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Tanaka H, Matsumoto M, Yagasaki T, Takeuchi M, Mori Y, Kono T. Stability mechanism of crystalline CO2 and Xe. J Chem Phys 2024; 161:084501. [PMID: 39177089 DOI: 10.1063/5.0223879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2024] [Accepted: 08/08/2024] [Indexed: 08/24/2024] Open
Abstract
We explore the phase behaviors of simple molecular crystals in order to investigate the molecular basis of the stability mechanism relative to their liquid counterparts. The free energies of the face centered cubic crystals of Xe and CO2 are calculated as a collection of oscillators, and those of the liquids are from an equation of state via molecular dynamics simulations. The vibrational free energy in the solid is separated into the harmonic and anharmonic terms. The harmonic free energies decrease harshly with the expansion of the volume manifested as the large positive Grüneisen parameters, but the anharmonic free energies are positive and increase with volume, both of which originate from the deviation of the potential surface from the parabolic curve. The anharmonic free energies, though less significant in magnitude and destabilize the solids thermodynamically, serve to enhance their mechanical stability. The solid-liquid phase boundaries cannot be settled correctly without the exquisite balance between the two opposing contributions. A sharp contrast regarding the solid free energy is found in low-pressure ice, where the harmonic free energy does not decrease monotonically with volume and its anharmonic free energy is negative.
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Affiliation(s)
- Hideki Tanaka
- Toyota Physical and Chemical Research Institute, Nagakute 480-1192, Japan
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
| | - Masakazu Matsumoto
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
| | - Takuma Yagasaki
- Division of Chemical Engineering, Graduate School of Engineering Science, Osaka University, Osaka 560-8531, Japan
| | - Munetaka Takeuchi
- Ochanomizu University, 2-1-1 Ohtsuka, Bunkyo-ku, Tokyo 112-8610, Japan
| | - Yoshihito Mori
- Ochanomizu University, 2-1-1 Ohtsuka, Bunkyo-ku, Tokyo 112-8610, Japan
| | - Takumi Kono
- Engineering Advancement Association of Japan, 1-11-9 Azabudai, Minato-ku, Tokyo 105-0001, Japan
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Collado P, Piñeiro MM, Pérez-Rodríguez M. Molecular Simulation of CO 2 and H 2 Encapsulation in a Nanoscale Porous Liquid. NANOMATERIALS (BASEL, SWITZERLAND) 2023; 13:409. [PMID: 36770368 PMCID: PMC9920367 DOI: 10.3390/nano13030409] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/30/2022] [Revised: 01/10/2023] [Accepted: 01/14/2023] [Indexed: 06/18/2023]
Abstract
In this study we analyse from a theoretical perspective the encapsulation of both gaseous H2 and CO2 at different conditions of pressure and temperature in a Type II porous liquid, composed by nanometric scale cryptophane-111 molecules dispersed in dichloromethane, using atomistic molecular dynamics. Gaseous H2 tends to occupy cryptophane-111's cavities in the early stages of the simulation; however, a remarkably greater selectivity of CO2 adsorption can be seen in the course of the simulation. Calculations were performed at ambient conditions first, and then varying temperature and pressure, obtaining some insight about the different adsorption found in each case. An evaluation of the host molecule cavities accessible volume was also performed, based on the guest that occupies the pore. Finally, a discussion between the different intermolecular host-guest interactions is presented, justifying the different selectivity obtained in the molecular simulation calculations. From the results obtained, the feasibility of a renewable separation and storage method for CO2 using these nanometric scale porous liquids is pointed out.
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3
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Comprehensive review on physical properties of supercritical carbon dioxide calculated by molecular simulation. KOREAN J CHEM ENG 2023. [DOI: 10.1007/s11814-022-1316-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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Algaba J, Acuña E, Míguez JM, Mendiboure B, Zerón IM, Blas FJ. Simulation of the carbon dioxide hydrate-water interfacial energy. J Colloid Interface Sci 2022; 623:354-367. [PMID: 35594594 DOI: 10.1016/j.jcis.2022.05.029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 05/04/2022] [Accepted: 05/05/2022] [Indexed: 10/18/2022]
Abstract
HYPOTHESIS Carbon dioxide hydrates are ice-like nonstoichiometric inclusion solid compounds with importance to global climate change, and gas transportation and storage. The thermodynamic and kinetic mechanisms that control carbon dioxide nucleation critically depend on hydrate-water interfacial free energy. Only two independent indirect experiments are available in the literature. Interfacial energies show large uncertainties due to the conditions at which experiments are performed. Under these circumstances, we hypothesize that accurate molecular models for water and carbon dioxide combined with computer simulation tools can offer an alternative but complementary way to estimate interfacial energies at coexistence conditions from a molecular perspective. CALCULATIONS We have evaluated the interfacial free energy of carbon dioxide hydrates at coexistence conditions (three-phase equilibrium or dissociation line) implementing advanced computational methodologies, including the novel Mold Integration methodology. Our calculations are based on the definition of the interfacial free energy, standard statistical thermodynamic techniques, and the use of the most reliable and used molecular models for water (TIP4P/Ice) and carbon dioxide (TraPPE) available in the literature. FINDINGS We find that simulations provide an interfacial energy value, at coexistence conditions, consistent with the experiments from its thermodynamic definition. Our calculations are reliable since are based on the use of two molecular models that accurately predict: (1) The ice-water interfacial free energy; and (2) the dissociation line of carbon dioxide hydrates. Computer simulation predictions provide alternative but reliable estimates of the carbon dioxide interfacial energy. Our pioneering work demonstrates that is possible to predict interfacial energies of hydrates from a truly computational molecular perspective and opens a new door to the determination of free energies of hydrates.
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Affiliation(s)
- Jesús Algaba
- Department of Chemical Engineering, South Kensington Campus, Imperial College London, SW7 2AZ London, United Kingdom
| | - Esteban Acuña
- Laboratorio de Simulacion Molecular y Quimica Computacional, CIQSO-Centro de Investigacion en Quimica Sostenible and Departamento de Ciencias Integradas, Universidad de Huelva, 21007 Huelva, Spain
| | - José Manuel Míguez
- Laboratorio de Simulacion Molecular y Quimica Computacional, CIQSO-Centro de Investigacion en Quimica Sostenible and Departamento de Ciencias Integradas, Universidad de Huelva, 21007 Huelva, Spain
| | - Bruno Mendiboure
- Laboratoire des Fluides Complexes et Leurs Reservoirs, UMR5150, Universite de Pau et des Pays de l'Adour, B. P. 1155, Pau Cedex 64014, France
| | - Iván M Zerón
- Laboratorio de Simulacion Molecular y Quimica Computacional, CIQSO-Centro de Investigacion en Quimica Sostenible and Departamento de Ciencias Integradas, Universidad de Huelva, 21007 Huelva, Spain
| | - Felipe J Blas
- Laboratorio de Simulacion Molecular y Quimica Computacional, CIQSO-Centro de Investigacion en Quimica Sostenible and Departamento de Ciencias Integradas, Universidad de Huelva, 21007 Huelva, Spain.
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5
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Ab initio electrical properties of CO2: polarizabilities, hyperpolarizabilities, and multipole moments. Theor Chem Acc 2021. [DOI: 10.1007/s00214-021-02797-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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6
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Tietz C, Sekulla M, Yang X, Schmid R, Richter M. Linking Fluid Densimetry and Molecular Simulation: Adsorption Behavior of Carbon Dioxide on Planar Gold Surfaces. Ind Eng Chem Res 2020. [DOI: 10.1021/acs.iecr.0c01423] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Christopher Tietz
- Applied Thermodynamics, Chemnitz University of Technology, Chemnitz 09107, Germany
| | - Markus Sekulla
- Applied Thermodynamics, Chemnitz University of Technology, Chemnitz 09107, Germany
| | - Xiaoxian Yang
- Fluid Science & Resources Division, School of Engineering, The University of Western Australia, Crawley, WA 6009, Australia
| | - Rochus Schmid
- Computational Materials Chemistry Group, Ruhr University Bochum, Bochum 44801, Germany
| | - Markus Richter
- Applied Thermodynamics, Chemnitz University of Technology, Chemnitz 09107, Germany
- Fluid Science & Resources Division, School of Engineering, The University of Western Australia, Crawley, WA 6009, Australia
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Michl J, Sega M, Dellago C. Phase stability of the ice XVII-based CO 2 chiral hydrate from molecular dynamics simulations. J Chem Phys 2019; 151:104502. [PMID: 31521081 DOI: 10.1063/1.5116540] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We computed the phase diagram of CO2 hydrates at high pressure (HP), from 0.3 to 20 kbar, by means of molecular dynamics simulations. The two CO2 hydrates known to occur in this pressure range are the cubic structure I (sI) clathrate and the HP hydrate, whose water framework is the recently discovered ice XVII. We investigated the stability of both hydrates upon heating (melting) as well as the phase changes upon compression. The CO2-filled ice XVII is found to be more stable than the sI clathrate and than the mixture of ice VI and dry ice at pressure values ranging from 6 to 18 kbar and in a wide temperature range, although a phenomenological correction suggests that the stability should more realistically range from 6.5 to 13.5 kbar. Our simulation results support the current hypothesis that the HP hydrate is stable at temperatures above the melting curve of ice VI.
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Affiliation(s)
- Jakob Michl
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090 Vienna, Austria
| | - Marcello Sega
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090 Vienna, Austria
| | - Christoph Dellago
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090 Vienna, Austria
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Van Vleet MJ, Misquitta AJ, Schmidt JR. New Angles on Standard Force Fields: Toward a General Approach for Treating Atomic-Level Anisotropy. J Chem Theory Comput 2018; 14:739-758. [DOI: 10.1021/acs.jctc.7b00851] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Mary J. Van Vleet
- Theoretical
Chemistry Institute and Department of Chemistry, University of Wisconsin−Madison, Madison, Wisconsin 53706, United States
| | - Alston J. Misquitta
- Department
of Physics and Astronomy, Queen Mary University of London, London E1 4NS, United Kingdom
| | - J. R. Schmidt
- Theoretical
Chemistry Institute and Department of Chemistry, University of Wisconsin−Madison, Madison, Wisconsin 53706, United States
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Gimondi I, Salvalaglio M. CO2 packing polymorphism under pressure: Mechanism and thermodynamics of the I-III polymorphic transition. J Chem Phys 2017; 147:114502. [DOI: 10.1063/1.4993701] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
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10
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Pérez-Rodríguez M, Vidal-Vidal A, Míguez JM, Blas FJ, Torré JP, Piñeiro MM. Computational study of the interplay between intermolecular interactions and CO 2 orientations in type I hydrates. Phys Chem Chem Phys 2017; 19:3384-3393. [PMID: 28092383 DOI: 10.1039/c6cp07097c] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Carbon dioxide (CO2) molecules show a rich orientation landscape when they are enclathrated in type I hydrates. Previous studies have described experimentally their preferential orientations, and some theoretical works have explained, but only partially, these experimental results. In the present paper, we use classical molecular dynamics and electronic density functional theory to advance in the theoretical description of CO2 orientations within type I hydrates. Our results are fully compatible with those previously reported, both theoretical and experimental, the geometric shape of the cavities in hydrate being, and therefore, the steric constraints, responsible for some (but not all) preferential angles. In addition, our calculations also show that guest-guest interactions in neighbouring cages are a key factor to explain the remaining experimental angles. Besides the implication concerning equation of state hydrate modeling approximations, the conclusion is that these guest-guest interactions should not be neglected, contrary to the usual practice.
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Affiliation(s)
- M Pérez-Rodríguez
- Dpto. de Física Aplicada, Fac. de Ciencias, Univ. de Vigo, E36310, Spain.
| | - A Vidal-Vidal
- Dpto. de Física Aplicada, Fac. de Ciencias, Univ. de Vigo, E36310, Spain.
| | - J M Míguez
- Laboratorio de Simulación Molecular y Química Computacional, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Física Aplicada, Facultad de Ciencias Experimentales, Universidad de Huelva, E21071 Huelva, Spain
| | - F J Blas
- Laboratorio de Simulación Molecular y Química Computacional, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Física Aplicada, Facultad de Ciencias Experimentales, Universidad de Huelva, E21071 Huelva, Spain
| | - J-P Torré
- UMR 5150 - Laboratoire des Fluides Complexes et leurs Réservoirs, Université de Pau et des Pays de l'Adour, B. P. 1155, Pau, Cedex 64013, France
| | - M M Piñeiro
- Dpto. de Física Aplicada, Fac. de Ciencias, Univ. de Vigo, E36310, Spain.
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Dittmar HR, Kusalik PG. Ordering effects of conjugate thermal fields in simulations of molecular liquids: Carbon dioxide and water. J Chem Phys 2016; 145:134504. [DOI: 10.1063/1.4963767] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Affiliation(s)
- Harro R. Dittmar
- Department of Chemistry, University of Calgary, Calgary, Alberta T2N 1N4, Canada
| | - Peter G. Kusalik
- Department of Chemistry, University of Calgary, Calgary, Alberta T2N 1N4, Canada
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12
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Molecular Dynamics Evaluation of Dielectric-Constant Mixing Rules for H 2O-CO 2 at Geologic Conditions. J SOLUTION CHEM 2015; 44:2179-2193. [PMID: 26664009 DOI: 10.1007/s10953-015-0401-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
Modeling of mineral reaction equilibria and aqueous-phase speciation of C-O-H fluids requires the dielectric constant of the fluid mixture, which is not known from experiment and is typically estimated by some rule for mixing pure-component values. In order to evaluate different proposed mixing rules, we use molecular dynamics simulation to calculate the dielectric constant of a model H2O-CO2 mixture at temperatures of 700 K and 1000 K at pressures up to 3 GPa. We find that theoretically based mixing rules that depend on combining the molar polarizations of the pure fluids systematically overestimate the dielectric constant of the mixture, as would be expected for mixtures of nonpolar and strongly polar components. The commonly used semiempirical mixing rule due to Looyenga works well for this system at the lower pressures studied, but somewhat underestimates the dielectric constant at higher pressures and densities, especially at the water-rich end of the composition range.
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Heit YN, Nanda KD, Beran GJO. Predicting finite-temperature properties of crystalline carbon dioxide from first principles with quantitative accuracy. Chem Sci 2015; 7:246-255. [PMID: 29861980 PMCID: PMC5952317 DOI: 10.1039/c5sc03014e] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2015] [Accepted: 09/28/2015] [Indexed: 11/21/2022] Open
Abstract
The temperature-dependence of the crystalline carbon dioxide (phase I) structure, thermodynamics, and mechanical properties are predicted in excellent agreement with experiment over a 200 K temperature range using high-level electronic structure calculations.
Molecular crystal structures, thermodynamics, and mechanical properties can vary substantially with temperature, and predicting these temperature-dependencies correctly is important for many practical applications in the pharmaceutical industry and other fields. However, most electronic structure predictions of molecular crystal properties neglect temperature and/or thermal expansion, leading to potentially erroneous results. Here, we demonstrate that by combining large basis set second-order Møller–Plesset (MP2) or even coupled cluster singles, doubles, and perturbative triples (CCSD(T)) electronic structure calculations with a quasiharmonic treatment of thermal expansion, experimentally observable properties such as the unit cell volume, heat capacity, enthalpy, entropy, sublimation point and bulk modulus of phase I crystalline carbon dioxide can be predicted in excellent agreement with experiment over a broad range of temperatures. These results point toward a promising future for ab initio prediction of molecular crystal properties at real-world temperatures and pressures.
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Affiliation(s)
- Yonaton N Heit
- Department of Chemistry , University of California , Riverside , California 92521 , USA . ; Tel: +1-951-827-7869
| | - Kaushik D Nanda
- Department of Chemistry , University of California , Riverside , California 92521 , USA . ; Tel: +1-951-827-7869
| | - Gregory J O Beran
- Department of Chemistry , University of California , Riverside , California 92521 , USA . ; Tel: +1-951-827-7869
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Shah MS, Tsapatsis M, Siepmann JI. Development of the Transferable Potentials for Phase Equilibria Model for Hydrogen Sulfide. J Phys Chem B 2015; 119:7041-52. [DOI: 10.1021/acs.jpcb.5b02536] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Mansi S. Shah
- Department
of Chemical Engineering and Materials Science, University of Minnesota, 421 Washington Avenue SE, Minneapolis, Minnesota 55455-0132, United States
| | - Michael Tsapatsis
- Department
of Chemical Engineering and Materials Science, University of Minnesota, 421 Washington Avenue SE, Minneapolis, Minnesota 55455-0132, United States
| | - J. Ilja Siepmann
- Department
of Chemical Engineering and Materials Science, University of Minnesota, 421 Washington Avenue SE, Minneapolis, Minnesota 55455-0132, United States
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15
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Míguez JM, Conde MM, Torré JP, Blas FJ, Piñeiro MM, Vega C. Molecular dynamics simulation of CO2hydrates: Prediction of three phase coexistence line. J Chem Phys 2015; 142:124505. [DOI: 10.1063/1.4916119] [Citation(s) in RCA: 65] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- J. M. Míguez
- Laboratoire des Fluides Complexes et leurs Réservoirs, UMR 5150, Université de Pau et des Pays de l’Adour, B. P. 1155, Pau-Cedex 64013, France
| | - M. M. Conde
- Laboratoire des Fluides Complexes et leurs Réservoirs, UMR 5150, Université de Pau et des Pays de l’Adour, B. P. 1155, Pau-Cedex 64013, France
| | - J.-P. Torré
- Laboratoire des Fluides Complexes et leurs Réservoirs, UMR 5150, Université de Pau et des Pays de l’Adour, B. P. 1155, Pau-Cedex 64013, France
| | - F. J. Blas
- Departamento de Física Aplicada, Facultad de Ciencias Experimentales, and Centro de Física Teórica y Matemática FIMAT, Universidad de Huelva, 21071 Huelva, Spain
| | - M. M. Piñeiro
- Departamento de Física Aplicada, Facultade de Ciencias, Universidade de Vigo, E36310 Vigo, Spain
| | - C. Vega
- Departamento de Química-Física I, Facultad de Ciencias Químicas, Universidad Complutense de Madrid, E28040 Madrid, Spain
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17
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Vidal-Vidal Á, Pérez-Rodríguez M, Torré JP, Piñeiro MM. DFT calculation of the potential energy landscape topology and Raman spectra of type I CH4and CO2hydrates. Phys Chem Chem Phys 2015; 17:6963-75. [DOI: 10.1039/c4cp04962d] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Type I methane and carbon dioxide hydrates analyzed using DFT calculations: Raman spectra and potential energy landscape.
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Affiliation(s)
| | | | - Jean-Philippe Torré
- UMR 5150 Laboratoire des Fluides Complexes et leurs Réservoirs
- Université de Pau et des Pays de l'Adour
- Pau Cedex 64013
- France
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18
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Aimoli CG, Maginn EJ, Abreu CRA. Transport properties of carbon dioxide and methane from molecular dynamics simulations. J Chem Phys 2014; 141:134101. [DOI: 10.1063/1.4896538] [Citation(s) in RCA: 73] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Affiliation(s)
- C. G. Aimoli
- Santos Basin Exploration and Production Operations Unit, Petróleo Brasileiro S.A., Av. Conselheiro Nébias 175, Santos, SP 11015-001, Brazil
- School of Chemical Engineering, State University of Campinas, Av. Albert Einstein 500, Campinas, SP 13083-852, Brazil
- Department of Chemical and Biomolecular Engineering, University of Notre Dame, 182 Fitzpatrick Hall, Notre Dame, Indiana 46556, USA
| | - E. J. Maginn
- Department of Chemical and Biomolecular Engineering, University of Notre Dame, 182 Fitzpatrick Hall, Notre Dame, Indiana 46556, USA
| | - C. R. A. Abreu
- School of Chemical Engineering, State University of Campinas, Av. Albert Einstein 500, Campinas, SP 13083-852, Brazil
- School of Chemistry, Federal University of Rio de Janeiro, Av. Athos da Silveira Ramos 149, Rio de Janeiro, RJ 21941-909, Brazil
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