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Calvo F, Falvo C, Parneix P. A simple but accurate potential for the naphthalene-argon complex: Applications to collisional energy transfer and matrix isolated IR spectroscopy. J Chem Phys 2013; 138:034305. [DOI: 10.1063/1.4773469] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Mielke SL, Dinpajooh M, Siepmann JI, Truhlar DG. Efficient methods for including quantum effects in Monte Carlo calculations of large systems: Extension of the displaced points path integral method and other effective potential methods to calculate properties and distributions. J Chem Phys 2013; 138:014110. [PMID: 23298031 DOI: 10.1063/1.4772667] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Steven L Mielke
- Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455-0431, USA.
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4
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Calvo F, Naumkin F, Wales D. Nuclear quantum effects on the stability of cationic neon clusters. Chem Phys Lett 2012. [DOI: 10.1016/j.cplett.2012.09.013] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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5
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Cartarius H, Pollak E. First-order corrections to semiclassical Gaussian partition functions for clusters of atoms. Chem Phys 2012. [DOI: 10.1016/j.chemphys.2011.06.020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Roberts K, Sebsebie R, Curotto E. A rare event sampling method for diffusion Monte Carlo using smart darting. J Chem Phys 2012; 136:074104. [PMID: 22360233 DOI: 10.1063/1.3685453] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We identify a set of multidimensional potential energy surfaces sufficiently complex to cause both the classical parallel tempering and the guided or unguided diffusion Monte Carlo methods to converge too inefficiently for practical applications. The mathematical model is constructed as a linear combination of decoupled Double Wells [(DDW)(n)]. We show that the set (DDW)(n) provides a serious test for new methods aimed at addressing rare event sampling in stochastic simulations. Unlike the typical numerical tests used in these cases, the thermodynamics and the quantum dynamics for (DDW)(n) can be solved deterministically. We use the potential energy set (DDW)(n) to explore and identify methods that can enhance the diffusion Monte Carlo algorithm. We demonstrate that the smart darting method succeeds at reducing quasiergodicity for n ≫ 100 using just 1 × 10(6) moves in classical simulations (DDW)(n). Finally, we prove that smart darting, when incorporated into the regular or the guided diffusion Monte Carlo algorithm, drastically improves its convergence. The new method promises to significantly extend the range of systems computationally tractable by the diffusion Monte Carlo algorithm.
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Affiliation(s)
- K Roberts
- Department of Chemistry and Physics, Arcadia University, Glenside, Pennsylvania 19038-3295, USA
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7
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Cartarius H, Pollak E. Imaginary time Gaussian dynamics of the Ar3 cluster. J Chem Phys 2011; 134:044107. [DOI: 10.1063/1.3530592] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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8
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Calvo F, Parneix P. Phase space theory of evaporation in neon clusters: the role of quantum effects. J Phys Chem A 2010; 113:14352-63. [PMID: 20028160 DOI: 10.1021/jp903282b] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Unimolecular evaporation of neon clusters containing between 14 and 148 atoms is theoretically investigated in the framework of phase space theory. Quantum effects are incorporated in the vibrational densities of states, which include both zero-point and anharmonic contributions, and in the possible tunneling through the centrifugal barrier. The evaporation rates, kinetic energy released, and product angular momentum are calculated as a function of excess energy or temperature in the parent cluster and compared to the classical results. Quantum fluctuations are found to generally increase both the kinetic energy released and the angular momentum of the product, but the effects on the rate constants depend nontrivially on the excess energy. These results are interpreted as due to the very few vibrational states available in the product cluster when described quantum mechanically. Because delocalization also leads to much narrower thermal energy distributions, the variations of evaporation observables as a function of canonical temperature appear much less marked than in the microcanonical ensemble. While quantum effects tend to smooth the caloric curve in the product cluster, the melting phase change clearly keeps a signature on these observables. The microcanonical temperature extracted from fitting the kinetic energy released distribution using an improved Arrhenius form further suggests a backbending in the quantum Ne(13) cluster that is absent in the classical system. Finally, in contrast to delocalization effects, quantum tunneling through the centrifugal barrier does not play any appreciable role on the evaporation kinetics of these rather heavy clusters.
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Affiliation(s)
- F Calvo
- LASIM, Université Claude Bernard Lyon 1 and CNRS UMR 5579, Bat. A. Kastler, 43 Bd du 11 novembre 1918, F69622 Villeurbanne, France
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Pahl E, Calvo F, Koči L, Schwerdtfeger P. Accurate Melting Temperatures for Neon and Argon from Ab Initio Monte Carlo Simulations. Angew Chem Int Ed Engl 2008; 47:8207-10. [DOI: 10.1002/anie.200802743] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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10
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Genaue Schmelztemperaturen für Neon und Argon aus Ab-initio-Monte-Carlo-Simulationen. Angew Chem Int Ed Engl 2008. [DOI: 10.1002/ange.200802743] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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11
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Curotto E, Freeman DL, Doll JD. A stereographic projection path integral study of the coupling between the orientation and the bending degrees of freedom of water. J Chem Phys 2008; 128:204107. [DOI: 10.1063/1.2925681] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Avilés MW, McCandless ML, Curotto E. Stereographic projection path integral simulations of (HCl)n clusters (n=2–5): Evidence of quantum induced melting in small hydrogen bonded networks. J Chem Phys 2008; 128:124517. [DOI: 10.1063/1.2837802] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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13
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Langley SF, Curotto E, Freeman DL, Doll JD. Rigid quantum Monte Carlo simulations of condensed molecular matter: Water clusters in the n=2→8 range. J Chem Phys 2007; 126:084506. [PMID: 17343457 DOI: 10.1063/1.2484229] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The numerical advantage of quantum Monte Carlo simulations of rigid bodies relative to the flexible simulations is investigated for some simple systems. The results show that if high frequency modes in molecular condensed matter are predominantly in the ground state, the convergence of path integral simulations becomes nonuniform. Rigid body quantum parallel tempering simulations are necessary to accurately capture thermodynamic phenomena in the temperature range where the dynamics are influenced by intermolecular degrees of freedom; the stereographic projection path integral adapted for quantum simulations of asymmetric tops is a significantly more efficient strategy compared with Cartesian coordinate simulations for molecular condensed matter under these conditions. The reweighted random series approach for stereographic path integral Monte Carlo is refined and implemented for the quantum simulation of water clusters treated as an assembly of rigid asymmetric tops.
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Affiliation(s)
- Stephen F Langley
- Department of Chemistry, Arcadia University, Glenside, Pennsylvania 19038-3295, USA
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14
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Avilés MW, Gray PT, Curotto E. Stereographic projection path-integral simulations of (HF)n clusters. J Chem Phys 2006; 124:174305. [PMID: 16689569 DOI: 10.1063/1.2192773] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We perform several quantum canonical ensemble simulations of (HF)(n) clusters. The HF stretches are rigid, and the stereographic projection path-integral method is employed for the simulation in the resulting curved configuration space. We make use of the reweighted random series techniques to accelerate the convergence of the path-integral simulation with respect to the number of path coefficients. We develop and test estimators for the total energy and heat capacity based on a finite difference approach for non-Euclidean spaces. The quantum effects at temperatures below 400 K are substantial for all sizes. We observe interesting thermodynamic behaviors in the quantum simulations of the octamer and the heptamer.
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Affiliation(s)
- Michael W Avilés
- Department of Chemistry and Physics, Arcadia University, Glenside, Pennsylvania 19038, USA
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Yang S, Yamamoto T, Miller WH. Path-integral virial estimator for reaction-rate calculation based on the quantum instanton approximation. J Chem Phys 2006; 124:084102. [PMID: 16512703 DOI: 10.1063/1.2171693] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Abstract
The quantum instanton approximation is a type of quantum transition-state theory that calculates the chemical reaction rate using the reactive flux correlation function and its low-order derivatives at time zero. Here we present several path-integral estimators for the latter quantities, which characterize the initial decay profile of the flux correlation function. As with the internal energy or heat-capacity calculation, different estimators yield different variances (and therefore different convergence properties) in a Monte Carlo calculation. Here we obtain a virial (-type) estimator by using a coordinate scaling procedure rather than integration by parts, which allows more computational benefits. We also consider two different methods for treating the flux operator, i.e., local-path and global-path approaches, in which the latter achieves a smaller variance at the cost of using second-order potential derivatives. Numerical tests are performed for a one-dimensional Eckart barrier and a model proton transfer reaction in a polar solvent, which illustrates the reduced variance of the virial estimator over the corresponding thermodynamic estimator.
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Affiliation(s)
- Sandy Yang
- Department of Chemistry and Kenneth S. Pitzer Center for Theoretical Chemistry, University of California, Berkeley, California 94720-1460, USA
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16
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Derrickson SW, Bittner ER. A Self-Consistent Field Quantum Hydrodynamic Approach for Molecular Clusters. J Phys Chem A 2006; 110:5333-41. [PMID: 16623460 DOI: 10.1021/jp055889q] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We present a novel self-consistent orbital-free method useful for quantum clusters. The method uses a hydrodynamical approach based on the de Broglie-Bohm description of quantum mechanics to satisfy an orbital-free density functional-like Euler-Lagrange equation for the ground state of the system. In addition, we use an information theoretical approach to obtain the optimal density function derived from a series of statistical sample points in terms of density approximates. These are then used to calculate an approximation to the quantum force in the hydrodynamic description. As a demonstration of the utility and flexibility of the approach, we compute the lowest-energy structures for small rare-glass clusters of argon and neon with 4, 5, 13, and 19 atoms. Extension to more complex systems is straightforward.
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Affiliation(s)
- Sean W Derrickson
- Department of Chemistry, University of Houston, Houston, Texas 77204, USA.
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Bogdan TV, Wales DJ, Calvo F. Equilibrium thermodynamics from basin-sampling. J Chem Phys 2006; 124:044102. [PMID: 16460144 DOI: 10.1063/1.2148958] [Citation(s) in RCA: 79] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We present a "basin-sampling" approach for calculation of the potential energy density of states for classical statistical models. It combines a Wang-Landau-type uniform sampling of local minima and a novel approach for approximating the relative contributions from local minima in terms of the volumes of basins of attraction. We have employed basin-sampling to study phase changes in atomic clusters modeled by the Lennard-Jones potential and for ionic clusters. The approach proves to be efficient for systems involving broken ergodicity and has allowed us to calculate converged heat capacity curves for systems that could previously only be treated using the harmonic superposition approximation. Benchmarks are also provided by comparison with parallel tempering and Wang-Landau simulations, where these proved feasible.
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Affiliation(s)
- Tetyana V Bogdan
- University Chemical Laboratories, Lensfield Road, Cambridge CB2 1EW, UK
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Pav DM, Curotto E. Parallel tempering simulations of the 13-center Lennard-Jones dipole-dipole cluster (muD=0-->0.5 a.u.). J Chem Phys 2005; 123:144301. [PMID: 16238385 DOI: 10.1063/1.2049279] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We investigate the thermodynamic behavior of the thirteen center uniform Lennard-Jones dipole-dipole cluster [(LJDD)(13)] for a wide range of dipole moment strengths. We find a relatively wide range of potential parameters where solid-solid coexistence manifests itself. Using structural characterization methods we determine the shape of the few isomers that contribute to the solid-solid coexistence region. The thermal distributions of the size of the net dipole moment are broad even at the coldest temperatures of the simulation where the (LJDD)(13) cluster is solid.
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Affiliation(s)
- Dawn M Pav
- Department of Chemistry and Physics, Arcadia University, Glenside, Pennsylvania 19038, USA
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Curotto E. A reweighted random series method for stereographic projection path integrals. J Chem Phys 2005; 123:134102. [PMID: 16223270 DOI: 10.1063/1.2036970] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
A set of general reweighted random series methods for metric affine spaces is developed. The extension of the theorems to metric affine spaces demands the introduction of a configuration-independent reference metric tensor; this geometric object is used to treat the path expansion coefficients beyond the core path, in both the partial averaging and the reweighted random series approach. Numerical tests are conducted by simulating a particle in a ring. The reweighted random series results show better convergence properties and better statistical quality at a fraction of the cost compared with the related partial averaging simulation.
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Affiliation(s)
- E Curotto
- Department of Chemistry and Physics, Arcadia University, Glenside, Pennsylvania 19038, USA.
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Shiga M, Shinoda W. Calculation of heat capacities of light and heavy water by path-integral molecular dynamics. J Chem Phys 2005; 123:134502. [PMID: 16223309 DOI: 10.1063/1.2035078] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
As an application of atomistic simulation methods to heat capacities, path-integral molecular dynamics has been used to calculate the constant-volume heat capacities of light and heavy water in the gas, liquid, and solid phases. While the classical simulation based on conventional molecular dynamics has estimated the heat capacities too high, the quantum simulation based on path-integral molecular dynamics has given reasonable results based on the simple point-charge/flexible potential model. The calculated heat capacities (divided by the Boltzmann constant) in the quantum simulation are 3.1 in the vapor H2O at 300 K, 6.9 in the liquid H2O at 300 K, and 4.1 in the ice Ih H2O at 250 K, respectively, which are comparable to the experimental data of 3.04, 8.9, and 4.1, respectively. The quantum simulation also reproduces the isotope effect. The heat capacity in the liquid D2O has been calculated to be 10% higher than that of H2O, while it is 13% higher in the experiment. The results demonstrate that the path-integral simulation is a promising approach to quantitatively evaluate the heat capacities for molecular systems, taking account of quantum-mechanical vibrations as well as strongly anharmonic motions.
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Affiliation(s)
- Motoyuki Shiga
- Center for Promotion of Computational Science and Engineering, Japan Atomic Energy Research Institute, 6-9-3, Higashi-Ueno, Taito-ku, Tokyo 110-0015, Japan.
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Abstract
An alternative exchange strategy for parallel tempering simulations is introduced. Instead of attempting to swap configurations between two randomly chosen but adjacent replicas, the acceptance probabilities of all possible swap moves are calculated a priori. One specific swap move is then selected according to its probability and enforced. The efficiency of the method is illustrated first on the case of two Lennard-Jones (LJ) clusters containing 13 and 31 atoms, respectively. The convergence of the caloric curve is seen to be at least twice as fast as in conventional parallel tempering simulations, especially for the difficult case of LJ31. Further evidence for an improved efficiency is reported on the ergodic measure introduced by Mountain and Thirumalai [J. Phys. Chem. 93, 6975 (1989)], calculated here for LJ13 close to the melting point. Finally, tests on two simple spin systems indicate that the method should be particularly useful when a limited number of replicas are available.
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Affiliation(s)
- F Calvo
- Laboratoire de Physique Quantique, Institut de Recherche sur les Systèmes Atomiques et Moléculaires Complexes (IRSAMC), Université Paul Sabatier, 118 Route de Narbonne, F31062 Toulouse, France.
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Yamamoto TM. Path-integral virial estimator based on the scaling of fluctuation coordinates: Application to quantum clusters with fourth-order propagators. J Chem Phys 2005; 123:104101. [PMID: 16178583 DOI: 10.1063/1.2013257] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023] Open
Abstract
We first show that a simple scaling of fluctuation coordinates defined in terms of a given reference point gives the conventional virial estimator in discretized path integral, where different choices of the reference point lead to different forms of the estimator (e.g., centroid virial). The merit of this procedure is that it allows a finite-difference evaluation of the virial estimator with respect to temperature, which totally avoids the need of higher-order potential derivatives. We apply this procedure to energy and heat-capacity calculations of the (H(2))(22) and Ne(13) clusters at low temperature using the fourth-order Takahashi-Imada [J. Phys. Soc. Jpn. 53, 3765 (1984)] and Suzuki [Phys. Lett. A 201, 425 (1995)] propagators. This type of calculation requires up to third-order potential derivatives if analytical virial estimators are used, but in practice only first-order derivatives suffice by virtue of the finite-difference scheme above. From the application to quantum clusters, we find that the fourth-order propagators do improve upon the primitive approximation, and that the choice of the reference point plays a vital role in reducing the variance of the virial estimator.
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Affiliation(s)
- Takeshi M Yamamoto
- Department of Chemistry, Graduate School of Science, Kyoto University, Japan.
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Chakravarty C. Hybrid Monte Carlo implementation of the Fourier path integral algorithm. J Chem Phys 2005; 123:24104. [PMID: 16050738 DOI: 10.1063/1.1990114] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
This paper formulates a hybrid Monte Carlo implementation of the Fourier path integral (FPI-HMC) approach with partial averaging. Such a hybrid Monte Carlo approach allows one to generate collective moves through configuration space using molecular dynamics while retaining the computational advantages associated with the Fourier path integral Monte Carlo method. In comparison with the earlier Metropolis Monte Carlo implementations of the FPI algorithm, the present HMC method is shown to be significantly more efficient for quantum Lennard-Jones solids and suggests that such algorithms may prove useful for efficient simulations of a range of atomic and molecular systems.
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Affiliation(s)
- Charusita Chakravarty
- Department of Chemistry, Indian Institute of Technology-Delhi, New Delhi, 110016, India.
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Avilés MW, Curotto E. Partial averaging and the centroid virial estimator for stereographic projection path-integral simulations in curved spaces. J Chem Phys 2005; 122:164109. [PMID: 15945674 DOI: 10.1063/1.1884109] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We develop and test three different partial averaging theories for the stereographic projection path integral in curved spaces. Additionally, we adapt and test the centroid virial estimator for the kinetic energy in curved spaces. We tested both a confining as well as a nonconfining potential for the particle in a ring. All three partial averaging theories are demonstrated to converge linearly in the asymptotic region with k(-2)max, the number of Fourier coefficients. We use an error estimator to determine the optimal parameters for an extrapolation to infinite kmax. We verify that the centroid virial estimator (derived from the primitive DeWitt path-integral formula) converges to the kinetic energy for both confining and nonconfining potentials.
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Affiliation(s)
- Michael W Avilés
- Department of Chemistry and Physics, Arcadia University, Glenside, Pennsylvania 19038, USA
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Predescu C, Frantsuzov PA, Mandelshtam VA. Thermodynamics and equilibrium structure of Ne38 cluster: Quantum mechanics versus classical. J Chem Phys 2005; 122:154305. [PMID: 15945633 DOI: 10.1063/1.1860331] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Abstract
The equilibrium properties of classical Lennard-Jones (LJ38) versus quantum Ne38 Lennard-Jones clusters are investigated. The quantum simulations use both the path-integral Monte Carlo (PIMC) and the recently developed variational-Gaussian wave packet Monte Carlo (VGW-MC) methods. The PIMC and the classical MC simulations are implemented in the parallel tempering framework. The classical heat capacity Cv(T) curve agrees well with that of Neirotti et al. [J. Chem. Phys. 112, 10340 (2000)], although a much larger confining sphere is used in the present work. The classical Cv(T) shows a peak at about 6 K, interpreted as a solid-liquid transition, and a shoulder at approximately 4 K, attributed to a solid-solid transition involving structures from the global octahedral (Oh) minimum and the main icosahedral (C5v) minimum. The VGW method is used to locate and characterize the low energy states of Ne38, which are then further refined by PIMC calculations. Unlike the classical case, the ground state of Ne38 is a liquidlike structure. Among the several liquidlike states with energies below the two symmetric states (Oh and C5v), the lowest two exhibit strong delocalization over basins associated with at least two classical local minima. Because the symmetric structures do not play an essential role in the thermodynamics of Ne38, the quantum heat capacity is a featureless curve indicative of the absence of any structural transformations. Good agreement between the two methods, VGW and PIMC, is obtained. The present results are also consistent with the predictions by Calvo et al. [J. Chem. Phys. 114, 7312 (2001)] based on the quantum superposition method within the harmonic approximation. However, because of its approximate nature, the latter method leads to an incorrect assignment of the Ne38 ground state as well as to a significant underestimation of the heat capacity.
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Affiliation(s)
- Cristian Predescu
- Chemistry Department, University of California at Berkeley, Berkeley, California 94720, USA
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Predescu C. Lévy-Ciesielski random series as a useful platform for Monte Carlo path integral sampling. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2005; 71:046707. [PMID: 15903818 DOI: 10.1103/physreve.71.046707] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2004] [Indexed: 05/02/2023]
Abstract
We demonstrate that the Lévy-Ciesielski implementation of Lie-Trotter products enjoys several properties that make it extremely suitable for path-integral Monte Carlo simulations: fast computation of paths, fast Monte Carlo sampling, and the ability to use different numbers of time slices for the different degrees of freedom, commensurate with the quantum effects. It is demonstrated that a Monte Carlo simulation for which particles or small groups of variables are updated in a sequential fashion has a statistical efficiency that is always comparable to or better than that of an all-particle or all-variable update sampler. The sequential sampler results in significant computational savings if updating a variable costs only a fraction of the cost for updating all variables simultaneously or if the variables are independent. In the Lévy-Ciesielski representation, the path variables are grouped in a small number of layers, with the variables from the same layer being statistically independent. The superior performance of the fast sampling algorithm is shown to be a consequence of these observations. Both mathematical arguments and numerical simulations are employed in order to quantify the computational advantages of the sequential sampler, the Lévy-Ciesielski implementation of path integrals, and the fast sampling algorithm.
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Affiliation(s)
- Cristian Predescu
- Department of Chemistry and Kenneth S. Pitzer Center for Theoretical Chemistry, University of California, Berkeley, California 94720, USA.
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27
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Frantsuzov PA, Mandelshtam VA. Quantum statistical mechanics with Gaussians: Equilibrium properties of van der Waals clusters. J Chem Phys 2004; 121:9247-56. [PMID: 15538845 DOI: 10.1063/1.1804495] [Citation(s) in RCA: 85] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The variational Gaussian wave-packet method for computation of equilibrium density matrices of quantum many-body systems is further developed. The density matrix is expressed in terms of Gaussian resolution, in which each Gaussian is propagated independently in imaginary time beta=(k(B)T)(-1) starting at the classical limit beta=0. For an N-particle system a Gaussian exp[(r-q)(T)G(r-q)+gamma] is represented by its center qinR(3N), the width matrix GinR(3Nx3N), and the scale gammainR, all treated as dynamical variables. Evaluation of observables is done by Monte Carlo sampling of the initial Gaussian positions. As demonstrated previously at not-very-low temperatures the method is surprisingly accurate for a range of model systems including the case of double-well potential. Ideally, a single Gaussian propagation requires numerical effort comparable to the propagation of a single classical trajectory for a system with 9(N(2)+N)/2 degrees of freedom. Furthermore, an approximation based on a direct product of single-particle Gaussians, rather than a fully coupled Gaussian, reduces the number of dynamical variables to 9N. The success of the methodology depends on whether various Gaussian integrals needed for calculation of, e.g., the potential matrix elements or pair correlation functions could be evaluated efficiently. We present techniques to accomplish these goals and apply the method to compute the heat capacity and radial pair correlation function of Ne(13) Lennard-Jones cluster. Our results agree very well with the available path-integral Monte Carlo calculations.
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Affiliation(s)
- Pavel A Frantsuzov
- Chemistry Department, University of California at Irvine, Irvine, California 92697, USA
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Oppenheimer CA, Curotto E. Parameter space minimization methods: Applications to Lennard-Jones–dipole-dipole clusters. J Chem Phys 2004; 121:6226-39. [PMID: 15446915 DOI: 10.1063/1.1786916] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Abstract
The morphology of the uniform Lennard-Jones-dipole-dipole cluster with 13 centers (LJDD)13 is investigated over a relatively wide range of values of the dipole moment. We introduce and compare several necessary modifications of the basin-hopping algorithm for global optimization to improve its efficiency. We develop a general algorithm for T=0 Brownian dynamics in curved spaces, and a graph theoretical approach necessary for the elimination of dissociated states. We find that the (LJDD)13 cluster has icosahedral symmetry for small to moderate values of the dipole moment. As the dipole moment increases, however, its morphology shifts to an hexagonal antiprism, and eventually to a ring.
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Affiliation(s)
- Craig A Oppenheimer
- Department of Chemistry and Physics, Arcadia University, Glenside, Pennsylvania 19038-3295, USA
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Sabo D, Predescu C, Doll JD, Freeman DL. Phase changes in selected Lennard-Jones X13−nYn clusters. J Chem Phys 2004; 121:856-67. [PMID: 15260616 DOI: 10.1063/1.1759625] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Detailed studies of the thermodynamic properties of selected binary Lennard-Jones clusters of the type X13-nYn (where n=1, 2, 3) are presented. The total energy, heat capacity, and first derivative of the heat capacity as a function of temperature are calculated by using the classical and path integral Monte Carlo methods combined with the parallel tempering technique. A modification in the phase change phenomena from the presence of impurity atoms and quantum effects is investigated.
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Affiliation(s)
- Dubravko Sabo
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA.
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Russo MF, Curotto E. Stereographic projections path integral for inertia ellipsoids: Applications to Arn–HF clusters. J Chem Phys 2004; 120:2110-21. [PMID: 15268349 DOI: 10.1063/1.1636694] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The DeWitt formula for inertia ellipsoids mapped by stereographic projection coordinates is developed. We discover that by remapping the quaternion parameter space with stereographic projections, considerable simplification of the differential geometry for the inertia ellipsoid with spherical symmetry takes place. The metric tensor is diagonal and contains only one independent element in that case. We find no difficulties testing and implementing the DeWitt formula for the inertia ellipsoids of asymmetric tops mapped by stereographic projections. The path integral algorithm for the treatment of Rm x S2 manifolds based on a mixture of Cartesian and stereographic projection coordinates is tested for small Arn-HF clusters in the n = 2 to n = 5 range. In particular, we determine the quantum effects of the red shift and the isomerization patterns at finite temperatures. Our findings are consistent with previously reported computations and experimental data for small Arn-HF clusters.
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Affiliation(s)
- M F Russo
- Department of Chemistry and Physics, Arcadia University, Glenside, Pennsylvania 19038, USA
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Predescu C, Sabo D, Doll JD, Freeman DL. Heat capacity estimators for random series path-integral methods by finite-difference schemes. J Chem Phys 2003. [DOI: 10.1063/1.1625366] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Calvo F, Spiegelman F, Heitz MC. Theoretical study of finite-temperature spectroscopy in van der Waals clusters. I. Probing phase changes in CaArn. J Chem Phys 2003. [DOI: 10.1063/1.1566950] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Russo MF, Curotto E. Stereographic projections path integral in S1 and (S2)m manifolds. J Chem Phys 2003. [DOI: 10.1063/1.1560936] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Glaesemann KR, Fried LE. Improved heat capacity estimator for path integral simulations. J Chem Phys 2002. [DOI: 10.1063/1.1493184] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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35
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López GE. Quantum effects in the solid–liquid phase diagram of Ne13 and (para-H2)13. J Chem Phys 2002. [DOI: 10.1063/1.1489421] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Calvo F, Doye JPK, Wales DJ. Characterization of anharmonicities on complex potential energy surfaces: Perturbation theory and simulation. J Chem Phys 2001. [DOI: 10.1063/1.1415462] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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38
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Calvo F, Doye JPK, Wales DJ. Quantum partition functions from classical distributions: Application to rare-gas clusters. J Chem Phys 2001. [DOI: 10.1063/1.1359768] [Citation(s) in RCA: 112] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Neirotti JP, Freeman DL, Doll JD. Approach to ergodicity in monte carlo simulations. PHYSICAL REVIEW. E, STATISTICAL PHYSICS, PLASMAS, FLUIDS, AND RELATED INTERDISCIPLINARY TOPICS 2000; 62:7445-7461. [PMID: 11102107 DOI: 10.1103/physreve.62.7445] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2000] [Indexed: 05/23/2023]
Abstract
The approach to the ergodic limit in Monte Carlo simulations is studied using both analytic and numerical methods. With the help of a stochastic model, a metric is defined that enables the examination of a simulation in both the ergodic and nonergodic regimes. In the nonergodic regime, the model implies how the simulation is expected to approach ergodic behavior analytically, and the analytically inferred decay law of the metric allows the monitoring of the onset of ergodic behavior. The metric is related to previously defined measures developed for molecular dynamics simulations, and the metric enables the comparison of the relative efficiencies of different Monte Carlo schemes. Applications to Lennard-Jones 13-particle clusters are shown to match the model for Metropolis, J-walking, and parallel tempering based approaches. The relative efficiencies of these three Monte Carlo approaches are compared, and the decay law is shown to be useful in determining needed high temperature parameters in parallel tempering and J-walking studies of atomic clusters.
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Affiliation(s)
- JP Neirotti
- Department of Chemistry, University of Rhode Island, 51 Lower College Road, Kingston, Rhode Island 02881-0809, USA
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