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For: Kim HW, Rhee YM. Improving long time behavior of Poisson bracket mapping equation: A non-Hamiltonian approach. J Chem Phys 2014;140:184106. [DOI: 10.1063/1.4874268] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
Number Cited by Other Article(s)
1
Kim CW, Franco I. General framework for quantifying dissipation pathways in open quantum systems. II. Numerical validation and the role of non-Markovianity. J Chem Phys 2024;160:214112. [PMID: 38833365 DOI: 10.1063/5.0202862] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2024] [Accepted: 05/13/2024] [Indexed: 06/06/2024]  Open
2
Kim CW, Franco I. General framework for quantifying dissipation pathways in open quantum systems. I. Theoretical formulation. J Chem Phys 2024;160:214111. [PMID: 38833366 DOI: 10.1063/5.0202860] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2024] [Accepted: 05/13/2024] [Indexed: 06/06/2024]  Open
3
Kang DH, Cho KH, Kim J, Eun HJ, Rhee YM, Kim SK. Electron-Binding Dynamics of the Dipole-Bound State: Correlation Effect on the Autodetachment Dynamics. J Am Chem Soc 2023;145:25824-25833. [PMID: 37972034 DOI: 10.1021/jacs.3c10099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2023]
4
Cook L, Runeson JE, Richardson JO, Hele TJH. Which Algorithm Best Propagates the Meyer-Miller-Stock-Thoss Mapping Hamiltonian for Non-Adiabatic Dynamics? J Chem Theory Comput 2023;19:6109-6125. [PMID: 37704193 PMCID: PMC10536990 DOI: 10.1021/acs.jctc.3c00709] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Indexed: 09/15/2023]
5
Bossion DL, Ying W, Chowdhury S, Huo P. Non-adiabatic Mapping Dynamics in the Phase Space of the ${SU}(N)$ Lie Group. J Chem Phys 2022;157:084105. [DOI: 10.1063/5.0094893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
6
DECIDE: A Deterministic Mixed Quantum-Classical Dynamics Approach. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12147022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
7
Mannouch JR, Richardson JO. A partially linearized spin-mapping approach for simulating nonlinear optical spectra. J Chem Phys 2022;156:024108. [PMID: 35032975 DOI: 10.1063/5.0077744] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
8
Kim HW, Rhee YM. Two‐dimensional electronic spectrum simulation of simple photosynthetic complex models with semi‐classical Poisson bracket mapping equation. B KOREAN CHEM SOC 2022. [DOI: 10.1002/bkcs.12469] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
9
Braver Y, Valkunas L, Gelzinis A. Stark absorption and Stark fluorescence spectroscopies: Theory and simulations. J Chem Phys 2021;155:244101. [PMID: 34972359 DOI: 10.1063/5.0073962] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
10
Cho KH, Rhee YM. Computational elucidations on the role of vibrations in energy transfer processes of photosynthetic complexes. Phys Chem Chem Phys 2021;23:26623-26639. [PMID: 34842245 DOI: 10.1039/d1cp04615b] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
11
Braver Y, Valkunas L, Gelzinis A. Quantum-Classical Approach for Calculations of Absorption and Fluorescence: Principles and Applications. J Chem Theory Comput 2021;17:7157-7168. [PMID: 34618457 PMCID: PMC8719324 DOI: 10.1021/acs.jctc.1c00777] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Indexed: 01/20/2023]
12
Kim I, Cho KH, Jeon SO, Son WJ, Kim D, Rhee YM, Jang I, Choi H, Kim DS. Three States Involving Vibronic Resonance is a Key to Enhancing Reverse Intersystem Crossing Dynamics of an Organoboron-Based Ultrapure Blue Emitter. JACS AU 2021;1:987-997. [PMID: 34467345 PMCID: PMC8395647 DOI: 10.1021/jacsau.1c00179] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Indexed: 05/26/2023]
13
Cho KH, Rhee YM. Cooperation between Excitation Energy Transfer and Antisynchronously Coupled Vibrations. J Phys Chem B 2021;125:5601-5610. [PMID: 34013724 DOI: 10.1021/acs.jpcb.1c01194] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
14
Hu D, Xie Y, Peng J, Lan Z. On-the-Fly Symmetrical Quasi-Classical Dynamics with Meyer-Miller Mapping Hamiltonian for the Treatment of Nonadiabatic Dynamics at Conical Intersections. J Chem Theory Comput 2021;17:3267-3279. [PMID: 34028268 DOI: 10.1021/acs.jctc.0c01249] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
15
Chowdhury SN, Huo P. Non-adiabatic Matsubara dynamics and non-adiabatic ring-polymer molecular dynamics. J Chem Phys 2021;154:124124. [PMID: 33810665 DOI: 10.1063/5.0042136] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]  Open
16
Kim CW, Franco I. Theory of dissipation pathways in open quantum systems. J Chem Phys 2021;154:084109. [PMID: 33639757 DOI: 10.1063/5.0038967] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
17
Kim HW, Rhee YM. Two-oscillator mapping modification of the Poisson bracket mapping equation formulation of the quantum-classical Liouville equation. J Chem Phys 2020;153:214103. [PMID: 33291890 DOI: 10.1063/5.0027799] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
18
Kim CW, Rhee YM. Toward monitoring the dissipative vibrational energy flows in open quantum systems by mixed quantum-classical simulations. J Chem Phys 2020;152:244109. [PMID: 32610983 DOI: 10.1063/5.0009867] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]  Open
19
Braver Y, Valkunas L, Gelzinis A. Benchmarking the forward–backward trajectory solution of the quantum-classical Liouville equation. J Chem Phys 2020;152:214116. [DOI: 10.1063/5.0006538] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
20
Smith B, Akimov AV. Modeling nonadiabatic dynamics in condensed matter materials: some recent advances and applications. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2020;32:073001. [PMID: 31661681 DOI: 10.1088/1361-648x/ab5246] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
21
Kim CW, Lee WG, Kim I, Rhee YM. Effect of Underdamped Vibration on Excitation Energy Transfer: Direct Comparison between Two Different Partitioning Schemes. J Phys Chem A 2019;123:1186-1197. [DOI: 10.1021/acs.jpca.8b10977] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
22
Liu J, Hsieh CY, Segal D, Hanna G. Heat transfer statistics in mixed quantum-classical systems. J Chem Phys 2018;149:224104. [PMID: 30553258 DOI: 10.1063/1.5066025] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]  Open
23
Xie Y, Zheng J, Lan Z. Performance evaluation of the symmetrical quasi-classical dynamics method based on Meyer-Miller mapping Hamiltonian in the treatment of site-exciton models. J Chem Phys 2018;149:174105. [DOI: 10.1063/1.5047002] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
24
Liu J, Hanna G. Efficient and Deterministic Propagation of Mixed Quantum-Classical Liouville Dynamics. J Phys Chem Lett 2018;9:3928-3933. [PMID: 29947224 DOI: 10.1021/acs.jpclett.8b01619] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
25
Kananenka AA, Hsieh CY, Cao J, Geva E. Nonadiabatic Dynamics via the Symmetrical Quasi-Classical Method in the Presence of Anharmonicity. J Phys Chem Lett 2018;9:319-326. [PMID: 29239614 DOI: 10.1021/acs.jpclett.7b03002] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
26
Kapral R. Surface hopping from the perspective of quantum–classical Liouville dynamics. Chem Phys 2016. [DOI: 10.1016/j.chemphys.2016.05.016] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
27
Freedman H, Hanna G. Mixed quantum–classical Liouville simulation of vibrational energy transfer in a model α-helix at 300 K. Chem Phys 2016. [DOI: 10.1016/j.chemphys.2016.08.015] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
28
Lee MK, Huo P, Coker DF. Semiclassical Path Integral Dynamics: Photosynthetic Energy Transfer with Realistic Environment Interactions. Annu Rev Phys Chem 2016;67:639-68. [DOI: 10.1146/annurev-physchem-040215-112252] [Citation(s) in RCA: 96] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
29
Subotnik JE, Jain A, Landry B, Petit A, Ouyang W, Bellonzi N. Understanding the Surface Hopping View of Electronic Transitions and Decoherence. Annu Rev Phys Chem 2016;67:387-417. [DOI: 10.1146/annurev-physchem-040215-112245] [Citation(s) in RCA: 234] [Impact Index Per Article: 29.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
30
Bellonzi N, Jain A, Subotnik JE. An assessment of mean-field mixed semiclassical approaches: Equilibrium populations and algorithm stability. J Chem Phys 2016;144:154110. [DOI: 10.1063/1.4946810] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
31
Martinez F, Hanna G. Mixed Quantum-Classical Simulations of Transient Absorption Pump–Probe Signals for a Photo-Induced Electron Transfer Reaction Coupled to an Inner-Sphere Vibrational Mode. J Phys Chem A 2016;120:3196-205. [DOI: 10.1021/acs.jpca.5b11727] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
32
Ouyang W, Dou W, Subotnik JE. Surface hopping with a manifold of electronic states. I. Incorporating surface-leaking to capture lifetimes. J Chem Phys 2015;142:084109. [PMID: 25725714 DOI: 10.1063/1.4908032] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
33
Kapral R. Quantum dynamics in open quantum-classical systems. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2015;27:073201. [PMID: 25634784 DOI: 10.1088/0953-8984/27/7/073201] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
34
Subotnik JE, Rhee YM. On surface hopping and time-reversal. J Phys Chem A 2015;119:990-5. [PMID: 25635926 DOI: 10.1021/jp512024w] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
35
Kim HW, Lee WG, Rhee YM. Improving long time behavior of Poisson bracket mapping equation: A mapping variable scaling approach. J Chem Phys 2014;141:124107. [DOI: 10.1063/1.4895962] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
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