In what time scale proton transfer takes place in a live CHO cell?

Anomalous proton transfer of a photoacid HPTS in nonaqueous reverse micelles

The proton transfer reaction is one of the fundamental chemical reactions where the reaction dynamics strongly depend on solvent properties such as acidity or basicity. A photoacid 8-hydroxypyrene-1,3,6-trisulfonic acid (HPTS) shows a sharp decrease of pKa (7.7 → 0.5) upon photoexcitation, and the excited-state proton transfer (ESPT) occurs with ultrafast time constants of 2.5 and 89 ps in bulk aqueous solution. However, the two-step proton transfers via the contact ion pair formation and the proton diffusion are strongly limited inside the nanopools of reverse micelles (RMs). The confinement in small RMs strongly impeded the proton transfer reactions. In this work, we report the ESPT of HPTS confined in methanol-in-oil RMs by steady-state and time-resolved electronic spectroscopy. Interestingly, HPTS shows substantial deprotonation in the excited state only in small RMs, while the ESPT of HPTS does not occur in bulk methanol solution due to the low basicity of aliphatic alcohols. The kinetic analysis of time-resolved fluorescence and transient absorption measurements will compare the proton transfer dynamics of HPTS in the water-in-oil and methanol-in-oil RMs. The ESPT of photoacids, especially in the nonaqueous RMs, can be crucial in understanding many important chemical reactions involving proton transfer in the confined environments of cells and membranes.

Excited-State Dynamics of a Photoacid: A Potential Probe for Recognizing Transition from Lamellar to Nonlamellar Inverted Structures of Liposome based Nanocarriers

Liposomes of a cationic lipid dioctadecyldimethylammonium bromide (DODAB) are efficient nanocarriers of nucleic acids. Incorporation of a neutral lipid monoolein (MO) in excess (xMO >0.5) changes the lamellar organization of DODAB liposomes into non-lamellar inverted structures of DODAB/MO liposomes facilitating nucleic acid delivery to cells. Photoexcitation of 8-hydroxypyrene-1,3,6-trisulfonic acid (HPTS), a photoacid, initiates an excited state proton transfer (ESPT) reaction in its protonated form (ROH*) generating the deprotonated anionic form (RO- *). The fluorescence intensity ratio (IROH* /IRO-* ) of these two forms is governed by the ESPT dynamics, and increases with increasing MO content (xMO ) in the cationic liposomes of DODAB. Transition from lamellar organization of DODAB liposomes into non-lamellar inverted structures of DODAB/MO liposomes, due to incorporation of MO (xMO ~0.7), is manifested by a significant increase of ESPT time (τPT ) and the time constant of wobbling motion (τW ) of HPTS. Thus, the lamellar organizations of DODAB or DODAB-rich (xMO 0.2) liposomes and the non-lamellar organizations of MO-rich (xMO ~0.7) liposomes are recognized by significantly different excited state dynamics of the photoacid.

Cucurbit [8] uril-based supramolecular fluorescent biomaterials for cytotoxicity and imaging studies of kidney cells

An accurate diagnosis of acute kidney injury (AKI) at the early stage is critical to not only allow preventative treatments in time but also forecast probable medication toxicity for preventing AKI from starting and progressing to severe kidney damage and death. Therefore, supramolecular fluorescent biomaterials based on Q [8] and PEG-APTS have been prepared herein. This study has found that the unique properties of outer surface methine and the positive density of Q [8] can form a stable assembly with PEG-APTS, and has provided the possibility for the faster crossing of the glomerular filtration barrier to enter into the resident cells of the kidney. In addition to the excellent fluorescence properties, the as-synthesized biomaterial Q [8]@PEG-APTS has possessed significantly low biological toxicity. Most importantly, the accumulation of Q [8]@PEG-APTS in large amounts in cytoplasm and nucleus of HK2 and HMCs cells, respectively, within 24 h enabled distinguishing kidney cells when diagnosing and providing some foundation for early AKI.

Beating Heart of Cytochrome c Oxidase: The Shared Proton of Heme a3 Propionates

Cytochrome c oxidase (CcO) pumps protons from the N-side to the P-side and consumes electrons from the P-side of the mitochondrial membrane driven by energy gained from reduction of dioxygen to water. ATP synthesis uses the resulting proton gradient and electrostatic potential difference. Since the distance a proton travels through CcO is too large for a one-step transfer process, proton-loading sites (PLS) that can carry protons transiently are necessary. One specific pump-active PLS couples to the redox reaction, thus energizing the proton to move across the membrane against electric potential and proton gradient. The PLS should also prevent proton backflow. Therefore, the propionates of the two redox-active hemes in CcO were suggested as PLS candidates although, according to CcO crystal structures, none of the four propionates can be protonated on account of strong H-bonds. Here, we show that modeling the local structure around heme a₃ propionates enhances significantly their capability of carrying a proton jointly. This was not possible for the propionates of heme a. The modeled structures are stable in molecular dynamics simulations (MDS) and are energetically similar to the crystal structure. Precise electrostatic energy computations of MDS data are used to estimate the pK_A values of all titratable residues in CcO. For the modeled structures, the heme a₃ propionates have pK_A values high enough to host a proton transiently but not too high to fix the proton permanently. The change in pK_A throughout the redox reaction is sufficient to push the proton to the P-side of the membrane and to provide the protons with the necessary amount of energy for ATP synthesis.

Time-dependent enhancement of fluorescence from Rhodobacter capsulatus SB1003 and its critical dependence on concentration temperature and static magnetic field

Continuous exposure of 395 nm light increases the fluorescence emission intensity of photosynthetic purple non-sulphur bacteria, Rhodobacter capsulatus (SB1003). We show that such an increase in fluorescence emission of extracellular pigment complexes (PC) from these photosynthetic bacteria depends on the concentration of the pigment and temperature and can also be modulated by the static magnetic field. The time-dependent enhanced emission disappears either at or below 300 K or below a threshold sample concentration (0.1 mg/ml). The enhanced emission reappears at this condition (T < 278 K) if a static magnetic field (395 mT) is introduced during fluorescence measurement. The time dependence of emission is expressed in terms of a first-order rate constant, k = dF/(Fdt). The sign of k shifts from positive to negative as PC concentration is lowered than a threshold value, implying onset of fluorescence decay (k < 0) rather than amplification (k > 0). At PC concentration higher than a threshold, k becomes negative if the temperature is lowered. But, surprisingly, at low temperature, a static magnetic field reverts the k value to positive. We explain the logical nature of k-switching and photo-dynamics of the aforesaid microbial fluorescence emission by aggregation of protoporphyrin rings present in the PC. While the simultaneous presence of decay in fluorescence and susceptibility to static magnetic field suggests the dominance of triplet states at low temperatures, the process is reversed by SMF-induced removal of spin degeneracy. At higher temperatures, the optical excitability and lack of magnetic response suggest the dominance of singlet states. We propose that the restructuring of the singlet-triplet distribution by intersystem crossing may be the basis of this logical behaviour. In context with microbial function, time-dependent enhancement of fluorescence also implies relay of red photons to the neighbouring microbes not directly exposed to the incident radiation, thus serving as an indirect photosynthetic regulator.

Time Evolution of Local pH Around a Photo-Acid in Water and a Polymer Hydrogel: Time Resolved Fluorescence Spectroscopy of Pyranine

In this work, we propose a new analysis of the time resolved emission spectra of a photo-acid, HA, pyranine (8-hydroxypyrene-1,3,6-trisulphonic acid, HPTS) based on time resolved area normalized emission spectra (TRANES). Presence of an isoemissive point in TRANES confirms the presence of two emissive species (HA and A^- ) inside the system in bulk water and inside a co-polymer hydrogel [F127, (PEO)₁₀₀ -(PPO)₇₀ -(PEO)₁₀₀ ]. We show that following electronic excitation, the local pH around HPTS, is much lower than the bulk pH presumably because of ejection of proton from the photo-acid in the excited state. With increase in time, the local pH increases and reaches the bulk value. We further, demonstrate that the excited state pKa of HPTS may be estimated from the emission intensities of HA and A^- at long time. The time constant for time evolution of pH is ∼630 ps in water, ∼1300 ps in F127 gel and ∼4700 ps in CTAB micelle. The location and local viscosity sensed by the probe is ascertained using fluorescence correlation spectroscopy (FCS) and fluorescence anisotropy decay. The different values of the local viscosity reported by these two methods are reconciled.

Excited-State Proton Transfer to H2O in Mixtures of CH3CN-H2O of a Superphotoacid, Chlorobenzoate Phenol Cyanine Picolinium (CBCyP)

Steady-state and time-resolved fluorescence techniques were employed to study a superphotoacid with a p K_a* of ∼-7, the chlorobenzoate phenol cyanine picolinium salt (CBCyP) in acetonitrile-water mixtures. We found that the time-resolved fluorescence is bimodal. The amplitude of the short-time component depends on χ_water; the larger χ_water, the greater the amplitude. We found that the excited-state proton-transfer (ESPT) rate constant, k_PT, is ≥5 × 10¹² s^-1 in mixtures of χ_water ≥ 0.08, whereas in neat water, k_PT = 6 × 10¹² s^-1. The long-time component has a lifetime of 50 ps at χ_water = 0.75. We attribute this time component to the CBCyP molecules that are not hydrogen-bonded to H₂O clusters. The results suggest that the ESPT rate constant to water in acetonitrile-water mixtures depends only slightly on the water cluster size and structure surrounding the CBCyP molecule. We attribute the independence of the ESPT rate on the average water-cluster size to the large photoacidity of CBCyP. QM TD-DFT calculations found that in the excited-state the RO^-(S₁) species that is formed by the ESPT process is more stable than the ROH(S₁) species by -5 kcal/mol when four water molecules accept the proton, and when six water molecules accept the proton, the RO^-(S₁) drops to -10 kcal/mol. The calculations show that energy stabilities are kept constant in implicit CH₃CN-H₂O solvent mixtures of dielectric constant of ε ≥ 45.

Live Cell Microscopy: A Physical Chemistry Approach

Probing dynamics of intracellular components using physical chemistry techniques is a remarkable bottom-up approach for understanding the structures and functions of a biological cell. In this "Feature Article", we give an overview on local polarity, solvation, viscosity, acid-base property, red-ox processes (thiol-disulfide exchange), and gene silencing at selected intracellular components inside a live cell. Significant differences have been observed between cancer cells and their noncancer counterparts. We demonstrate that thiol-disulfide exchange, calcium oscillation, and gene silencing are manifested in time dependence of fluorescence intensity. We show that fluorescent gold nanoclusters may be used in drug delivery (e.g., doxorubicin) and selective killing of cancer cells. Further, we discuss dynamics and structural changes of DNA quadruplexes and i-motifs, induced by different external conditions (e.g., pH) and additives (e.g., K⁺ and other target specific small molecules). We demonstrate that peptidomimetic analogues have high specificity over double-stranded DNA for binding with i-motifs and G-quadruplexes. These results may have significant biological implications.

New Phenol Benzoate Cyanine Picolinium Salt Photoacid Excited-State Proton Transfer

Steady-state and time-resolved fluorescence techniques were employed to study the excited-state proton transfer (ESPT) to water and D₂O of a new photoacid, phenol benzoate cyanine picolinium salt (BCyP). We found that the ground-state pK_a is about 6.5, whereas the excited-state pK_a* is about -4.5. The ESPT rate constant, k_PT, to water is ∼0.5 × 10¹²s^-1 (τ_PT ≈ 2 ps) and in D₂O the rate is 0.33 × 10¹² s^-1. We determined that the BCyP photoacid belongs to the third regime of photoacids, the solvent-controlled regime.

Physical chemistry in a single live cell: confocal microscopy

A confocal microscope can be used to differentiate between cancer and non-cancer cells, and to enrich our knowledge of 3D tumor spheroids and drug delivery.

Topological Influence of Lyotropic Liquid Crystalline Systems on Excited-State Proton Transfer Dynamics

In the present work, we have investigated the excited-state proton transfer (ESPT) dynamics inside lipid-based reverse hexagonal (HII), gyroid Ia3d, and diamond Pn3m LLC phases. Polarized light microscopy (PLM) and small-angle X-ray scattering (SAXS) techniques have been employed for the characterization of LLC systems. Time-resolved fluorescence results reveal the retarded ESPT dynamics inside liquid crystalline systems compared to bulk water, and it follows the order HII < Ia3d < Pn3m < H2O. The slower solvation, hampered "Grotthuss" proton transfer process, and most importantly, topological influence, of the LLC systems are believed to be mainly responsible for the slower and different extent of ESPT dynamics. Interestingly, recombination dynamics is found to be faster with respect to bulk water and it follows the order H2O < Pn3m < Ia3d < HII. Faster recombination dynamics arises due to lower dielectric constant and different channel diameters of these LLC systems. However, the dissociation dynamics is found to be slower than bulk water and it follows the order HII < Ia3d < Pn3m < H2O. Differences in critical packing parameter of LLC systems are believed to be the governing factors for the slower dissociation dynamics in these liquid crystalline systems.

Design, Synthesis, and Proticity Inclined Conformational Modulation in a Highly Fluorescent Bichromophoric Naphthalimide Derivative: Hint Directed from RICT Perspective

The present study embodies design, in silico DNA interaction, synthesis of benzothiazole containing naphthalimide derivative, 2-(6-chlorobenzo[d]thiazol-2-yl)-1H-benzo[de] isoquinoline-1,3(2H)-dione (CBIQD) along with its systematic photophysics, solvatochromic behavior, and solvation dynamics using an experimental and theoretical spectroscopic approach. Steady-state dual emission and biexponential fluorescence decay reveals the formation of two different excited species. Ground- and excited-state optimized geometry and the potential-energy curve obtained from DFT and TD-DFT calculation ascertained the existence of nonplanar and planar conformation. When the solvent polarity is changed from nonpolar to protic polar, the feebly emissive emission band highly intensifies probably due to the reversal of n, π*-π, π* emissive state along with consequent modulation of their energy gap that is induced by H-bonding. Excluding nonpolar solvents, in all other solvents, the Stokes shift correlates linearly with orientation polarizability, whereas in water, the story remains intriguing. With photoexcitation, intermolecular H-bonding stimulates the pyramidalization tendency of imide "N" with subsequent conformational change of GS nonplanar geometry to a coplanar one through acceptor rehybridization generating a rehybridized intramolecular charge transfer (RICT) state that caused a dramatic fluorescence upsurge. This allosteric modulation is promoted by excited-state H-bonding dynamics especially in strong H-bond donor water. A close interplay between preferential solvation and the proximity effect is evident in the emission behavior in a benzene (Bn)-ethanol (EtOH) binary mixture. Molecular docking analysis delineates considerable noncovalent sandwiched π-π stacking interactions of CBIQD with the pyrimidine rings as well as with imidazole rings of dG 6 and dG 2 base pairs of B-DNA double helix, which probably suffices the design strategy adopted. Overall, a strategic design to synthesize a highly fluorescent and potential bioactive agent is executed to revolutionize the fluorophore field due its enormous progressive importance in biochemical applications.

Wet Interface of Benzylhexadecyldimethylammonium Chloride Reverse Micelle Revealed by Excited State Proton Transfer of a Localized Probe

Excited state proton transfer (ESPT) of an anionic photoacid 8-hydroxypyrene-1,3,6-trisulfonic acid (HPTS or pyranine) has been studied inside a cationic reverse micelle (RM), water/benzylhexadecyldimethylammonium chloride (BHDC)/benzene, using steady-state and time-resolved fluorescence spectroscopy. The observed ESPT behavior is found to be remarkably different from the known ESPT trend of HPTS inside anionic AOT and cationic CTAB RMs; the ESPT dynamics approaches that of bulk water at higher w0 (≥10) inside AOT RM while no ESPT was observed for CTAB reverse micelle [ Sedgwick J. Am. Chem. Soc. 2012 , 134 , 11904 - 11907 ]. The ESPT dynamics inside BHDC RM is remarkably slower compared to that of water at all w0 (= [water]/[surfactant]) values and relatively much less sensitive to w0 variation compared to AOT RM. 2D NOESY and fluorescence anisotropy measurements reveal that the probe (HPTS) is embedded inside the positive interface of BHDC RM. Despite its trapped location, HPTS is able to undergo ESPT due to significant penetration of water molecules into the interface. Furthermore, facile ESPT at higher w0 is consistent with higher degree of interface hydration as predicted by a recent MD simulation [ Agazzi Langmuir 2014 , 30 , 9643 - 9653 ]. The study shows that ESPT dynamics inside RM varies not only with the interface charge but also on the nature of the headgroup and solvation.