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Tosoni S, Pacchioni G. Magnetic nature and hyperfine interactions of transition metal atoms adsorbed on ultrathin insulating films: a challenge for DFT. Phys Chem Chem Phys 2022; 24:15891-15903. [PMID: 35762384 DOI: 10.1039/d2cp01224c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The magnetic ground state and the hyperfine coupling parameters of some first-row transition metal (TM) atoms (Ti, Cr, Mn, Fe, Co, and Ni) adsorbed on ultrathin insulating oxide films are studied by means of DFT calculations. The results obtained using GGA, screened hybrid, and GGA+U functionals are compared for TMs adsorbed on free-standing MgO(100). Then, the case of adsorption on MgO mono- and bilayers supported on Ag(100) is studied using GGA+U. Along with the problematic aspects inherent to the calculation of hyperfine coupling constants, a critical dependence on the magnetic state and electron configuration of the TM is reported, which implies a real challenge for the state-of-the-art DFT methods. In the cases where all functionals considered provide a coherent magnetic and electron configuration, however, the calculated hyperfine parameters do not depend significantly on the choice of the functional. In this respect, the role of the metal support in the hyperfine coupling constants is highly system-dependent and becomes crucial in all cases where the support modifies the oxidation state of the adatom, induces a change in the bonding site or simply induces a rearrangement of the orbital energy diagram. This has important implications for the modelling of single TM atoms deposited on insulating ultrathin films supported on metals for application in quantum technologies or as memory devices.
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Affiliation(s)
- Sergio Tosoni
- Dipartimento di Scienza dei Materiali, Università di Milano-Bicocca, Via Roberto Cozzi 55, 20125 Milan, Italy.
| | - Gianfranco Pacchioni
- Dipartimento di Scienza dei Materiali, Università di Milano-Bicocca, Via Roberto Cozzi 55, 20125 Milan, Italy.
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2
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“Influence of point defects on the hydrogen storage in nickel decorated GeC and SnC nanotubes’’. COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2022.113691] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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3
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Taha HO, Tarek MA. Axial deformation effects on hydrogen storage of Ni decorated (8,0) zigzag single-walled boron nitride nanotubes: a DFT study. Mol Phys 2021. [DOI: 10.1080/00268976.2021.1937738] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- H. O. Taha
- Department of Physics, Faculty of Education, Ain Shams University, Cairo, Egypt
| | - M. A. Tarek
- Department of Physics, Faculty of Education, Ain Shams University, Cairo, Egypt
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4
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Klimeš J, Tew DP. Efficient and accurate description of adsorption in zeolites. J Chem Phys 2019; 151:234108. [PMID: 31864262 DOI: 10.1063/1.5123425] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Abstract
Accurate theoretical methods are needed to correctly describe adsorption on solid surfaces or in porous materials. The random phase approximation (RPA) with singles corrections scheme and the second order Møller-Plesset perturbation theory (MP2) are two schemes, which offer high accuracy at affordable computational cost. However, there is little knowledge about their applicability and reliability for different adsorbates and surfaces. Here, we calculate adsorption energies of seven different molecules in zeolite chabazite to show that RPA with singles corrections is superior to MP2, not only in terms of accuracy but also in terms of computer time. Therefore, RPA with singles is a suitable scheme for obtaining highly accurate adsorption energies in porous materials and similar systems.
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Affiliation(s)
- Jiří Klimeš
- Department of Chemical Physics and Optics, Faculty of Mathematics and Physics, Charles University, Ke Karlovu 3, CZ-12116 Prague 2, Czech Republic
| | - David P Tew
- Max-Planck-Institut für Festkörperforschung, Heisenbergstraße 1, 70569 Stuttgart, Germany
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5
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Hussein HA, Gao M, Hou Y, Horswell SL, Johnston RL. Physico-Chemical Insights into Gas-Phase and Oxide-Supported Sub-Nanometre AuCu Clusters. Z PHYS CHEM 2019. [DOI: 10.1515/zpch-2018-1356] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Catalysis by AuCu nanoclusters is a promising scientific field. However, our fundamental understanding of the underlying mechanisms of mixing in AuCu clusters at the sub-nanometre scale and their physico-chemical properties in both the gas-phase and on oxide supports is limited. We have identified the global minima of gas-phase and MgO(100)-supported AuCu clusters with 3–10 atoms using the Mexican Enhanced Genetic Algorithm coupled with density functional theory. Au and Cu adatoms and supported dimers have been also simulated at the same level of theory. The most stable composition, as calculated from mixing and binding energies, is obtained when the Cu proportion is close to 50%. The structures of the most stable free AuCu clusters exhibit Cu-core/Au-shell segregation. On the MgO surface however, there is a preference for Cu atoms to lie at the cluster-substrate interface. Due to the interplay between the number of interfacial Cu atoms and surface-induced cluster rearrangement, on the MgO surface 3D structures become more stable than 2D structures. The O-site of MgO surface is found to be the most favourable adsorption site for both metals. All dimers favour vertical (V) configurations on the surface and their adsorption energies are in the order: AuCu < CuCu < AuAu < AuCu (where the underlined atom is bound to the O-site). For both adatoms and AuCu dimers, adsorption via Cu is more favourable than Au-adsorbed configurations, but, this disagrees with the ordering for the pure dimers due to a combination of electron transfer and the metal-on-top effect. Binding energy (and second difference) and HOMO-LUMO gap calculations show that even-atom (even-electron) clusters are more stable than the neighbouring odd-atom (odd- electron) clusters, which is expected for closed- and open-shell systems. Supporting AuCu clusters on the MgO(100) surface decreases the charge transfer between Au and Cu atoms calculated in free clusters. The results of this study may serve as a foundation for designing better AuCu catalysts.
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Affiliation(s)
- Heider A. Hussein
- School of Chemistry, University of Birmingham , Birmingham B15 2TT , UK
- Department of Chemistry , College of Science, University of Kufa , Najaf , Iraq
| | - Mansi Gao
- School of Chemistry, University of Birmingham , Birmingham B15 2TT , UK
| | - Yiyun Hou
- School of Chemistry, University of Birmingham , Birmingham B15 2TT , UK
| | - Sarah L. Horswell
- School of Chemistry, University of Birmingham , Birmingham B15 2TT , UK
| | - Roy L. Johnston
- School of Chemistry, University of Birmingham , Birmingham B15 2TT , UK
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6
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El Mahdy AM, Taha HO, Kamel MA, El Shemy F. Theoretical study of hydrogen storage reactions on nickel-decorated heterofullerene C 58 B XN Y ( X + Y = 2). Mol Phys 2018. [DOI: 10.1080/00268976.2018.1483536] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Affiliation(s)
- A. M. El Mahdy
- Department of Physics, Faculty of Education, Ain Shams University, Cairo, Egypt
| | - H. O. Taha
- Department of Physics, Faculty of Education, Ain Shams University, Cairo, Egypt
| | - M. A. Kamel
- Department of Physics, Faculty of Education, Ain Shams University, Cairo, Egypt
| | - F. El Shemy
- Department of Physics, Faculty of Education, Ain Shams University, Cairo, Egypt
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7
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Aal SA. Adsorption of NO on Pd and Pd2 supported at the regular and defective CdO (0 0 1) surfaces: Density functional theory study. JOURNAL OF TAIBAH UNIVERSITY FOR SCIENCE 2018. [DOI: 10.1016/j.jtusci.2013.09.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Safa A. Aal
- Department of Chemistry, Faculty of Science and Arts, Qassim University, PO Box 6666, Qassim, Buraidah, Saudi Arabia
- Department of Chemistry, Faculty of Science, Benha University, PO Box 13518, Benha, Egypt
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8
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Mahdy AME, Taha HO, Kamel MA, EL Shemy F. Density functional theory study of hydrogen storage on Ni-doped C59X (X = B, N) heterofullerene. Mol Phys 2016. [DOI: 10.1080/00268976.2016.1139208] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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9
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Shalabi A, El Mahdy A, Soliman K, Taha H. Theoretical characterisation of irreversible and reversible hydrogen storage reactions on Ni-doped C60fullerene. Mol Phys 2014. [DOI: 10.1080/00268976.2014.928754] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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11
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Density Functional Theory Beyond the Generalized Gradient Approximation for Surface Chemistry. Top Curr Chem (Cham) 2014. [DOI: 10.1007/128_2014_555] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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12
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Sousa C, Tosoni S, Illas F. Theoretical Approaches to Excited-State-Related Phenomena in Oxide Surfaces. Chem Rev 2012. [DOI: 10.1021/cr300228z] [Citation(s) in RCA: 71] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Carmen Sousa
- Departament de Química
Física and Institut de Química Teòrica i Computacional
(IQTCUB), Universitat de Barcelona, C/Martí
i Franquès 1, 08028 Barcelona, Spain
| | - Sergio Tosoni
- Departament de Química
Física and Institut de Química Teòrica i Computacional
(IQTCUB), Universitat de Barcelona, C/Martí
i Franquès 1, 08028 Barcelona, Spain
- Departamento de Química, Universidad de Las Palmas de Gran Canaria, Campus Universitario
de Tafira, 35017 Las Palmas de Gran Canaria, Spain
| | - Francesc Illas
- Departament de Química
Física and Institut de Química Teòrica i Computacional
(IQTCUB), Universitat de Barcelona, C/Martí
i Franquès 1, 08028 Barcelona, Spain
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13
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Adsorption and spin state properties of Cr, Ni, Mo, and Pt deposited on Li+ and Na+ monovalent cation impurities of MgO (001) surface: DFT calculations. J Mol Model 2011; 17:3299-308. [DOI: 10.1007/s00894-011-1017-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2010] [Accepted: 02/09/2011] [Indexed: 10/18/2022]
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14
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Guo J, Watanabe S, Janik MJ, Ma X, Song C. Density functional theory study on adsorption of thiophene on TiO2 anatase (001) surfaces. Catal Today 2010. [DOI: 10.1016/j.cattod.2009.05.002] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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15
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Adsorption of the first row of transition metals on the perfect and defective MgO(100) surface. Chem Phys Lett 2008. [DOI: 10.1016/j.cplett.2008.08.053] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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16
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Pacchioni G. Modeling doped and defective oxides in catalysis with density functional theory methods: room for improvements. J Chem Phys 2008; 128:182505. [PMID: 18532790 DOI: 10.1063/1.2819245] [Citation(s) in RCA: 109] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Due to the well-known problem of the self-interaction, standard density functional theory (DFT) methods tend to produce delocalized holes and electrons in defective oxide materials even when there is ample experimental evidence of a strong localization. For late transition metal compounds or rare earth oxides, this results in the incorrect description of the electronic structure of the system (e.g., magnetic insulators are predicted to be metallic). Practical ways to correct this deficiency are based on the use of hybrid functionals or of the DFT+U approach. In this way, most of the limitations related to the self-interaction are removed, and the electronic structure is properly described. What is less clear is to what extent hybrid functionals, DFT+U approaches, or standard DFT functionals can properly describe the strength of the chemical bonds at the surface of an oxide. This is a crucial question if one is interested in the catalytic properties of oxide surfaces. Oxidation reactions often involve oxygen detachment from the surface and incorporation into an organic substrate. Oxides are doped with heteroatoms to create defects and facilitate oxygen removal from the surface, with formation of oxygen vacancies. Do standard DFT calculations provide a good binding energy of the missing oxygen despite the failure in giving the right electronic structure? Can hybrid functionals or the DFT+U approach provide a simple yet reliable way to get accurate reaction enthalpies and energy barriers? In this essay, we discuss these problems by analyzing some case histories and the relatively scarce data existing in the literature. The conclusion is that while modern electronic structure methods accurately reproduce and predict a wide range of electronic, optical, and magnetic properties of oxides, the description of the strength of chemical bonds still needs considerable improvements.
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Affiliation(s)
- Gianfranco Pacchioni
- Dipartimento di Scienza dei Materiali, Università di Milano-Bicocca, Via R. Cozzi 53, Milan, Italy.
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Barcaro G, Fortunelli A. A study of bimetallic Cu–Ag, Au–Ag and Pd–Ag clusters adsorbed on a double-vacancy-defected MgO(100) terrace. Faraday Discuss 2008; 138:37-47; discussion 119-35, 433-4. [DOI: 10.1039/b705105k] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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18
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Barcaro G, Aprà E, Fortunelli A. Structure of Ag Clusters Grown on Fs-Defect Sites of an MgO(1 0 0) Surface. Chemistry 2007; 13:6408-18. [PMID: 17497620 DOI: 10.1002/chem.200601796] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
The structure of AgN clusters (N=1-4, 6, 8, 10), both in the gas phase and grown on the MgO(1 0 0) surface containing Fs-defects, has been investigated by a density functional basin-hopping (DF-BH) approach. In analogy with what observed in the case of gold clusters, it is found that the presence of the defect implies a double frustration and a cylindrical invariance of the metal-surface interaction, causing small Ag clusters growing around the Fs defect to be highly fluxional. Nevertheless, two different structural crossovers are found to be induced by the metal-defect interaction for the adsorbed clusters such that: 1) planar structures prevail for N<or=4 (as in the gas phase); 2) noncrystalline (fivefold symmetric) structures, which are the lowest energy ones in the gas phase for medium sized AgN clusters (N>or=7), prevail for N=6 and N=8; 3) distorted face-centered cubic (fcc) structures grown pseudomorphically on the defected surface prevail for N=10. The transition from fivefold to fcc motifs is rationalized in terms of the double-frustration effect, which increases the bond strain of the noncrystalline structures. Detrapping energies from the defect were also calculated; the lowest energy pathway corresponds to the detachment of a dimer.
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Affiliation(s)
- Giovanni Barcaro
- Molecular Modeling Laboratory, IPCF-CNR, Via G. Moruzzi 1, Pisa, 56124, Italy
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19
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Cinquini F, Valentin CD, Finazzi E, Giordano L, Pacchioni G. Theory of oxides surfaces, interfaces and supported nano-clusters. Theor Chem Acc 2006. [DOI: 10.1007/s00214-006-0204-3] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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20
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Ab initio thermodynamics for the growth of ultra-thin Cu film on a perfect MgO(001) surface. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2005. [DOI: 10.1016/j.msec.2005.06.018] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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21
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Neyman KM, Illas F. Theoretical aspects of heterogeneous catalysis: Applications of density functional methods. Catal Today 2005. [DOI: 10.1016/j.cattod.2005.04.006] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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22
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Neyman KM, Inntam C, Gordienko AB, Yudanov IV, Rösch N. Adsorption of carbon on Pd clusters of nanometer size: A first-principles theoretical study. J Chem Phys 2005; 122:174705. [PMID: 15910058 DOI: 10.1063/1.1888385] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Adsorbed atomic C species can be formed in the course of surface reactions and commonly decorate metal catalysts. We studied computationally C adsorption on Pd nanoclusters using an all-electron scalar relativistic density functional method. The metal particles under investigation, Pd(55), Pd(79), Pd(85), Pd(116), Pd(140), and Pd(146), were chosen as fragments of bulk Pd in the form of three-dimensional octahedral or cuboctahedral crystallites, exposing (111) and (100) facets as well as edge sites. These cluster models are shown to yield size-converged adsorption energies. We examined which surface sites of these clusters are preferentially occupied by adsorbed C. According to calculations, surface C atoms form strongly adsorbed carbide species (with adsorption energies of more than 600 kJ mol(-1)) bearing a significant negative charge. Surface sites allowing high, fourfold coordination of carbon are overall favored. To avoid effects of adsorbate-adsorbate interaction in the cluster models for carbon species in the vicinity of cluster edges, we reduced the local symmetry of selected adsorption complexes on the nanoclusters by lowering the global symmetry of the nanocluster models from point group O(h) to D(4h). On (111) facets, threefold hollow sites in the center are energetically preferred; adsorbed C is calculated to be slightly less stable when displaced to the facet borders.
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Affiliation(s)
- Konstantin M Neyman
- Institució Catalana de Recerca i Estudis Avançats (ICREA), Barcelona, Spain.
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Del Vitto A, Sousa C, Illas F, Pacchioni G. Optical properties of Cu nanoclusters supported on MgO(100). J Chem Phys 2004; 121:7457-66. [PMID: 15473820 DOI: 10.1063/1.1796311] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The vertical transitions of Cu atoms, dimers, and tetramers deposited on the MgO surface have been investigated by means of ab initio calculations based either on complete active space second-order perturbation theory or on time-dependent density functional theory. Three adsorption sites have been considered as representative of the complexity of the MgO surface: regular sites at flat (100) terraces, extended defects such as monoatomic steps, and point defects such as neutral oxygen vacancies (F or color centers). The optical properties of the supported Cu clusters have been compared with those of the corresponding gas-phase units. Upon deposition a substantial modification of the energy levels of the supported cluster is induced by the Pauli repulsion with the substrate. This causes shifts in the optical transitions going from free to supported clusters. The changes in cluster geometry induced by the substrate have a much smaller effect on the optical absorption bands. On F centers the presence of filled impurity levels in the band gap of MgO results in a strong mixing with the empty levels of the Cu atoms and clusters with consequent deep changes in the optical properties of the color centers. The results allow to interpret electron energy loss spectra of Cu atoms deposited on MgO thin films.
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Affiliation(s)
- Annalisa Del Vitto
- Dipartimento di Scienza dei Materiali, Università di Milano-Bicocca, via R. Cozzi 53,I-20125 Milano, Italy
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25
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Supported metal species and adsorption complexes on metal oxides and in zeolites: Density functional cluster model studies. ACTA ACUST UNITED AC 2004. [DOI: 10.1016/s1380-7323(04)80025-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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26
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Herschend B, Hermansson K, Alfredsson M, Zhukovskii YF, Kotomin EA, Jacobs PWM. Characterization of the Metal−Ceramic Bonding in the Ag/MgO(001) Interface from ab Initio Calculations. J Phys Chem B 2003. [DOI: 10.1021/jp030305a] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Björn Herschend
- Department of Materials Chemistry, The Ångström Laboratory, Uppsala University, Box 538, S-751 21 Uppsala, Sweden, Institute of Solid State Physics, University of Latvia, 8 Kengaraga, Riga LV-1063, Latvia, and Department of Chemistry, University of Western Ontario, N6A 5B7 London, Canada
| | - Kersti Hermansson
- Department of Materials Chemistry, The Ångström Laboratory, Uppsala University, Box 538, S-751 21 Uppsala, Sweden, Institute of Solid State Physics, University of Latvia, 8 Kengaraga, Riga LV-1063, Latvia, and Department of Chemistry, University of Western Ontario, N6A 5B7 London, Canada
| | - Maria Alfredsson
- Department of Materials Chemistry, The Ångström Laboratory, Uppsala University, Box 538, S-751 21 Uppsala, Sweden, Institute of Solid State Physics, University of Latvia, 8 Kengaraga, Riga LV-1063, Latvia, and Department of Chemistry, University of Western Ontario, N6A 5B7 London, Canada
| | - Yuri F. Zhukovskii
- Department of Materials Chemistry, The Ångström Laboratory, Uppsala University, Box 538, S-751 21 Uppsala, Sweden, Institute of Solid State Physics, University of Latvia, 8 Kengaraga, Riga LV-1063, Latvia, and Department of Chemistry, University of Western Ontario, N6A 5B7 London, Canada
| | - Eugene A. Kotomin
- Department of Materials Chemistry, The Ångström Laboratory, Uppsala University, Box 538, S-751 21 Uppsala, Sweden, Institute of Solid State Physics, University of Latvia, 8 Kengaraga, Riga LV-1063, Latvia, and Department of Chemistry, University of Western Ontario, N6A 5B7 London, Canada
| | - Patrick W. M. Jacobs
- Department of Materials Chemistry, The Ångström Laboratory, Uppsala University, Box 538, S-751 21 Uppsala, Sweden, Institute of Solid State Physics, University of Latvia, 8 Kengaraga, Riga LV-1063, Latvia, and Department of Chemistry, University of Western Ontario, N6A 5B7 London, Canada
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Jug K, Geudtner G. Bond energies for molecules, clusters, and deposit systems. J Comput Chem 2003; 24:2013-22. [PMID: 14531055 DOI: 10.1002/jcc.10343] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
A new approach is suggested to the assignment of bond energies in molecules and clusters. It uses a shareholder principle for the redistribution of the shifts in atomic energies, which arise in a molecule, on the bonds. The scheme is directly suitable for semiempirical methods, where only one- and two-center terms occur. MSINDO calculations are performed to demonstrate the suitability of the approach for molecules and clusters. As an application the bonding in a deposit system is analyzed for the case of copper on magnesium oxide. It is found that copper atoms do not only bind to the preferred oxygen sites but also substantially to the magnesium sites. The copper-copper bonds are the strongest and will determine the structure of copper clusters on magnesium oxide surfaces.
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Affiliation(s)
- Karl Jug
- Theoretische Chemie, Universität Hannover, Am Kleinen Felde 30, 30167 Hannover, Germany.
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28
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Gomes JRB, Lodziana Z, Illas F. Adsorption of Small Palladium Clusters on the Relaxed α-Al2O3(0001) Surface. J Phys Chem B 2003. [DOI: 10.1021/jp022520h] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- J. R. B. Gomes
- Departament de Química Física i Centre de Recerca en Química Teòrica, Universitat de Barcelona i Parc Científic de Barcelona, C/ Martí i Franquès 1, E-08028 Barcelona, Spain, and Center for Atomic Scale Materials Physics, DTU, Building 307, DK-2800 Lyngby, Denmark
| | - Z. Lodziana
- Departament de Química Física i Centre de Recerca en Química Teòrica, Universitat de Barcelona i Parc Científic de Barcelona, C/ Martí i Franquès 1, E-08028 Barcelona, Spain, and Center for Atomic Scale Materials Physics, DTU, Building 307, DK-2800 Lyngby, Denmark
| | - F. Illas
- Departament de Química Física i Centre de Recerca en Química Teòrica, Universitat de Barcelona i Parc Científic de Barcelona, C/ Martí i Franquès 1, E-08028 Barcelona, Spain, and Center for Atomic Scale Materials Physics, DTU, Building 307, DK-2800 Lyngby, Denmark
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29
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DOMINGUEZ-ARIZA DAVID, ILLAS FRANCESC, BREDOW THOMAS, DI VALENTIN CRISTIANA, PACCHIONI GIANFRANCO. The treatment of the spin coupling in the bonding of NO to the Ni-doped MgO (100) surface. Mol Phys 2003. [DOI: 10.1080/0026897021000026863] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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30
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Yudanov IV, Sahnoun R, Neyman KM, Rösch N. Metal nanoparticles as models of single crystal surfaces and supported catalysts: Density functional study of size effects for CO/Pd(111). J Chem Phys 2002. [DOI: 10.1063/1.1516798] [Citation(s) in RCA: 134] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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31
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Lopez N, Paniagua JC, Illas F. Controlling the spin of metal atoms adsorbed on oxide surfaces: Ni on regular and defective sites of the MgO(001) surface. J Chem Phys 2002. [DOI: 10.1063/1.1515733] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Rodriguez JA, Etxeberria A, González L, Maiti A. Structural and electronic properties of PbTiO3, PbZrO3, and PbZr0.5Ti0.5O3: First-principles density-functional studies. J Chem Phys 2002. [DOI: 10.1063/1.1490343] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Abstract
The calormetically measured heats of adsorption of Cu, Ag, and Pb on MgO(100), previously measured in our group, are correlated with bulk properties of the metals and their sticking probabilities and film morphologies. The low-coverage heats of adsorption (when the metals are mainly in two-dimensional (2D) islands) are used to estimate metal-MgO(100) bond energies within a pairwise bond additivity model. These values correlate well with the observed initial sticking probabilities and saturation island densities of the metals. This supports a transient mobile precursor model for adsorption. The values also correlate with their bulk sublimation energies, which suggests that covalent metal-Mg bonding dominates the interaction at low coverage, probably due to very strong bonding at defects. The heats of adsorption integrated up to multilayer coverages provide the metal-MgO(100) adhesion energies and metal-MgO(100) bond energies for metals in 3D films. These values correlate with the sum of magnitudes of the metal's bulk sublimation energy plus the heat of formation of the bulk oxide of the metal per mole of metal atoms. This suggests that local chemical bonds, both metal-oxygen and covalent metal-Mg, dominate the interfacial bonding for 3D films.
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Affiliation(s)
- Charles T Campbell
- Department of Chemistry, Box 351700, University of Washington, Seattle, Washington 98195-1700, USA.
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34
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Di Valentin C, Pacchioni G, Bredow T, Dominguez-Ariza D, Illas F. Bonding of NO to NiO(100) and NixMg1−xO(100) surfaces: A challenge for theory. J Chem Phys 2002. [DOI: 10.1063/1.1490923] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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35
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Vittadini A, Selloni A. Small gold clusters on stoichiometric and defected TiO2 anatase (101) and their interaction with CO: A density functional study. J Chem Phys 2002. [DOI: 10.1063/1.1481376] [Citation(s) in RCA: 124] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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36
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Ferrari AM, Giordano L, Pacchioni G, Abbet S, Heiz U. Selectivity of Surface Defects for the Activation of Supported Metal Atoms: Acetylene Cyclotrimerization on Pd1/MgO. J Phys Chem B 2002. [DOI: 10.1021/jp013766+] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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37
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Gomes JRB, Illas F, Hernández NC, Sanz JF, Wander A, Harrison NM. Surface model and exchange-correlation functional effects on the description of Pd/α-Al2O3(0001). J Chem Phys 2002. [DOI: 10.1063/1.1429642] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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38
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Valcarcel A, Ricart JM, Clotet A, Markovits A, Minot C, Illas F. Structure and bonding of propyne on Cu(111) from density functional periodic and cluster models. J Chem Phys 2002. [DOI: 10.1063/1.1428351] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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39
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Markovits A, Skalli MK, Minot C, Pacchioni G, López N, Illas F. The competition between chemical bonding and magnetism in the adsorption of atomic Ni on MgO(100). J Chem Phys 2001. [DOI: 10.1063/1.1407824] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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40
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Rodriguez JA, Ricart JM, Clotet A, Illas F. Density functional studies on the adsorption and decomposition of SO2 on Cu(100). J Chem Phys 2001. [DOI: 10.1063/1.1377884] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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41
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Gomes J, Moreira IP, Reinhardt P, Wander A, Searle B, Harrison N, Illas F. The structural relaxation of the α-Al2O3(0001) – an investigation of potential errors. Chem Phys Lett 2001. [DOI: 10.1016/s0009-2614(01)00500-0] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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42
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López N, Illas F, Pacchioni G. Vibrational frequencies of CO adsorbed on silica supported Mo atoms from density functional calculations. ACTA ACUST UNITED AC 2001. [DOI: 10.1016/s1381-1169(01)00058-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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43
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Lopez N. Effect of the basicity of the support on the properties of deposited metal atoms. J Chem Phys 2001. [DOI: 10.1063/1.1335818] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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44
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45
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Rodriguez JA, Hrbek J, Kuhn M, Jirsak T, Chaturvedi S, Maiti A. Interaction of sulfur with Pt(111) and Sn/Pt(111): Effects of coverage and metal–metal bonding on reactivity toward sulfur. J Chem Phys 2000. [DOI: 10.1063/1.1327249] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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46
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Fuks D, Dorfman S, Kotomin EA, Zhukovskii YF. Theoretical analysis of the growth mode for thin metallic films on oxide substrates. PHYSICAL REVIEW LETTERS 2000; 85:4333-4336. [PMID: 11060631 DOI: 10.1103/physrevlett.85.4333] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2000] [Indexed: 05/23/2023]
Abstract
We show how the growth mode of a thin metallic film on an insulating substrate can be predicted theoretically by combining thermodynamic considerations with ab initio calculations for ordered metal/insulator interfaces at low coverage. Our approach is illustrated by calculations for Ag film deposited on an MgO substrate. Ab initio calculations predict high mobility of adsorbed Ag atoms on MgO, even at low temperatures, which greatly aids their aggregation.
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Affiliation(s)
- D Fuks
- Materials Engineering Department, Ben Gurion University of the Negev, Beer-Sheva 84105, Israel and and Fachbereich Physik, Osnabruck Universitat, Osnabruck, 49069, Germany
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47
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Cai S, Neyman KM, Hu A, Rösch N. Tungsten Atoms and Clusters Adsorbed on the MgO(001) Surface: A Density Functional Study. J Phys Chem B 2000. [DOI: 10.1021/jp002538x] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Shuhui Cai
- Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany
| | - Konstantin M. Neyman
- Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany
| | - Anguang Hu
- Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany
| | - Notker Rösch
- Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany
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48
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49
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Ferrari AM, Giordano L, Rösch N, Heiz U, Abbet S, Sanchez A, Pacchioni G. Role of Surface Defects in the Activation of Supported Metals: A Quantum-Chemical Study of Acetylene Cyclotrimerization on Pd1/MgO. J Phys Chem B 2000. [DOI: 10.1021/jp0023821] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Anna Maria Ferrari
- Dipartimento di Scienza dei Materiali, Università Milano-Bicocca and Istituto Nazionale per la Fisica della Materia, via R. Cozzi 53, I-20125 Milano, Italy, Dipartimento di Chimica IFM, Università di Torino, via P. Giuria 5, I-10125 Italy, Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany, and Institut de Physique de la Matière Condensée, Université de Lausanne, CH-1015 Lausanne, Switzerland
| | - Livia Giordano
- Dipartimento di Scienza dei Materiali, Università Milano-Bicocca and Istituto Nazionale per la Fisica della Materia, via R. Cozzi 53, I-20125 Milano, Italy, Dipartimento di Chimica IFM, Università di Torino, via P. Giuria 5, I-10125 Italy, Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany, and Institut de Physique de la Matière Condensée, Université de Lausanne, CH-1015 Lausanne, Switzerland
| | - Notker Rösch
- Dipartimento di Scienza dei Materiali, Università Milano-Bicocca and Istituto Nazionale per la Fisica della Materia, via R. Cozzi 53, I-20125 Milano, Italy, Dipartimento di Chimica IFM, Università di Torino, via P. Giuria 5, I-10125 Italy, Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany, and Institut de Physique de la Matière Condensée, Université de Lausanne, CH-1015 Lausanne, Switzerland
| | - Ulrich Heiz
- Dipartimento di Scienza dei Materiali, Università Milano-Bicocca and Istituto Nazionale per la Fisica della Materia, via R. Cozzi 53, I-20125 Milano, Italy, Dipartimento di Chimica IFM, Università di Torino, via P. Giuria 5, I-10125 Italy, Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany, and Institut de Physique de la Matière Condensée, Université de Lausanne, CH-1015 Lausanne, Switzerland
| | - Stéphane Abbet
- Dipartimento di Scienza dei Materiali, Università Milano-Bicocca and Istituto Nazionale per la Fisica della Materia, via R. Cozzi 53, I-20125 Milano, Italy, Dipartimento di Chimica IFM, Università di Torino, via P. Giuria 5, I-10125 Italy, Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany, and Institut de Physique de la Matière Condensée, Université de Lausanne, CH-1015 Lausanne, Switzerland
| | - Antonio Sanchez
- Dipartimento di Scienza dei Materiali, Università Milano-Bicocca and Istituto Nazionale per la Fisica della Materia, via R. Cozzi 53, I-20125 Milano, Italy, Dipartimento di Chimica IFM, Università di Torino, via P. Giuria 5, I-10125 Italy, Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany, and Institut de Physique de la Matière Condensée, Université de Lausanne, CH-1015 Lausanne, Switzerland
| | - Gianfranco Pacchioni
- Dipartimento di Scienza dei Materiali, Università Milano-Bicocca and Istituto Nazionale per la Fisica della Materia, via R. Cozzi 53, I-20125 Milano, Italy, Dipartimento di Chimica IFM, Università di Torino, via P. Giuria 5, I-10125 Italy, Institut für Physikalische und Theoretische Chemie, Technische Universität München, 85747 Garching, Germany, and Institut de Physique de la Matière Condensée, Université de Lausanne, CH-1015 Lausanne, Switzerland
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50
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Rodriguez JA, Jirsak T, Freitag A, Larese JZ, Maiti A. Interaction of SO2 with MgO(100) and Cu/MgO(100): Decomposition Reactions and the Formation of SO3 and SO4. J Phys Chem B 2000. [DOI: 10.1021/jp000806l] [Citation(s) in RCA: 73] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- José A. Rodriguez
- Department of Chemistry, Brookhaven National Laboratory, Upton, New York 11973
| | - Tomas Jirsak
- Department of Chemistry, Brookhaven National Laboratory, Upton, New York 11973
| | - Andrea Freitag
- Department of Chemistry, Brookhaven National Laboratory, Upton, New York 11973
| | - John Z. Larese
- Department of Chemistry, Brookhaven National Laboratory, Upton, New York 11973
| | - Amitesh Maiti
- Molecular Simulations Inc., 9685 Scranton Road, San Diego, California 92121
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