1
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Xu X, Liu S, Chen J, Zhang DH. High vibrational excitation of the reagent transforms the late-barrier H + HOD reaction into an early-barrier reaction. J Chem Phys 2024; 160:041101. [PMID: 38265082 DOI: 10.1063/5.0187094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Accepted: 01/02/2024] [Indexed: 01/25/2024] Open
Abstract
Polanyi's rules predict that a late-barrier reaction yields vibrationally cold products; however, experimental studies showed that the H2 product from the late-barrier H + H2O(|04⟩-) and H + HOD(vOH = 4) reactions is vibrationally hot. Here, we report a potential-averaged five-dimensional state-to-state quantum dynamics study for the H + HOD(vOH = 0-4) → H2 + OD reactions on a highly accurate potential energy surface with the total angular momentum J = 0. It is found that with the HOD vibration excitation increasing from vOH = 1 to 4, the product H2 becomes increasingly vibrationally excited and manifests a typical characteristic of an early barrier reaction for vOH = 3 to 4. Analysis of the scattering wave functions revealed that vibrational excitation in the breaking OH bond moves the location of dynamical saddle point from product side to reactant side, transforming the reaction into an early barrier reaction. Interestingly, pronounced oscillatory structures in the total and product vibrational-state-resolved reaction probabilities were observed for the H + HOD(vOH = 3, 4) reactions, in particular at low collision energies, which originate from the Feshbach resonance states trapped in the bending/torsion excited vibrational adiabatic potential wells in the entrance region due to van der Waals interactions.
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Affiliation(s)
- Xin Xu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, Liaoning 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Shu Liu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, Liaoning 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jun Chen
- State Key Laboratory of Structure Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou, Fujian 350002, China
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, Liaoning 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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2
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Voute A, Gatti F, Møller KB, Henriksen NE. Femtochemistry of bimolecular reactions from weakly bound complexes: computational study of the H + H'OD → H'OH + D or HOD + H' exchange reactions. Phys Chem Chem Phys 2021; 23:27207-27226. [PMID: 34850799 DOI: 10.1039/d1cp04391a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A full-dimensional wavepacket propagation describing the bimolecular exchange reactions H + H'OD → H'OH + D or HOD + H' initiated by photolysis of HCl in the hydrogen-bound complex (HCl)⋯(HOD) is reported. The dynamics of this reaction is carried out with the MCTDH method on an ab initio potential energy surface (PES) of H3O and the initial state is derived from the ground state wavefunction of the complex obtained by relaxation on its own electronic ground state ab initio PES. The description of the system makes use of polyspherical coordinates parametrizing a set of Radau and Jacobi vectors. The calculated energy- and time-resolved reaction probabilities show, owing to the large collision energies at play stemming from the (almost full) photolysis of HCl, that the repulsion between oxygen in the H'OD molecule and the incoming hydrogen atom is the main feature of the collision and leads to non-reactive scattering. No abstraction reaction products are observed. However, both exchange processes are still observable, with a preference in O-H' bond dissociation over that of O-D. The selectivity is reversed upon vibrational pre-excitation of the O-D stretching mode in the H'OD molecule. It is shown that, after the collision, the hydrogen atom of HCl does most likely not encounter the almost stationary chlorine atom again but we also consider the limit case where the H atom is forced to collide multiple times against H'OD as a result of being pushed back by the Cl atom.
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Affiliation(s)
- Alexandre Voute
- Department of Chemistry, Technical University of Denmark, Kemitorvet 206, 2800 Kongens Lyngby, Denmark.
| | - Fabien Gatti
- ISMO, Institut des Sciences Moléculaires d'Orsay - UMR 8214 CNRS/Université Paris-Saclay, F-91405 Orsay, France
| | - Klaus B Møller
- Department of Chemistry, Technical University of Denmark, Kemitorvet 206, 2800 Kongens Lyngby, Denmark.
| | - Niels E Henriksen
- Department of Chemistry, Technical University of Denmark, Kemitorvet 206, 2800 Kongens Lyngby, Denmark.
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3
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Sathyamurthy N, Mahapatra S. Time-dependent quantum mechanical wave packet dynamics. Phys Chem Chem Phys 2020; 23:7586-7614. [PMID: 33306771 DOI: 10.1039/d0cp03929b] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Starting from a model study of the collinear (H, H2) exchange reaction in 1959, the time-dependent quantum mechanical wave packet (TDQMWP) method has come a long way in dealing with systems as large as Cl + CH4. The fast Fourier transform method for evaluating the second order spatial derivative of the wave function and split-operator method or Chebyshev polynomial expansion for determining the time evolution of the wave function for the system have made the approach highly accurate from a practical point of view. The TDQMWP methodology has been able to predict state-to-state differential and integral reaction cross sections accurately, in agreement with available experimental results for three dimensional (H, H2) collisions, and identify reactive scattering resonances too. It has become a practical computational tool in predicting the observables for many A + BC exchange reactions in three dimensions and a number of larger systems. It is equally amenable to determining the bound and quasi-bound states for a variety of molecular systems. Just as it is able to deal with dissociative processes (without involving basis set expansion), it is able to deal with multi-mode nonadiabatic dynamics in multiple electronic states with equal ease. We present an overview of the method and its strength and limitations, citing examples largely from our own research groups.
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4
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5
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Lu X, Wang X, Fu B, Zhang D. Theoretical Investigations of Rate Coefficients of H + H2O2 → OH + H2O on a Full-Dimensional Potential Energy Surface. J Phys Chem A 2019; 123:3969-3976. [DOI: 10.1021/acs.jpca.9b02526] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Xiaoxiao Lu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Zhongshan Road 457, Dalian 116023, China
- Department of Chemical Physics, University of Science and Technology of China, Jinzhai Road 96, Hefei 230026, China
| | - Xingan Wang
- Department of Chemical Physics, University of Science and Technology of China, Jinzhai Road 96, Hefei 230026, China
| | - Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Zhongshan Road 457, Dalian 116023, China
| | - Donghui Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Zhongshan Road 457, Dalian 116023, China
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6
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Zheng R, Zhu Y, Song H. Mode-specific quantum dynamics and kinetics of the hydrogen abstraction reaction OH + H2O → H2O + OH. Phys Chem Chem Phys 2019; 21:24054-24060. [DOI: 10.1039/c9cp04721b] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The synergistic effect between the reactant stretching and bending modes on promoting the reaction.
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Affiliation(s)
- Rui Zheng
- School of Physics and Electronics
- North China University of Water Resources and Electric Power
- Zhengzhou 450011
- China
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
| | - Yongfa Zhu
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
- Wuhan Institute of Physics and Mathematics
- Chinese Academy of Sciences
- Wuhan 430071
- China
| | - Hongwei Song
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
- Wuhan Institute of Physics and Mathematics
- Chinese Academy of Sciences
- Wuhan 430071
- China
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7
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Xu X, Chen J, Liu S, Zhang DH. An ab initio
-based global potential energy surface for the SH3
system and full-dimensional state-to-state quantum dynamics study for the H2
+ HS → H2
S + H reaction. J Comput Chem 2018; 40:1151-1160. [DOI: 10.1002/jcc.25746] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2018] [Revised: 10/11/2018] [Accepted: 10/12/2018] [Indexed: 11/05/2022]
Affiliation(s)
- Xin Xu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics; Chinese Academy of Sciences; Dalian 116023 China
| | - Jun Chen
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM); College of Chemistry and Chemical Engineering, Xiamen University; Xiamen 361005 China
| | - Shu Liu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics; Chinese Academy of Sciences; Dalian 116023 China
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics; Chinese Academy of Sciences; Dalian 116023 China
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8
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Lu X, Meng Q, Wang X, Fu B, Zhang DH. Rate coefficients of the H + H2O2→ H2+ HO2reaction on an accurate fundamental invariant-neural network potential energy surface. J Chem Phys 2018; 149:174303. [PMID: 30409010 DOI: 10.1063/1.5063613] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Xiaoxiao Lu
- Department of Chemical Physics, University of Science and Technology of China, Jinzhai Road 96, Hefei 230026, China
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Zhongshan Road 457, Dalian 116023, China
| | - Qingyong Meng
- Department of Applied Chemistry, Northwestern Polytechnical University, Youyi West Road 127, Xi’an 710072, China
| | - Xingan Wang
- Department of Chemical Physics, University of Science and Technology of China, Jinzhai Road 96, Hefei 230026, China
| | - Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Zhongshan Road 457, Dalian 116023, China
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Zhongshan Road 457, Dalian 116023, China
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9
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Zheng R, Zhu Y, Song H. Mode specific dynamics in bond selective reaction O′(3P) + HOD → O′H + OD/O′D + OH. J Chem Phys 2018; 149:054304. [DOI: 10.1063/1.5037492] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Rui Zheng
- School of Mathematics and Statistics, North China University of Water Resources and Electric Power, Zhengzhou 450011, China
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Yongfa Zhu
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hongwei Song
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
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10
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Song H, Yang M. Understanding mode-specific dynamics in the local mode representation. Phys Chem Chem Phys 2018; 20:19647-19655. [PMID: 30014087 DOI: 10.1039/c8cp03240h] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Mode specificity is a main characteristic of transition state control of reaction dynamics. The normal mode representation has been widely employed to describe the mode specificity in elementary chemical reactions. However, spectroscopists have demonstrated that the local mode representation has advantages in analyzing the overtone and combination band spectra. In this work, the mode-specific reaction dynamics between the hydrogen atom and the molecules H2S and H2O is studied using a full-dimensional quantum scattering model in the (2 + 1) Radau-Jacobi coordinates. The mode specificities in the reactions that violates our physical intuition in the normal mode representation are well rationalized in the local mode representation. The energy flow between different XH bonds resulting from the intramolecular interaction and/or intermolecular interaction is unveiled, together with its impacts on dynamics of the abstraction and exchange reactions.
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Affiliation(s)
- Hongwei Song
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China.
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11
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Fu B, Zhang DH. Ab Initio Potential Energy Surfaces and Quantum Dynamics for Polyatomic Bimolecular Reactions. J Chem Theory Comput 2018; 14:2289-2303. [DOI: 10.1021/acs.jctc.8b00006] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
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12
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Zhao B, Manthe U, Guo H. Fermi resonance controlled product branching in the H + HOD reaction. Phys Chem Chem Phys 2018; 20:17029-17037. [DOI: 10.1039/c8cp02279h] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Excitation of the first overtone of bending mode results in a significant enhancement in the HD + OH channel due to the 1 : 2 Fermi resonance between the fundamental OD stretch and the first overtone of the bend.
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Affiliation(s)
- Bin Zhao
- Theoretische Chemie
- Fakultät für Chemie
- Universität Bielefeld
- D-33615 Bielefeld
- Germany
| | - Uwe Manthe
- Theoretische Chemie
- Fakultät für Chemie
- Universität Bielefeld
- D-33615 Bielefeld
- Germany
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
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13
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Zhao B, Sun Z, Guo H. State-to-state mode specificity in H + DOH(νOH = 1) → HD + OH(ν2 = 0) reaction: vibrational non-adiabaticity or local-mode excitation? Phys Chem Chem Phys 2018; 20:191-198. [DOI: 10.1039/c7cp07199j] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
State-of-the-art full dimensional state-to-state quantum dynamics reveal a startling observation in which the DOH(νOH = 1) molecule reacts with a H atom to produce a vibrationless OH product. This interesting observation is attributed to a small OD excited local-mode component in the reactant wavefunction.
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Affiliation(s)
- Bin Zhao
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
| | - Zhigang Sun
- Center for Theoretical and Computational Chemistry
- and State Key Laboratory of Molecular Reaction Dynamics
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
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14
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Qi J, Lu D, Song H, Li J, Yang M. Quantum and quasiclassical dynamics of the multi-channel H + H2S reaction. J Chem Phys 2017; 146:124303. [DOI: 10.1063/1.4978685] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Ji Qi
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Dandan Lu
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Hongwei Song
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Minghui Yang
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
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15
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Zhao ZQ, Liu S, Zhang DH. Differential Cross Sections for the H+D2O→HD+OD Reaction: a Full Dimensional State-to-State Quantum Dynamics Study. CHINESE J CHEM PHYS 2017. [DOI: 10.1063/1674-0068/30/cjcp1608163] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Zhi-qiang Zhao
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Shu Liu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
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16
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Zhao B, Guo H. State‐to‐state quantum reactive scattering in four‐atom systems. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2017. [DOI: 10.1002/wcms.1301] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Bin Zhao
- Department of Chemistry and Chemical Biology University of New Mexico Albuquerque NM USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology University of New Mexico Albuquerque NM USA
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17
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Fu B, Shan X, Zhang DH, Clary DC. Recent advances in quantum scattering calculations on polyatomic bimolecular reactions. Chem Soc Rev 2017; 46:7625-7649. [DOI: 10.1039/c7cs00526a] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This review surveys quantum scattering calculations on chemical reactions of polyatomic molecules in the gas phase published in the last ten years.
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Affiliation(s)
- Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- China
| | - Xiao Shan
- Physical and Theoretical Chemistry Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- China
| | - David C. Clary
- Physical and Theoretical Chemistry Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
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18
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Song H, Yang M, Guo H. Communication: Equivalence between symmetric and antisymmetric stretching modes of NH3 in promoting H + NH3 → H2 + NH2 reaction. J Chem Phys 2016; 145:131101. [DOI: 10.1063/1.4963286] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Hongwei Song
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Minghui Yang
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
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19
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Zhao Z, Liu S, Zhang DH. State-to-state differential cross sections for a four-atom reaction: H2+ OH → H2O + H in full dimensions. J Chem Phys 2016; 145:134301. [DOI: 10.1063/1.4963798] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Zhiqiang Zhao
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People’s Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People’s Republic of China
| | - Shu Liu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People’s Republic of China
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People’s Republic of China
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20
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Guo H, Liu K. Control of chemical reactivity by transition-state and beyond. Chem Sci 2016; 7:3992-4003. [PMID: 30155041 PMCID: PMC6013787 DOI: 10.1039/c6sc01066k] [Citation(s) in RCA: 68] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2016] [Accepted: 04/06/2016] [Indexed: 11/21/2022] Open
Abstract
It has been long established that the transition state for an activated reaction controls the overall reactivity, serving as the bottleneck for reaction flux. However, the role of the transition state in regulating quantum state resolved reactivity has only been addressed more recently, thanks to advances in both experimental and theoretical techniques. In this perspective, we discuss some recent advances in understanding mode-specific reaction dynamics in bimolecular reactions, mainly focusing on the X + H2O/CH4 (X = H, F, Cl, and O(3P)) systems, extensively studied in our groups. These advances shed valuable light on the importance of the transition state in mode-specific and steric dynamics of these prototypical reactions. It is shown that many mode-specific phenomena can be understood in terms of a transition-state based model, which assumes in the sudden limit that the ability of a reactant mode for promoting the reaction stems from its coupling with the reaction coordinate at the transition state. Yet, in some cases the long-range anisotropic interactions in the entrance (or exit) valley, which govern how the trajectories reach (or leave) the transition state, also come into play, thus modifying the reactive outcomes.
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Affiliation(s)
- Hua Guo
- Department of Chemistry and Chemical Biology , University of New Mexico , Albuquerque , New Mexico 87131 , USA .
| | - Kopin Liu
- Institute of Atomic and Molecular Sciences , Academia Sinica , Taipei 10617 , Taiwan .
- Department of Physics , National Taiwan University , Taipei 10617 , Taiwan
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21
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Zhao B, Sun Z, Guo H. State-to-state mode selectivity in the HD + OH reaction: Perspectives from two product channels. J Chem Phys 2016; 144:214303. [DOI: 10.1063/1.4952764] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Bin Zhao
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Zhigang Sun
- Center for Theoretical and Computational Chemistry and State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
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22
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Zhao B, Sun Z, Guo H. A reactant-coordinate-based wave packet method for full-dimensional state-to-state quantum dynamics of tetra-atomic reactions: Application to both the abstraction and exchange channels in the H + H2O reaction. J Chem Phys 2016; 144:064104. [DOI: 10.1063/1.4941671] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Bin Zhao
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Zhigang Sun
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
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23
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Liu T, Zhang Z, Fu B, Yang X, Zhang DH. Mode specificity for the dissociative chemisorption of H2O on Cu(111): a quantum dynamics study on an accurately fitted potential energy surface. Phys Chem Chem Phys 2016; 18:8537-44. [DOI: 10.1039/c6cp00034g] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
The mode-specific dynamics for the dissociative chemisorption of H2O on Cu(111) is first investigated by seven-dimensional quantum dynamics calculations, based on an accurately fitted potential energy surface (PES) recently developed by neural network fitting to DFT energy points.
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Affiliation(s)
- Tianhui Liu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Zhaojun Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Xueming Yang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
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24
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Jiang B, Yang M, Xie D, Guo H. Quantum dynamics of polyatomic dissociative chemisorption on transition metal surfaces: mode specificity and bond selectivity. Chem Soc Rev 2016; 45:3621-40. [DOI: 10.1039/c5cs00360a] [Citation(s) in RCA: 122] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Recent advances in quantum dynamical characterization of polyatomic dissociative chemisorption on accurate global potential energy surfaces are critically reviewed.
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Affiliation(s)
- Bin Jiang
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
- Department of Chemical Physics
| | - Minghui Yang
- Key Laboratory of Magnetic Resonance in Biological Systems
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
- Wuhan Centre for Magnetic Resonance
- Wuhan Institute of Physics and Mathematics
- Chinese Academy of Sciences
| | - Daiqian Xie
- Institute of Theoretical and Computational Chemistry
- Key Laboratory of Mesoscopic Chemistry
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing 210093
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
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25
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Zhao B, Sun Z, Guo H. State-to-State Mode Specificity: Energy Sequestration and Flow Gated by Transition State. J Am Chem Soc 2015; 137:15964-70. [DOI: 10.1021/jacs.5b11404] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Bin Zhao
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Zhigang Sun
- State
Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical
and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Hua Guo
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
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26
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Liu S, Zhang DH. A local mode picture for H atom reaction with vibrationally excited H 2O: a full dimensional state-to-state quantum dynamics investigation. Chem Sci 2015; 7:261-265. [PMID: 28758003 PMCID: PMC5515045 DOI: 10.1039/c5sc03472h] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2015] [Accepted: 09/28/2015] [Indexed: 11/21/2022] Open
Abstract
A local mode picture was postulated some time ago to explain the negligible OD product excitation from H reacting with D2O in fundamental asymmetrical excitation: the D2O asymmetric stretch state is best thought as a linear combination of local mode stretches with the H atom reacting preferentially with the excited OD bond, but has never been verified. Here we report the first full-dimensional state-to-state study for the title reaction with H2O in the ground and the first symmetric and asymmetric stretching excited states. It is found that symmetric and asymmetric stretching excited states, which vibrate in very different ways in the normal mode picture, behave essentially identically in the reaction. More importantly, our calculations revealed that the reaction produces a small fraction of OH in the v = 1 state, with the population close to the relative reactivity between the ground and vibrationally excited states, and therefore it confirms the local mode picture for H2O in symmetric or asymmetric stretch states when reacting with an H atom.
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Affiliation(s)
- Shu Liu
- State Key Laboratory of Molecular Reaction Dynamics , Dalian Institute of Chemical Physics , Chinese Academy of Sciences , Dalian 116023 , Liaoning , China .
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics , Dalian Institute of Chemical Physics , Chinese Academy of Sciences , Dalian 116023 , Liaoning , China .
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27
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Song H, Guo H. Vibrational and Rotational Mode Specificity in The Cl + H2O → HCl + OH Reaction: A Quantum Dynamical Study. J Phys Chem A 2015; 119:6188-94. [DOI: 10.1021/acs.jpca.5b03740] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Hongwei Song
- Department of Chemistry
and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hua Guo
- Department of Chemistry
and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
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28
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Li J, Jiang B, Song H, Ma J, Zhao B, Dawes R, Guo H. From ab Initio Potential Energy Surfaces to State-Resolved Reactivities: X + H2O ↔ HX + OH [X = F, Cl, and O(3P)] Reactions. J Phys Chem A 2015; 119:4667-87. [DOI: 10.1021/acs.jpca.5b02510] [Citation(s) in RCA: 85] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jun Li
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
- School of Chemistry
and Chemical Engineering, Chongqing University, Chongqing 400044, China
| | - Bin Jiang
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hongwei Song
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Jianyi Ma
- Institute of Atomic
and Molecular Physics, Sichuan University, Chengdu, Sichuan 610065, China
| | - Bin Zhao
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Richard Dawes
- Department
of Chemistry, Missouri University of Science and Technology, Rolla, Missouri 65409, United States
| | - Hua Guo
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
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29
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Li J, Corchado JC, Espinosa-Garcia J, Guo H. Final state-resolved mode specificity in HX + OH → X + H2O (X = F and Cl) reactions: A quasi-classical trajectory study. J Chem Phys 2015; 142:084314. [DOI: 10.1063/1.4913522] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 400030, China
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Jose C. Corchado
- Departamento de Quimica Fisica, Universidad de Extremadura, Badajoz 06071, Spain
| | | | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
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30
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Fu B, Zhang DH. A full-dimensional quantum dynamics study of the mode specificity in the H + HOD abstraction reaction. J Chem Phys 2015; 142:064314. [DOI: 10.1063/1.4907918] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People’s Republic of China
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People’s Republic of China
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31
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Guo H, Jiang B. The sudden vector projection model for reactivity: mode specificity and bond selectivity made simple. Acc Chem Res 2014; 47:3679-85. [PMID: 25393632 DOI: 10.1021/ar500350f] [Citation(s) in RCA: 173] [Impact Index Per Article: 17.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
CONSPECTUS: Mode specificity is defined by the differences in reactivity due to excitations in various reactant modes, while bond selectivity refers to selective bond breaking in a reaction. These phenomena not only shed light on reaction dynamics but also open the door for laser control of reactions. The existence of mode specificity and bond selectivity in a reaction indicates that not all forms of energy are equivalent in promoting the reactivity, thus defying a statistical treatment. They also allow the enhancement of reactivity and control product branching ratio. As a result, they are of central importance in chemistry. This Account discusses recent advances in our understanding of these nonstatistical phenomena. In particular, the newly proposed sudden vector projection (SVP) model and its applications are reviewed. The SVP model is based on the premise that the collision in many direct reactions is much faster than intramolecular vibrational energy redistribution in the reactants. In such a sudden limit, the coupling of a reactant mode with the reaction coordinate at the transition state, which dictates its ability to promote the reaction, is approximately quantified by the projection of the former onto the latter. The SVP model can be considered as a generalization of the venerable Polanyi's rules, which are based on the location of the barrier. The SVP model is instead based on properties of the saddle point and as a result capable of treating the translational, rotational, and multiple vibrational modes in reactions involving polyatomic reactants. In case of surface reactions, the involvement of surface atoms can also be examined. Taking advantage of microscopic reversibility, the SVP model has also been used to predict product energy disposal in reactions. This simple yet powerful rule of thumb has been successfully demonstrated in many reactions including uni- and bimolecular reactions in the gas phase and gas-surface reactions. The success of the SVP model underscores the importance of the transition state in controlling mode-specific and bond-selective chemistry.
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Affiliation(s)
- Hua Guo
- Department
of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Bin Jiang
- Department
of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
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32
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Liu R, Wang F, Jiang B, Czakó G, Yang M, Liu K, Guo H. Rotational mode specificity in the Cl + CHD3 → HCl + CD3 reaction. J Chem Phys 2014; 141:074310. [DOI: 10.1063/1.4892598] [Citation(s) in RCA: 72] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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33
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Li J, Guo H. A nine-dimensional global potential energy surface for NH4(X2A1) and kinetics studies on the H + NH3 ↔ H2 + NH2 reaction. Phys Chem Chem Phys 2014; 16:6753-63. [DOI: 10.1039/c4cp00241e] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A nine-dimensional global potential energy surface (PES) for the NH4 system is developed from ∼105 high-level ab initio points and the hydrogen abstraction kinetics on the PES agree with experiment.
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Affiliation(s)
- Jun Li
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque, USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque, USA
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34
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Wang QD, Wang XJ, Kang GJ. An application of the reaction class transition state theory to the kinetics of hydrogen abstraction reactions of hydrogen with methyl esters at the methoxy group. COMPUT THEOR CHEM 2014. [DOI: 10.1016/j.comptc.2013.11.009] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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35
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Jiang B, Guo H. Competition between abstraction and exchange channels in H + HCN reaction: Full-dimensional quantum dynamics. J Chem Phys 2013; 139:224310. [DOI: 10.1063/1.4840475] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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36
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Li J, Jiang B, Guo H. Permutation invariant polynomial neural network approach to fitting potential energy surfaces. II. Four-atom systems. J Chem Phys 2013; 139:204103. [DOI: 10.1063/1.4832697] [Citation(s) in RCA: 237] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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37
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Dagdigian PJ, Alexander MH. Exact quantum scattering calculations of transport properties for the H2O–H system. J Chem Phys 2013; 139:194309. [DOI: 10.1063/1.4829681] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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38
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Jiang B, Guo H. Control of Mode/Bond Selectivity and Product Energy Disposal by the Transition State: X + H2O (X = H, F, O(3P), and Cl) Reactions. J Am Chem Soc 2013; 135:15251-6. [DOI: 10.1021/ja408422y] [Citation(s) in RCA: 115] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bin Jiang
- Department of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hua Guo
- Department of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
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39
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Jiang B, Liu R, Li J, Xie D, Yang M, Guo H. Mode selectivity in methane dissociative chemisorption on Ni(111). Chem Sci 2013. [DOI: 10.1039/c3sc51040a] [Citation(s) in RCA: 111] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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