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Dasgupta S, Palos E, Pan Y, Paesani F. Balance between Physical Interpretability and Energetic Predictability in Widely Used Dispersion-Corrected Density Functionals. J Chem Theory Comput 2024; 20:49-67. [PMID: 38150541 DOI: 10.1021/acs.jctc.3c00903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2023]
Abstract
We assess the performance of different dispersion models for several popular density functionals across a diverse set of noncovalent systems, ranging from the benzene dimer to molecular crystals. By analyzing the interaction energies and their individual components, we demonstrate that there exists variability across different systems for empirical dispersion models, which are calibrated for reproducing the interaction energies of specific systems. Thus, parameter fitting may undermine the underlying physics, as dispersion models rely on error compensation among the different components of the interaction energy. Energy decomposition analyses reveal that, the accuracy of revPBE-D3 for some aqueous systems originates from significant compensation between dispersion and charge transfer energies. However, revPBE-D3 is less accurate in describing systems where error compensation is incomplete, such as the benzene dimer. Such cases highlight the propensity for unpredictable behavior in various dispersion-corrected density functionals across a wide range of molecular systems, akin to the behavior of force fields. On the other hand, we find that SCAN-rVV10, a targeted-dispersion approach, affords significant reductions in errors associated with the lattice energies of molecular crystals, while it has limited accuracy in reproducing structural properties. Given the ubiquitous nature of noncovalent interactions and the key role of density functional theory in computational sciences, the future development of dispersion models should prioritize the faithful description of the dispersion energy, a shift that promises greater accuracy in capturing the underlying physics across diverse molecular and extended systems.
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Affiliation(s)
- Saswata Dasgupta
- Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, California 92093, United States
| | - Etienne Palos
- Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, California 92093, United States
| | - Yuanhui Pan
- Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, California 92093, United States
| | - Francesco Paesani
- Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, California 92093, United States
- Materials Science and Engineering, University of California San Diego, La Jolla, California 92093, United States
- San Diego Supercomputer Center, University of California San Diego, La Jolla, California 92093, United States
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2
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Spiegelman F, Tarrat N, Cuny J, Dontot L, Posenitskiy E, Martí C, Simon A, Rapacioli M. Density-functional tight-binding: basic concepts and applications to molecules and clusters. ADVANCES IN PHYSICS: X 2020; 5:1710252. [PMID: 33154977 PMCID: PMC7116320 DOI: 10.1080/23746149.2019.1710252] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2019] [Accepted: 12/19/2019] [Indexed: 06/10/2023] Open
Abstract
The scope of this article is to present an overview of the Density Functional based Tight Binding (DFTB) method and its applications. The paper introduces the basics of DFTB and its standard formulation up to second order. It also addresses methodological developments such as third order expansion, inclusion of non-covalent interactions, schemes to solve the self-interaction error, implementation of long-range short-range separation, treatment of excited states via the time-dependent DFTB scheme, inclusion of DFTB in hybrid high-level/low level schemes (DFT/DFTB or DFTB/MM), fragment decomposition of large systems, large scale potential energy landscape exploration with molecular dynamics in ground or excited states, non-adiabatic dynamics. A number of applications are reviewed, focusing on -(i)- the variety of systems that have been studied such as small molecules, large molecules and biomolecules, bare orfunctionalized clusters, supported or embedded systems, and -(ii)- properties and processes, such as vibrational spectroscopy, collisions, fragmentation, thermodynamics or non-adiabatic dynamics. Finally outlines and perspectives are given.
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Affiliation(s)
- Fernand Spiegelman
- Laboratoire de Chimie et Physique Quantiques LCPQ/IRSAMC, UMR5626, Université de Toulouse (UPS)and CNRS, Toulouse, France
| | - Nathalie Tarrat
- CEMES, Université de Toulouse (UPS), CNRS, UPR8011, Toulouse, Toulouse, France
| | - Jérôme Cuny
- Laboratoire de Chimie et Physique Quantiques LCPQ/IRSAMC, UMR5626, Université de Toulouse (UPS)and CNRS, Toulouse, France
| | - Leo Dontot
- Laboratoire de Chimie et Physique Quantiques LCPQ/IRSAMC, UMR5626, Université de Toulouse (UPS)and CNRS, Toulouse, France
| | - Evgeny Posenitskiy
- Laboratoire Collisions Agrégats et Réactivité LCAR/IRSAMC, UMR5589, Université de Toulouse (UPS) and CNRS, Toulouse, France
| | - Carles Martí
- Laboratoire de Chimie et Physique Quantiques LCPQ/IRSAMC, UMR5626, Université de Toulouse (UPS)and CNRS, Toulouse, France
- Laboratoire de Chimie, UMR5182, Ecole Normale Supérieure de Lyon, Université de Lyon and CNRS, Lyon, France
| | - Aude Simon
- Laboratoire de Chimie et Physique Quantiques LCPQ/IRSAMC, UMR5626, Université de Toulouse (UPS)and CNRS, Toulouse, France
| | - Mathias Rapacioli
- Laboratoire de Chimie et Physique Quantiques LCPQ/IRSAMC, UMR5626, Université de Toulouse (UPS)and CNRS, Toulouse, France
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Sedlak R, Řezáč J. Empirical D3 Dispersion as a Replacement for ab Initio Dispersion Terms in Density Functional Theory-Based Symmetry-Adapted Perturbation Theory. J Chem Theory Comput 2017; 13:1638-1646. [DOI: 10.1021/acs.jctc.6b01198] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Robert Sedlak
- Institute
of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 166 10 Prague 6, Czech Republic
- Regional
Centre of Advanced Technologies and Materials, Department of Physical
Chemistry, Palacký University, 771 46 Olomouc, Czech Republic
| | - Jan Řezáč
- Institute
of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 166 10 Prague 6, Czech Republic
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4
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Dizon JB, Johnson ER. van der Waals potential energy surfaces from the exchange-hole dipole moment dispersion model. CAN J CHEM 2016. [DOI: 10.1139/cjc-2016-0215] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The potential energy surfaces (PESs) of 28 simple van der Waals complexes, each consisting of a rare-gas (Rg) atom interacting with a linear molecule, are calculated using the exchange-hole dipole moment (XDM) dispersion model in conjunction with three base density functionals (HFPBE, PW86PBE, and a commensurate hybrid functional). Results are compared with literature coupled-cluster reference data. The quality of the computed PESs is assessed based on the positions of the global minima and the corresponding binding energies. Only the hybrid functional is found to provide generally reliable PESs. Dispersion-corrected HFPBE strongly underestimates the equilibrium intermolecular separations and predicts different global minima than the reference PESs for Rg–HCl, Rg–HBr, and two of the Rg–HCN complexes. Analysis of the binding-energy errors reveals that the performance of HFPBE degrades as the size of the Rg atoms increase down the group, while the performance of PW86PBE is significantly worse for strongly-polar molecules. PW86PBE, and to a lesser extent the hybrid, strongly overbind Kr–HF due to charge-transfer error. Despite this, the XDM-corrected hybrid functional displays the best overall error statistics and provides binding energies to within ca. 10 cm–1 of the coupled-cluster reference data at a greatly reduced computational cost.
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Affiliation(s)
- Joseph B. Dizon
- Department of Mathematics, San Francisco State University, 1600 Holloway Ave., San Francisco, CA 94132, USA
| | - Erin R. Johnson
- Department of Chemistry, Dalhousie University, 6274 Coburg Road, Halifax, NS B3H 4R2, Canada
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DiLabio GA, Otero-de-la-Roza A. Noncovalent Interactions in Density Functional Theory. REVIEWS IN COMPUTATIONAL CHEMISTRY 2016. [DOI: 10.1002/9781119148739.ch1] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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6
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Grimme S, Hansen A, Brandenburg JG, Bannwarth C. Dispersion-Corrected Mean-Field Electronic Structure Methods. Chem Rev 2016; 116:5105-54. [DOI: 10.1021/acs.chemrev.5b00533] [Citation(s) in RCA: 799] [Impact Index Per Article: 99.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Stefan Grimme
- Mulliken Center for Theoretical
Chemistry, Universität Bonn, 53113 Bonn, Germany
| | - Andreas Hansen
- Mulliken Center for Theoretical
Chemistry, Universität Bonn, 53113 Bonn, Germany
| | | | - Christoph Bannwarth
- Mulliken Center for Theoretical
Chemistry, Universität Bonn, 53113 Bonn, Germany
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7
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Hoffmann A, Grunzke R, Herres-Pawlis S. Insights into the influence of dispersion correction in the theoretical treatment of guanidine-quinoline copper(I) complexes. J Comput Chem 2014; 35:1943-50. [DOI: 10.1002/jcc.23706] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2014] [Revised: 07/14/2014] [Accepted: 07/16/2014] [Indexed: 01/22/2023]
Affiliation(s)
- Alexander Hoffmann
- Department of Chemistry; Ludwig-Maximilians-Universität München, Butenandtstr. 5 - 13; 81377 München Germany
| | - Richard Grunzke
- Zentrum für Informationsdienste und Hochleistungsrechnen; Technische Universität Dresden; Zellescher Weg 12-14 01062 Dresden Germany
| | - Sonja Herres-Pawlis
- Department of Chemistry; Ludwig-Maximilians-Universität München, Butenandtstr. 5 - 13; 81377 München Germany
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9
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Brandenburg JG, Grimme S. Dispersion corrected hartree-fock and density functional theory for organic crystal structure prediction. Top Curr Chem (Cham) 2013; 345:1-23. [PMID: 24220994 DOI: 10.1007/128_2013_488] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
Abstract
We present and evaluate dispersion corrected Hartree-Fock (HF) and Density Functional Theory (DFT) based quantum chemical methods for organic crystal structure prediction. The necessity of correcting for missing long-range electron correlation, also known as van der Waals (vdW) interaction, is pointed out and some methodological issues such as inclusion of three-body dispersion terms are discussed. One of the most efficient and widely used methods is the semi-classical dispersion correction D3. Its applicability for the calculation of sublimation energies is investigated for the benchmark set X23 consisting of 23 small organic crystals. For PBE-D3 the mean absolute deviation (MAD) is below the estimated experimental uncertainty of 1.3 kcal/mol. For two larger π-systems, the equilibrium crystal geometry is investigated and very good agreement with experimental data is found. Since these calculations are carried out with huge plane-wave basis sets they are rather time consuming and routinely applicable only to systems with less than about 200 atoms in the unit cell. Aiming at crystal structure prediction, which involves screening of many structures, a pre-sorting with faster methods is mandatory. Small, atom-centered basis sets can speed up the computation significantly but they suffer greatly from basis set errors. We present the recently developed geometrical counterpoise correction gCP. It is a fast semi-empirical method which corrects for most of the inter- and intramolecular basis set superposition error. For HF calculations with nearly minimal basis sets, we additionally correct for short-range basis incompleteness. We combine all three terms in the HF-3c denoted scheme which performs very well for the X23 sublimation energies with an MAD of only 1.5 kcal/mol, which is close to the huge basis set DFT-D3 result.
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Affiliation(s)
- Jan Gerit Brandenburg
- Mulliken Center for Theoretical Chemistry, Institut für Physikalische und Theoretische Chemie der Universität Bonn, Beringstraße 4, 53115, Bonn, Germany,
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10
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Ehrlich S, Moellmann J, Reckien W, Bredow T, Grimme S. System-dependent dispersion coefficients for the DFT-D3 treatment of adsorption processes on ionic surfaces. Chemphyschem 2011; 12:3414-20. [PMID: 22012803 DOI: 10.1002/cphc.201100521] [Citation(s) in RCA: 201] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2011] [Indexed: 11/09/2022]
Abstract
Dispersion-corrected density functional theory calculations (DFT-D3) were performed for the adsorption of CO on MgO and C(2) H(2) on NaCl surfaces. An extension of our non-empirical scheme for the computation of atom-in-molecules dispersion coefficients is proposed. It is based on electrostatically embedded M(4)X(4) (M=Na, Mg) clusters that are used in TDDFT calculations of dynamic dipole polarizabilities. We find that the C(MM)(6) dispersion coefficients for bulk NaCl and MgO are reduced by factors of about 100 and 35 for Na and Mg, respectively, compared to the values of the free atoms. These are used in periodic DFT calculations with the revPBE semi-local density functional. As demonstrated by calculations of adsorption potential energy curves, the new C(6) coefficients lead to much more accurate energies (E(ads)) and molecule-surface distances than with previous DFT-D schemes. For NaCl/C(2) H(2) we obtained at the revPBE-D3(BJ) level a value of E(ads) =-7.4 kcal mol(-1) in good agreement with experimental data (-5.7 to -7.1 kcal mol(-1)). Dispersion-uncorrected DFT yields an unbound surface state. For the MgO/CO system, the computed revPBE-D3(BJ) value of E(ads) =-4.1 kcal mol(-1) is also in reasonable agreement with experimental results (-3.0 kcal mol(-1)) when thermal corrections are taken into account. Our new dispersion correction also improves computed lattice constants of the bulk systems significantly compared to plain DFT or previous DFT-D results. The extended DFT-D3 scheme also provides accurate non-covalent interactions for ionic systems without empirical adjustments and is suggested as a general tool in surface science.
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Affiliation(s)
- Stephan Ehrlich
- Theoretische Organische Chemie, Organisch-Chemisches Institut der Universität Münster, Corrensstrasse 40, 48149 Münster, Germany
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11
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Baer MD, Mundy CJ, McGrath MJ, Kuo IFW, Siepmann JI, Tobias DJ. Re-examining the properties of the aqueous vapor–liquid interface using dispersion corrected density functional theory. J Chem Phys 2011; 135:124712. [DOI: 10.1063/1.3633239] [Citation(s) in RCA: 75] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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12
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Paesani F. Hydrogen bond dynamics in heavy water studied with quantum dynamical simulations. Phys Chem Chem Phys 2011; 13:19865-75. [PMID: 21892511 DOI: 10.1039/c1cp21863h] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The structure and dynamics of the hydrogen-bond network in heavy water (D(2)O) is studied as a function of the temperature using quantum dynamical simulations. Our approach combines an ab initio-based representation of the water interactions with an explicit quantum treatment of the molecular motion. A direct connection between the calculated linear and nonlinear vibrational spectra and the underlying molecular dynamics is made, which provides new insights into the rearrangement of the hydrogen-bond network in heavy water. A comparison with previous calculations on liquid H(2)O suggests that tunneling does not effectively contribute to the dynamics of the water hydrogen-bond network above the melting point. However, the effects of nuclear quantization are not negligible at all temperatures and become increasingly important near the melting point, which is in agreement with recent experimental analysis of the structural properties of liquid water as well as of the proton momentum distribution in supercooled water.
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Affiliation(s)
- Francesco Paesani
- Department of Chemistry and Biochemistry, University of California, La Jolla, San Diego, CA 92093, USA.
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13
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Møgelhøj A, Kelkkanen AK, Wikfeldt KT, Schiøtz J, Mortensen JJ, Pettersson LGM, Lundqvist BI, Jacobsen KW, Nilsson A, Nørskov JK. Ab Initio van der Waals Interactions in Simulations of Water Alter Structure from Mainly Tetrahedral to High-Density-Like. J Phys Chem B 2011; 115:14149-60. [DOI: 10.1021/jp2040345] [Citation(s) in RCA: 80] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Andreas Møgelhøj
- Center for Atomic-Scale Materials Design (CAMD), Department, of Physics, Building 307, Nano DTU, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark
- Stanford Synchrotron Radiation Lightsource, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - André K. Kelkkanen
- Center for Atomic-Scale Materials Design (CAMD), Department, of Physics, Building 307, Nano DTU, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark
| | - K. Thor Wikfeldt
- Department of Physics, AlbaNova, Stockholm University, SE-106 91 Stockholm, Sweden
| | - Jakob Schiøtz
- Center for Individual Nanoparticle Functionality (CINF), Department of Physics, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark
| | - Jens Jørgen Mortensen
- Center for Atomic-Scale Materials Design (CAMD), Department, of Physics, Building 307, Nano DTU, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark
| | | | - Bengt I. Lundqvist
- Center for Atomic-Scale Materials Design (CAMD), Department, of Physics, Building 307, Nano DTU, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark
- Department of Applied Physics, Chalmers University of Technology, SE-412 96 Göteborg, Sweden
| | - Karsten W. Jacobsen
- Center for Atomic-Scale Materials Design (CAMD), Department, of Physics, Building 307, Nano DTU, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark
| | - Anders Nilsson
- Stanford Synchrotron Radiation Lightsource, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Jens K. Nørskov
- Center for Atomic-Scale Materials Design (CAMD), Department, of Physics, Building 307, Nano DTU, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark
- Stanford Synchrotron Radiation Lightsource, 2575 Sand Hill Road, Menlo Park, California 94025, United States
- Department of Chemical Engineering, Stanford University, Stanford, California 94305, United States
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14
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Grimme S. Density functional theory with London dispersion corrections. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2011. [DOI: 10.1002/wcms.30] [Citation(s) in RCA: 1495] [Impact Index Per Article: 115.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Stefan Grimme
- Theoretische Organische Chemie, Organisch‐Chemisches Institut der Universität Münster, Münster, Germany
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15
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Grimme S, Ehrlich S, Goerigk L. Effect of the damping function in dispersion corrected density functional theory. J Comput Chem 2011; 32:1456-65. [DOI: 10.1002/jcc.21759] [Citation(s) in RCA: 11491] [Impact Index Per Article: 883.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2010] [Revised: 12/22/2010] [Accepted: 12/28/2010] [Indexed: 01/21/2023]
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16
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Hujo W, Grimme S. Comparison of the performance of dispersion-corrected density functional theory for weak hydrogen bonds. Phys Chem Chem Phys 2011; 13:13942-50. [DOI: 10.1039/c1cp20591a] [Citation(s) in RCA: 117] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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17
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Rapacioli M, Spiegelman F, Scemama A, Mirtschink A. Modeling Charge Resonance in Cationic Molecular Clusters: Combining DFT-Tight Binding with Configuration Interaction. J Chem Theory Comput 2010; 7:44-55. [DOI: 10.1021/ct100412f] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Mathias Rapacioli
- Université de Toulouse, UPS, LCPQ (Laboratoire de Chimie et Physique Quantiques), IRSAMC, 118 Route de Narbonne, F-31062 Toulouse, France, and CNRS, LCPQ (Laboratoire de Chimie et Physique Quantiques), IRSAMC, F-31062 Toulouse, France
| | - Fernand Spiegelman
- Université de Toulouse, UPS, LCPQ (Laboratoire de Chimie et Physique Quantiques), IRSAMC, 118 Route de Narbonne, F-31062 Toulouse, France, and CNRS, LCPQ (Laboratoire de Chimie et Physique Quantiques), IRSAMC, F-31062 Toulouse, France
| | - Anthony Scemama
- Université de Toulouse, UPS, LCPQ (Laboratoire de Chimie et Physique Quantiques), IRSAMC, 118 Route de Narbonne, F-31062 Toulouse, France, and CNRS, LCPQ (Laboratoire de Chimie et Physique Quantiques), IRSAMC, F-31062 Toulouse, France
| | - André Mirtschink
- Université de Toulouse, UPS, LCPQ (Laboratoire de Chimie et Physique Quantiques), IRSAMC, 118 Route de Narbonne, F-31062 Toulouse, France, and CNRS, LCPQ (Laboratoire de Chimie et Physique Quantiques), IRSAMC, F-31062 Toulouse, France
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18
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Rapacioli M, Spiegelman F, Talbi D, Mineva T, Goursot A, Heine T, Seifert G. Correction for dispersion and Coulombic interactions in molecular clusters with density functional derived methods: application to polycyclic aromatic hydrocarbon clusters. J Chem Phys 2009; 130:244304. [PMID: 19566150 DOI: 10.1063/1.3152882] [Citation(s) in RCA: 82] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
The density functional based tight binding (DFTB) is a semiempirical method derived from the density functional theory (DFT). It inherits therefore its problems in treating van der Waals clusters. A major error comes from dispersion forces, which are poorly described by commonly used DFT functionals, but which can be accounted for by an a posteriori treatment DFT-D. This correction is used for DFTB. The self-consistent charge (SCC) DFTB is built on Mulliken charges which are known to give a poor representation of Coulombic intermolecular potential. We propose to calculate this potential using the class IV/charge model 3 definition of atomic charges. The self-consistent calculation of these charges is introduced in the SCC procedure and corresponding nuclear forces are derived. Benzene dimer is then studied as a benchmark system with this corrected DFTB (c-DFTB-D) method, but also, for comparison, with the DFT-D. Both methods give similar results and are in agreement with references calculations (CCSD(T) and symmetry adapted perturbation theory) calculations. As a first application, pyrene dimer is studied with the c-DFTB-D and DFT-D methods. For coronene clusters, only the c-DFTB-D approach is used, which finds the sandwich configurations to be more stable than the T-shaped ones.
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Affiliation(s)
- Mathias Rapacioli
- Laboratoire de Chimie et Physique Quantiques, IRSAMC, Université de Toulouse, UPS and CNRS, 118 Route de Narbonne, F-31062 Toulouse, France.
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19
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Paesani F, Xantheas SS, Voth GA. Infrared Spectroscopy and Hydrogen-Bond Dynamics of Liquid Water from Centroid Molecular Dynamics with an Ab Initio-Based Force Field. J Phys Chem B 2009; 113:13118-30. [DOI: 10.1021/jp907648y] [Citation(s) in RCA: 114] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Francesco Paesani
- Center for Biophysical Modeling and Simulation and Department of Chemistry, University of Utah, 315 South 1400 East Room 2020, Salt Lake City, Utah 84112-0850, and Chemical and Materials Sciences Division, Pacific Northwest National Laboratory, 902 Battelle Boulevard, P.O. Box 999, MS K1-83, Richland, Washington 99352
| | - Sotiris S. Xantheas
- Center for Biophysical Modeling and Simulation and Department of Chemistry, University of Utah, 315 South 1400 East Room 2020, Salt Lake City, Utah 84112-0850, and Chemical and Materials Sciences Division, Pacific Northwest National Laboratory, 902 Battelle Boulevard, P.O. Box 999, MS K1-83, Richland, Washington 99352
| | - Gregory A. Voth
- Center for Biophysical Modeling and Simulation and Department of Chemistry, University of Utah, 315 South 1400 East Room 2020, Salt Lake City, Utah 84112-0850, and Chemical and Materials Sciences Division, Pacific Northwest National Laboratory, 902 Battelle Boulevard, P.O. Box 999, MS K1-83, Richland, Washington 99352
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López Cacheiro J, Fernández B, Pedersen TB, Koch H. Theoretical absorption spectrum of the Ar–CO van der Waals complex. J Chem Phys 2003. [DOI: 10.1063/1.1570812] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
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21
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Bondo Pedersen T, López Cacheiro J, Fernández B, Koch H. Rovibrational structure of the Ar–CO complex based on a novel three-dimensional ab initio potential. J Chem Phys 2002. [DOI: 10.1063/1.1493180] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
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22
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Wu X, Vargas MC, Nayak S, Lotrich V, Scoles G. Towards extending the applicability of density functional theory to weakly bound systems. J Chem Phys 2001. [DOI: 10.1063/1.1412004] [Citation(s) in RCA: 561] [Impact Index Per Article: 24.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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23
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Gianturco FA, Paesani F. The rovibrational structure of the Ar–CO complex from a model interaction potential. J Chem Phys 2001. [DOI: 10.1063/1.1377604] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
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24
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GIANTURCO FA, PAESANI F. The rovibrational structure of the He-CO complex from a model interaction potential. Mol Phys 2001. [DOI: 10.1080/00268970010028836] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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Elstner M, Hobza P, Frauenheim T, Suhai S, Kaxiras E. Hydrogen bonding and stacking interactions of nucleic acid base pairs: A density-functional-theory based treatment. J Chem Phys 2001. [DOI: 10.1063/1.1329889] [Citation(s) in RCA: 917] [Impact Index Per Article: 39.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Gianturco FA, Paesani F. The He–OCS van der Waals potential from model calculations: Bound states, stable structures, and vibrational couplings. J Chem Phys 2000. [DOI: 10.1063/1.1287055] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Toczyłowski RR, Cybulski SM. Anab initiostudy of the potential energy surface and spectrum of Ar–CO. J Chem Phys 2000. [DOI: 10.1063/1.481043] [Citation(s) in RCA: 63] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Gianturco FA, Lewerenz M, Paesani F, Toennies JP. A stochastic study of microsolvation. II. Structures of CO in small helium clusters. J Chem Phys 2000. [DOI: 10.1063/1.480789] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
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Paesani F, Gianturco FA, Lewerenz M, Toennies JP. A stochastic study of microsolvation. I. Structures of CO in small argon clusters. J Chem Phys 1999. [DOI: 10.1063/1.479983] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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