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Hardt E, Chavarin CA, Gruessing S, Flesch J, Skibitzki O, Spirito D, Vita GM, Simone GD, Masi AD, You C, Witzigmann B, Piehler J, Capellini G. Quantitative protein sensing with germanium THz-antennas manufactured using CMOS processes. OPTICS EXPRESS 2022; 30:40265-40276. [PMID: 36298962 DOI: 10.1364/oe.469496] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Accepted: 08/30/2022] [Indexed: 06/16/2023]
Abstract
The development of a CMOS manufactured THz sensing platform could enable the integration of state-of-the-art sensing principles with the mixed signal electronics ecosystem in small footprint, low-cost devices. To this aim, in this work we demonstrate a label-free protein sensing platform using highly doped germanium plasmonic antennas realized on Si and SOI substrates and operating in the THz range of the electromagnetic spectrum. The antenna response to different concentrations of BSA shows in both cases a linear response with saturation above 20 mg/mL. Ge antennas on SOI substrates feature a two-fold sensitivity as compared to conventional Si substrates, reaching a value of 6 GHz/(mg/mL), which is four-fold what reported using metal-based metamaterials. We believe that this result could pave the way to a low-cost lab-on-a-chip biosensing platform.
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Kasar S, Underbayev C, Hassan M, Ilev I, Degheidy H, Bauer S, Marti G, Lutz C, Raveche E, Batish M. Alterations in the mir-15a/16-1 Loci Impairs Its Processing and Augments B-1 Expansion in De Novo Mouse Model of Chronic Lymphocytic Leukemia (CLL). PLoS One 2016; 11:e0149331. [PMID: 26959643 PMCID: PMC4784815 DOI: 10.1371/journal.pone.0149331] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2015] [Accepted: 01/29/2016] [Indexed: 12/26/2022] Open
Abstract
New Zealand Black (NZB) mice, a de novo model of CLL, share multiple characteristics with CLL patients, including decreased expression of miR-15a/16-1. We previously discovered a point mutation and deletion in the 3' flanking region of mir-16-1 of NZB and a similar mutation has been found in a small number of CLL patients. However, it was unknown whether the mutation is the cause for the reduced miR-15a/16-1 expression and CLL development. Using PCR and in vitro microRNA processing assays, we found that the NZB sequence alterations in the mir-15a/16-1 loci result in deficient processing of the precursor forms of miR-15a/16-1, in particular, we observe impaired conversion of pri-miR-15a/16-1 to pre-miR-15a/16-1. The in vitro data was further supported by derivation of congenic strains with replaced mir-15a/16-1 loci at one or both alleles: NZB congenic mice (NmiR+/-) and DBA congenic mice (DmiR-/-). The level of miR-15a/16-1 reflected the configuration of the mir-15a/16-1 loci with DBA congenic mice (DmiR-/-) showing reduced miR-15a levels compared to homozygous wild-type allele, while the NZB congenic mice (NmiR+/-) showed an increase in miR-15a levels relative to homozygous mutant allele. Similar to Monoclonal B-cell Lymphocytosis (MBL), the precursor stage of the human disease, an overall expansion of the B-1 population was observed in DBA congenic mice (DmiR-/-) relative to wild-type (DmiR+/+). These studies support our hypothesis that the mutations in the mir-15a/16-1 loci are responsible for decreased expression of this regulatory microRNA leading to B-1 expansion and CLL development.
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Affiliation(s)
- Siddha Kasar
- New Jersey Medical School, Rutgers University, Newark, New Jersey, 07103, United States of America
| | - Chingiz Underbayev
- New Jersey Medical School, Rutgers University, Newark, New Jersey, 07103, United States of America
| | | | - Ilko Ilev
- OSEL/CDRH/FDA White Oak, Maryland, United States of America
| | - Heba Degheidy
- CBER/FDA White Oak, Maryland, United States of America
| | - Steven Bauer
- CBER/FDA White Oak, Maryland, United States of America
| | - Gerald Marti
- OSEL/CDRH/FDA White Oak, Maryland, United States of America
| | - Carol Lutz
- New Jersey Medical School, Rutgers University, Newark, New Jersey, 07103, United States of America
| | - Elizabeth Raveche
- New Jersey Medical School, Rutgers University, Newark, New Jersey, 07103, United States of America
| | - Mona Batish
- New Jersey Medical School, Rutgers University, Newark, New Jersey, 07103, United States of America
- * E-mail:
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Hassan M, Ilev I. Grazing incidence angle based sensing approach integrated with fiber-optic Fourier transform infrared (FO-FTIR) spectroscopy for remote and label-free detection of medical device contaminations. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2014; 85:103108. [PMID: 25362372 DOI: 10.1063/1.4897247] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Contamination of medical devices has become a critical and prevalent public health safety concern since medical devices are being increasingly used in clinical practices for diagnostics, therapeutics and medical implants. The development of effective sensing methods for real-time detection of pathogenic contamination is needed to prevent and reduce the spread of infections to patients and the healthcare community. In this study, a hollow-core fiber-optic Fourier transform infrared spectroscopy methodology employing a grazing incidence angle based sensing approach (FO-FTIR-GIA) was developed for detection of various biochemical contaminants on medical device surfaces. We demonstrated the sensitivity of FO-FTIR-GIA sensing approach for non-contact and label-free detection of contaminants such as lipopolysaccharide from various surface materials relevant to medical device. The proposed sensing system can detect at a minimum loading concentration of approximately 0.7 μg/cm(2). The FO-FTIR-GIA has the potential for the detection of unwanted pathogen in real time.
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Affiliation(s)
- Moinuddin Hassan
- Optical Therapeutics and Medical Nanophotonics Laboratory, Division of Biomedical Physics, Office of Science and Engineering Laboratories, Center for Devices and Radiological Health, U.S. Food and Drug Administration, Silver Spring, Maryland 20993, USA
| | - Ilko Ilev
- Optical Therapeutics and Medical Nanophotonics Laboratory, Division of Biomedical Physics, Office of Science and Engineering Laboratories, Center for Devices and Radiological Health, U.S. Food and Drug Administration, Silver Spring, Maryland 20993, USA
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Muscle sensor model using small scale optical device for pattern recognitions. ScientificWorldJournal 2013; 2013:346047. [PMID: 24222730 PMCID: PMC3810185 DOI: 10.1155/2013/346047] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2013] [Accepted: 09/18/2013] [Indexed: 11/17/2022] Open
Abstract
A new sensor system for measuring contraction and relaxation of muscles by using a PANDA ring resonator is proposed. The small scale optical device is designed and configured to perform the coupling effects between the changes in optical device phase shift and human facial muscle movement, which can be used to form the relationship between optical phase shift and muscle movement. By using the Optiwave and MATLAB programs, the results obtained have shown that the measurement of the contraction and relaxation of muscles can be obtained after the muscle movements, in which the unique pattern of individual muscle movement from facial expression can be established. The obtained simulation results, that is, interference signal patterns, can be used to form the various pattern recognitions, which are useful for the human machine interface and the human computer interface application and discussed in detail.
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