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Chen HH, Yang SM, Yang KE, Chiu CY, Chang CJ, Wang YS, Lee TT, Huang YF, Chen YY, Petibois C, Chang SH, Cai X, Low CM, Tan FCK, Teo A, Tok ES, Lim JH, Je JH, Kohmura Y, Ishikawa T, Margaritondo G, Hwu Y. High-resolution fast-tomography brain-imaging beamline at the Taiwan Photon Source. JOURNAL OF SYNCHROTRON RADIATION 2021; 28:1662-1668. [PMID: 34475313 DOI: 10.1107/s1600577521007633] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Accepted: 07/26/2021] [Indexed: 06/13/2023]
Abstract
The new Brain Imaging Beamline (BIB) of the Taiwan Photon Source (TPS) has been commissioned and opened to users. The BIB and in particular its endstation are designed to take advantage of bright unmonochromatized synchrotron X-rays and target fast 3D imaging, ∼1 ms exposure time plus very high ∼0.3 µm spatial resolution. A critical step in achieving the planned performances was the solution to the X-ray induced damaging problems of the detection system. High-energy photons were identified as their principal cause and were solved by combining tailored filters/attenuators and a high-energy cut-off mirror. This enabled the tomography acquisition throughput to reach >1 mm3 min-1, a critical performance for large-animal brain mapping and a vital mission of the beamline.
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Affiliation(s)
- Hsiang Hsin Chen
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Shun Min Yang
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Kai En Yang
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Ching Yu Chiu
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Chia Ju Chang
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Ya Sian Wang
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Tsung Tse Lee
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Yu Fen Huang
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Yi Yun Chen
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Cyril Petibois
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
| | - Shih Hung Chang
- National Synchrotron Radiation Research Center, Hsinchu 30076, Taiwan
| | - Xiaoqing Cai
- Shanghai Institute of Applied Physics, Chinese Academy of Science, Shanghai, People's Republic of China
| | - Chian Ming Low
- Department of Pharmacology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore
| | - Francis Chee Kuan Tan
- Department of Anaesthesia, National University Hospital, National University Health System, Singapore
| | - Alvin Teo
- School of Chemical and Life Sciences, Nanyang Polytechnic, Singapore
| | - Eng Soon Tok
- eMaGIC-Lab, Department of Physics, National University of Singapore, Singapore
| | - Jae Hong Lim
- Pohang Accelerator Laboratory, Pohang University of Science and Technology, Pohang, Gyeongbuk 37673, South Korea
| | - Jun Ho Je
- Department of Materials Science and Engineering, Pohang University of Science and Technology, Pohang, Gyeongbuk 37673, South Korea
| | | | | | - Giorgio Margaritondo
- Faculté des Sciences de Base, Ecole Polytechnique Fédérale de Lausanne, Lausanne 1015, Switzerland
| | - Yeukuang Hwu
- Institute of Physics, Academia Sinica, 128 Academia Road Sec. 2, Taipei 11529, Taiwan
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Kameshima T, Takeuchi A, Uesugi K, Kudo T, Kohmura Y, Tamasaku K, Muramatsu K, Yanagitani T, Yabashi M, Hatsui T. Development of an X-ray imaging detector to resolve 200 nm line-and-space patterns by using transparent ceramics layers bonded by solid-state diffusion. OPTICS LETTERS 2019; 44:1403-1406. [PMID: 30874661 DOI: 10.1364/ol.44.001403] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Accepted: 02/11/2019] [Indexed: 06/09/2023]
Abstract
A high-resolution lens-coupled X-ray imaging detector equipped with a thin-layer transparent ceramics scintillator has been developed. The scintillator consists of a 5 μm thick Ce-doped Lu3Al5O12 layer (LuAG:Ce) bonded onto the support substrate of the non-doped LuAG ceramics by using a solid-state diffusion technique. Secondary electron microscopy of the bonded interface indicated that the crystal grains were densely packed without any pores in the optical wavelength scale, indicating a quasi-uniform refractive index across the interface. This guarantees high transparency and minimum reflection, which are essential properties for X-ray imaging detectors. The LuAG:Ce scintillator was incorporated into an X-ray imaging detector coupled with an objective lens with a numerical aperture of 0.85 and an optical magnification of 100. The scintillation light was imaged onto a complementary metal-oxide-semiconductor image sensor. The effective pixel size on the scintillator plane was 65 nm. X-ray transmission images of 200 nm line-and-space patterns were successfully resolved. The high spatial resolution was demonstrated by X-ray transmission images of large integrated circuits with the wiring patterns clearly visualized.
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Lin F, Liu Y, Yu X, Cheng L, Singer A, Shpyrko OG, Xin HL, Tamura N, Tian C, Weng TC, Yang XQ, Meng YS, Nordlund D, Yang W, Doeff MM. Synchrotron X-ray Analytical Techniques for Studying Materials Electrochemistry in Rechargeable Batteries. Chem Rev 2017; 117:13123-13186. [DOI: 10.1021/acs.chemrev.7b00007] [Citation(s) in RCA: 314] [Impact Index Per Article: 44.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Feng Lin
- Department
of Chemistry, Virginia Tech, Blacksburg, Virginia 24061, United States
| | - Yijin Liu
- Stanford
Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California 94035, United States
| | - Xiqian Yu
- Chemistry
Department, Brookhaven National Laboratory, Upton, New York 11973, United States
- Beijing
National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
| | - Lei Cheng
- Energy
Storage and Distributed Resources Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Andrej Singer
- Department
of Physics, University of California San Diego, La Jolla, California 92093, United States
| | - Oleg G. Shpyrko
- Department
of Physics, University of California San Diego, La Jolla, California 92093, United States
| | - Huolin L. Xin
- Center for
Functional Nanomaterials, Brookhaven National Laboratory, Upton, New York 11973, United States
| | - Nobumichi Tamura
- Advanced
Light Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Chixia Tian
- Energy
Storage and Distributed Resources Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Tsu-Chien Weng
- Center for High Pressure Science & Technology Advanced Research, Shanghai 201203, China
| | - Xiao-Qing Yang
- Chemistry
Department, Brookhaven National Laboratory, Upton, New York 11973, United States
| | - Ying Shirley Meng
- Department
of NanoEngineering, University of California San Diego, La Jolla, California 92093, United States
| | - Dennis Nordlund
- Stanford
Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California 94035, United States
| | - Wanli Yang
- Advanced
Light Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Marca M. Doeff
- Energy
Storage and Distributed Resources Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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Vogelgesang M, Farago T, Morgeneyer TF, Helfen L, Dos Santos Rolo T, Myagotin A, Baumbach T. Real-time image-content-based beamline control for smart 4D X-ray imaging. JOURNAL OF SYNCHROTRON RADIATION 2016; 23:1254-1263. [PMID: 27577784 DOI: 10.1107/s1600577516010195] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2016] [Accepted: 06/21/2016] [Indexed: 06/06/2023]
Abstract
Real-time processing of X-ray image data acquired at synchrotron radiation facilities allows for smart high-speed experiments. This includes workflows covering parameterized and image-based feedback-driven control up to the final storage of raw and processed data. Nevertheless, there is presently no system that supports an efficient construction of such experiment workflows in a scalable way. Thus, here an architecture based on a high-level control system that manages low-level data acquisition, data processing and device changes is described. This system is suitable for routine as well as prototypical experiments, and provides specialized building blocks to conduct four-dimensional in situ, in vivo and operando tomography and laminography.
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Affiliation(s)
- Matthias Vogelgesang
- Institute for Data Processing and Electronics, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Tomas Farago
- Institute for Photon Science and Synchrotron Radiation, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Thilo F Morgeneyer
- MINES ParisTech, PSL Research University, MAT - Centre des Materiaux, CNRS UMR 7633, BP 87, 91003 Evry, France
| | - Lukas Helfen
- Institute for Photon Science and Synchrotron Radiation, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Tomy Dos Santos Rolo
- Institute for Accelerator Physics and Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Anton Myagotin
- St Petersburg State University of Civil Aviation, St Petersburg, Russia
| | - Tilo Baumbach
- Institute for Photon Science and Synchrotron Radiation, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
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Chang S, Kwon N, Kim J, Kohmura Y, Ishikawa T, Rhee CK, Je JH, Tsuda A. Synchrotron X-ray imaging of pulmonary alveoli in respiration in live intact mice. Sci Rep 2015; 5:8760. [PMID: 25737245 PMCID: PMC4348649 DOI: 10.1038/srep08760] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2014] [Accepted: 02/03/2015] [Indexed: 12/29/2022] Open
Abstract
Despite nearly a half century of studies, it has not been fully understood how pulmonary alveoli, the elementary gas exchange units in mammalian lungs, inflate and deflate during respiration. Understanding alveolar dynamics is crucial for treating patients with pulmonary diseases. In-vivo, real-time visualization of the alveoli during respiration has been hampered by active lung movement. Previous studies have been therefore limited to alveoli at lung apices or subpleural alveoli under open thorax conditions. Here we report direct and real-time visualization of alveoli of live intact mice during respiration using tracking X-ray microscopy. Our studies, for the first time, determine the alveolar size of normal mice in respiration without positive end expiratory pressure as 58 ± 14 (mean ± s.d.) μm on average, accurately measured in the lung bases as well as the apices. Individual alveoli of normal lungs clearly show heterogeneous inflation from zero to ~25% (6.7 ± 4.7% (mean ± s.d.)) in size. The degree of inflation is higher in the lung bases (8.7 ± 4.3% (mean ± s.d.)) than in the apices (5.7 ± 3.2% (mean ± s.d.)). The fraction of the total tidal volume allocated for alveolar inflation is 34 ± 3.8% (mean ± s.e.m). This study contributes to the better understanding of alveolar dynamics and helps to develop potential treatment options for pulmonary diseases.
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Affiliation(s)
- Soeun Chang
- 1] X-ray Imaging Center, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang, 790-784, Korea [2] Department of Materials Science and Engineering, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang, 790-784, Korea
| | - Namseop Kwon
- 1] X-ray Imaging Center, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang, 790-784, Korea [2] School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang, 790-784, Korea
| | - Jinkyung Kim
- X-ray Imaging Center, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang, 790-784, Korea
| | - Yoshiki Kohmura
- RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo-cho, Sayo, Hyogo, 679-5198, Japan
| | - Tetsuya Ishikawa
- RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo-cho, Sayo, Hyogo, 679-5198, Japan
| | - Chin Kook Rhee
- Division of Pulmonary and Critical Care Medicine, Department of Internal Medicine, Seoul St. Mary's Hospital, Catholic University of Korea, 505 Banpo-dong, Seocho-Gu, Seoul, 137-701, Korea
| | - Jung Ho Je
- 1] X-ray Imaging Center, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang, 790-784, Korea [2] Department of Materials Science and Engineering, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang, 790-784, Korea [3] RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo-cho, Sayo, Hyogo, 679-5198, Japan
| | - Akira Tsuda
- Harvard School of Public Health, Boston, Massachusetts, USA
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Jung JW, Jeon HM, Pyo J, Lim JH, Weon BM, Kohmura Y, Ishikawa T, Je JH. Four-dimensional visualization of rising microbubbles. Sci Rep 2014; 4:5083. [PMID: 24866552 PMCID: PMC4035580 DOI: 10.1038/srep05083] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2014] [Accepted: 05/07/2014] [Indexed: 11/09/2022] Open
Abstract
Four-dimensional imaging, which indicates imaging in three spatial dimensions as a function of time, provides useful evidence to investigate the interactions of rising bubbles. However, this has been largely unexplored for microbubbles, mostly due to problems associated with strong light scattering and shallow depth of field in optical imaging. Here, tracking x-ray microtomography is used to visualize rising microbubbles in four dimensions. Bubbles are tracked by moving the cell to account for their rise velocity. The sizes, shapes, time-dependent positions, and velocities of individual rising microbubbles are clearly identified, despite substantial overlaps between bubbles in the field of view. Our tracking x-ray microtomography affords opportunities for understanding bubble-bubble (or particle) interactions at microscales - important in various fields such as microfluidics, biomechanics, and floatation.
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Affiliation(s)
- Ji Won Jung
- X-ray Imaging Center, Department of Materials Science and Engineering, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang 790-784, Korea
| | - Hyung Min Jeon
- X-ray Imaging Center, Department of Materials Science and Engineering, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang 790-784, Korea
| | - Jaeyeon Pyo
- X-ray Imaging Center, Department of Materials Science and Engineering, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang 790-784, Korea
| | - Jae-Hong Lim
- Pohang Accelerator Laboratory, San 31, Hyoja-dong, Pohang 790-784, Korea
| | - Byung Mook Weon
- School of Advanced Materials Science and Engineering, SKKU Advanced Institute of Nanotechnology (SAINT), Sungkyunkwan University, Suwon 440-746, Korea
| | - Yoshiki Kohmura
- RIKEN/SPring-8, 1-1-1 Kouto, Mikazuki-cho, Sayo-gun, Hyogo 679-5148, Japan
| | - Tetsuya Ishikawa
- RIKEN/SPring-8, 1-1-1 Kouto, Mikazuki-cho, Sayo-gun, Hyogo 679-5148, Japan
| | - Jung Ho Je
- 1] X-ray Imaging Center, Department of Materials Science and Engineering, Pohang University of Science and Technology, San 31, Hyoja-dong, Pohang 790-784, Korea [2] RIKEN/SPring-8, 1-1-1 Kouto, Mikazuki-cho, Sayo-gun, Hyogo 679-5148, Japan
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Affiliation(s)
| | | | - Kyu Chang Park
- Author to whom correspondence should be addressed; E-Mail: ; Tel.: +82-2-961-9447; Fax: +82-2-968-6924
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