28270-6. [PMID: 25924775 DOI: 10.1039/c5cp00298b] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Using a DFT-based genetic algorithm (GA) approach, we have determined the most stable structure and stoichiometry of a 309-atom icosahedral AuCu nanoalloy, for potential use as an electrocatalyst for CO2 reduction. The identified core-shell nano-particle consists of a copper core interspersed with gold atoms having only copper neighbors and a gold surface with a few copper atoms in the terraces. We also present an adsorbate-dependent correction scheme, which enables an accurate determination of adsorption energies using a computationally fast, localized LCAO-basis set. These show that it is possible to use the LCAO mode to obtain a realistic estimate of the molecular chemisorption energy for systems where the computation in normal grid mode is not computationally feasible. These corrections are employed when calculating adsorption energies on the Cu, Au and most stable mixed particles. This shows that the mixed Cu135@Au174 core-shell nanoalloy has a similar adsorption energy, for the most favorable site, as a pure gold nano-particle. Cu, however, has the effect of stabilizing the icosahedral structure because Au particles are easily distorted when adding adsorbates.
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Affiliation(s)
- Steen Lysgaard
- Department of Energy Conversion and Storage, Technical University of Denmark, Frederiksborgvej 399, DK-4000 Roskilde, Denmark.
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Li H, Xiao HJ, Zhu TS, Xuan HC, Li M. The effect of the size and shape on the bond number of quantum dots and its relationship with thermodynamic properties. Phys Chem Chem Phys 2015; 17:17973-9. [DOI: 10.1039/c5cp02086g] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
The size- and shape-related Ba/Bt functions.
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Affiliation(s)
- H. Li
- College of Materials Science and Engineering
- Taiyuan University of Technology
- Taiyuan 030024
- China
| | - H. J. Xiao
- College of Materials Science and Engineering
- Taiyuan University of Technology
- Taiyuan 030024
- China
| | - T. S. Zhu
- School of Physics and Electric Information
- Huaibei Normal University
- Huaibei
- China
| | - H. C. Xuan
- College of Materials Science and Engineering
- Taiyuan University of Technology
- Taiyuan 030024
- China
| | - M. Li
- School of Physics and Electric Information
- Huaibei Normal University
- Huaibei
- China
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Nhat PV, Nguyen MT. Structures, spectra, and energies of niobium clusters from Nb13 to Nb20. J Phys Chem A 2012; 116:7405-18. [PMID: 22686504 DOI: 10.1021/jp302279j] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A comprehensive theoretical investigation on structures and properties of niobium clusters in the range from 13 to 20 atoms, in three different charged states, is performed by using the BPW91 and M06 functionals and the cc-pVDZ-PP basis set. These species are predicted to prefer low spin ground state, i.e., singlet (for even electron) and doublet (for odd electron) systems. In terms of growth mechanism, a compact structure with one Nb encapsulated by a cage formed from five and six triangles is found to be favored over an icosahedral evolution. Unlike many 3d metals, whose volumes are much smaller, 13 and 19 Nb atoms clusters do not exist as icosahedra and double-icosahedra. A distinct case is Nb(15) as it bears a slightly distorted bcc structure. For some systems, several lower lying isomers are computed to be so close in energy that DFT computations cannot clearly establish their ground electronic states. The existence of structural isomers with comparable energy content is established for Nb(n) species with n = 13, 18, 19, and 20 in both neutral and charged states. The vibrational (IR) spectra are also calculated. While the spectra of smaller systems are strongly dependent on addition or removal of an electron from the neutral, the spectra of the larger size clusters are mostly independent of the charged state. The neutrals and their corresponding ions usually have a quite similar IR pattern. Electron affinities (EA), ionization energies (IE), average binding energies, dissociation energies, and frontier orbital energy gaps are evaluated. The computed EAs and IEs are generally in fair agreement with experiment. The Nb(15) system is observed to be stable and it can form a highly symmetric structure in all charged states with both open and closed electron shells.
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Affiliation(s)
- Pham Vu Nhat
- Department of Chemistry, University of Leuven, B-3001 Leuven, Belgium
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Bulusu S, Fournier R. Density functional theory guided Monte Carlo simulations: Application to melting of Na13. J Chem Phys 2012; 136:064112. [DOI: 10.1063/1.3684628] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Shao X, Yang X, Cai W. A dynamic lattice searching method with interior operation for unbiased optimization of large Lennard-Jones clusters. J Comput Chem 2008; 29:1772-9. [DOI: 10.1002/jcc.20938] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Lee JS. Accurate ab Initio Binding Energies of Alkaline Earth Metal Clusters. J Phys Chem A 2005; 109:11927-32. [PMID: 16366644 DOI: 10.1021/jp040705d] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The effects of basis set superposition error (BSSE) and core-correlation on the electronic binding energies of alkaline earth metal clusters Y(n) (Y = Be, Mg, Ca; n = 2-4) at the Moller-Plesset second-order perturbation theory (MP2) and the single and double coupled cluster method with perturbative triples correction (CCSD(T)) levels are examined using the correlation consistent basis sets cc-pVXZ and cc-pCVXZ (X = D, T, Q, 5). It is found that, while BSSE has a negligible effect for valence-electron-only-correlated calculations for most basis sets, its magnitude becomes more pronounced for all-electron-correlated calculations, including core electrons. By utilizing the negligible effect of BSSE on the binding energies for valence-electron-only-correlated calculations, in combination with the negligible core-correlation effect at the CCSD(T) level, accurate binding energies of these clusters up to pentamers (octamers in the case of the Be clusters) are estimated via the basis set extrapolation of ab initio CCSD(T) correlation energies of the monomer and cluster with only the cc-pVDZ and cc-pVTZ sets, using the basis set and correlation-dependent extrapolation formula recently devised. A comparison between the CCSD(T) and density functional theory (DFT) binding energies is made to identify the most appropriate DFT method for the study of these clusters.
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Affiliation(s)
- Jae Shin Lee
- Department of Chemistry, College of Natural Sciences, Ajou University, Suwon, Korea 443-749
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Cheng L, Cai W, Shao X. A connectivity table for cluster similarity checking in the evolutionary optimization method. Chem Phys Lett 2004. [DOI: 10.1016/j.cplett.2004.03.125] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Xiang Y, Jiang H, Cai W, Shao X. An Efficient Method Based on Lattice Construction and the Genetic Algorithm for Optimization of Large Lennard-Jones Clusters. J Phys Chem A 2004; 108:3586-3592. [PMID: 28413878 DOI: 10.1021/jp037780t] [Citation(s) in RCA: 74] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yuhong Xiang
- Department of Chemistry, University of Science and Technology of China, Hefei, Anhui, 230026, P. R. China
| | - Haiyan Jiang
- Department of Chemistry, University of Science and Technology of China, Hefei, Anhui, 230026, P. R. China
| | - Wensheng Cai
- Department of Chemistry, University of Science and Technology of China, Hefei, Anhui, 230026, P. R. China
| | - Xueguang Shao
- Department of Chemistry, University of Science and Technology of China, Hefei, Anhui, 230026, P. R. China
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Shao X, Cheng L, Cai W. A dynamic lattice searching method for fast optimization of Lennard-Jones clusters. J Comput Chem 2004; 25:1693-8. [PMID: 15362126 DOI: 10.1002/jcc.20096] [Citation(s) in RCA: 95] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
A highly efficient unbiased global optimization method called dynamic lattice searching (DLS) was proposed. The method starts with a randomly generated local minimum, and finds better solution by a circulation of construction and searching of the dynamic lattice (DL) until the better solution approaches the best solution. The DL is constructed adaptively based on the starting local minimum by searching the possible location sites for an added atom, and the DL searching is implemented by iteratively moving the atom located at the occupied lattice site with the highest energy to the vacant lattice site with the lowest energy. Because the DL can greatly reduce the searching space and the number of the time-consuming local minimization procedures, the proposed DLS method runs at a very high efficiency, especially for the clusters of larger size. The performance of the DLS is investigated in the optimization of Lennard-Jones (LJ) clusters up to 309 atoms, and the structure of the LJ(500) is also predicted. Furthermore, the idea of dynamic lattice can be easily adopted in the optimization of other molecular or atomic clusters. It may be a promising approach to be universally used for structural optimizations in the chemistry field.
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Affiliation(s)
- Xueguang Shao
- Department of Chemistry, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China.
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Lloyd LD, Johnston RL, Salhi S, Wilson NT. Theoretical investigation of isomer stability in platinum–palladium nanoalloy clusters. ACTA ACUST UNITED AC 2004. [DOI: 10.1039/b313811a] [Citation(s) in RCA: 83] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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17
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Jiang, Cai, Shao. New Lowest Energy Sequence of Marks' Decahedral Lennard-Jones Clusters Containing up to 10 000 Atoms. J Phys Chem A 2003. [DOI: 10.1021/jp0342327] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jiang
- Department of Chemistry, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China
| | - Cai
- Department of Chemistry, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China
| | - Shao
- Department of Chemistry, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China
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Shetty S, Pal S, Kanhere DG. A study of electronic and bonding properties of Sn doped Li[sub n] clusters and aluminum based binary clusters through electron localization function. J Chem Phys 2003. [DOI: 10.1063/1.1562944] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Lai SK, Hsu PJ, Wu KL, Liu WK, Iwamatsu M. Structures of metallic clusters: Mono- and polyvalent metals. J Chem Phys 2002. [DOI: 10.1063/1.1521128] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Darby S, Mortimer-Jones TV, Johnston RL, Roberts C. Theoretical study of Cu–Au nanoalloy clusters using a genetic algorithm. J Chem Phys 2002. [DOI: 10.1063/1.1429658] [Citation(s) in RCA: 317] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Massen C, Mortimer-Jones TV, Johnston RL. Geometries and segregation properties of platinum–palladium nanoalloy clusters. ACTA ACUST UNITED AC 2002. [DOI: 10.1039/b207847c] [Citation(s) in RCA: 116] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Wilson NT, Johnston RL. A theoretical study of atom ordering in copper–gold nanoalloy clusters. ACTA ACUST UNITED AC 2002. [DOI: 10.1039/b204069g] [Citation(s) in RCA: 80] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Wang GM, Blaisten-Barojas E, Roitberg AE, Martin TP. Strontium clusters: Many-body potential, energetics, and structural transitions. J Chem Phys 2001. [DOI: 10.1063/1.1384454] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Wang Y, Flad HJ, Dolg M. Ab Initio Study of Structure and Bonding of Strontium Clusters. J Phys Chem A 2000. [DOI: 10.1021/jp000092e] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yixuan Wang
- Max-Planck-Institut für Physik Komplexer Systeme, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
| | - Heinz-Jürgen Flad
- Max-Planck-Institut für Physik Komplexer Systeme, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
| | - Michael Dolg
- Max-Planck-Institut für Physik Komplexer Systeme, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
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Turner GW, Johnston RL, Wilson NT. Investigation of geometric shell aluminum clusters using the Gupta many-body potential. J Chem Phys 2000. [DOI: 10.1063/1.481086] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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30
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Analysis of chemical bond in metal clusters: I. Alkali metal and alkaline earth metals. ADVANCES IN QUANTUM CHEMISTRY 2000. [DOI: 10.1016/s0065-3276(00)37017-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register]
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Wang Y, Schautz F, Flad HJ, Dolg M. On the Importance of 5d Orbitals for Covalent Bonding in Ytterbium Clusters. J Phys Chem A 1999. [DOI: 10.1021/jp9905169] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yixuan Wang
- Max-Planck-Institut für Physik komplexer Systeme, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
| | - Friedemann Schautz
- Max-Planck-Institut für Physik komplexer Systeme, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
| | - Heinz-Jürgen Flad
- Max-Planck-Institut für Physik komplexer Systeme, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
| | - Michael Dolg
- Max-Planck-Institut für Physik komplexer Systeme, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
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Bauer SH, Zhang YX, Wilcox CF. Kinetic mechanism for condensation from supersaturated vapors that incorporate high levels of dimers. J Chem Phys 1999. [DOI: 10.1063/1.478725] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Jellinek J, Krissinel EB. Alloy Clusters: Structural Classes, Mixing, and Phase Changes. THEORY OF ATOMIC AND MOLECULAR CLUSTERS 1999. [DOI: 10.1007/978-3-642-58389-6_12] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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