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García-Alfonso E, Barranco M, Halberstadt N, Pi M. Time-resolved solvation of alkali ions in superfluid helium nanodroplets. J Chem Phys 2024; 160:164308. [PMID: 38651804 DOI: 10.1063/5.0205951] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Accepted: 03/29/2024] [Indexed: 04/25/2024] Open
Abstract
The sinking of alkali cations in superfluid 4He nanodroplets is investigated theoretically using liquid 4He time-dependent density functional theory at zero temperature. The simulations illustrate the dynamics of the buildup of the first solvation shell around the ions. The number of helium atoms in this shell is found to linearly increase with time during the first stages of the dynamics. This points to a Poissonian capture process, as concluded in the work of Albrechtsen et al. on the primary steps of Na+ solvation in helium droplets [Albrechtsen et al., Nature 623, 319 (2023)]. The energy dissipation rate by helium atom ejection is found to be quite similar between all alkalis, the main difference being a larger energy dissipated per atom for the lighter alkalis at the beginning of the dynamics. In addition, the number of helium atoms in the first solvation shell is found to be lower at the end of the dynamics than at equilibrium for both Li+ and Na+, pointing to a kinetic rather than thermodynamical control of the snowball size for small and strongly attractive ions.
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Affiliation(s)
- Ernesto García-Alfonso
- Laboratoire Collisions, Agrégats, Réactivité (LCAR), Université de Toulouse, CNRS, 31062 Toulouse, France
| | - Manuel Barranco
- Departament FQA, Facultat de Física, Universitat de Barcelona, Av. Diagonal 645, 08028 Barcelona, Spain
- Institute of Nanoscience and Nanotechnology (IN2UB), Universitat de Barcelona, Barcelona, Spain
| | - Nadine Halberstadt
- Laboratoire Collisions, Agrégats, Réactivité (LCAR), Université de Toulouse, CNRS, 31062 Toulouse, France
| | - Martí Pi
- Departament FQA, Facultat de Física, Universitat de Barcelona, Av. Diagonal 645, 08028 Barcelona, Spain
- Institute of Nanoscience and Nanotechnology (IN2UB), Universitat de Barcelona, Barcelona, Spain
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2
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Zahid MN, Kosar N, Sajid H, Ibrahim KE, Gatasheh MK, Mahmood T. Unveiling the Potential of B 3O 3 Nanoflake as Effective Transporter for the Antiviral Drug Favipiravir: Density Functional Theory Analysis. Molecules 2023; 28:8092. [PMID: 38138581 PMCID: PMC10746011 DOI: 10.3390/molecules28248092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 11/23/2023] [Accepted: 11/28/2023] [Indexed: 12/24/2023] Open
Abstract
In this study, for the first time, boron oxide nanoflake is analyzed as drug carrier for favipiravir using computational studies. The thermodynamic stability of the boron oxide and favipiravir justifies the strong interaction between both species. Four orientations are investigated for the interaction between the favipiravir and the B3O3 nanoflake. The Eint of the most stable orientation is -26.98 kcal/mol, whereas the counterpoise-corrected energy is -22.59 kcal/mol. Noncovalent interaction index (NCI) and quantum theory of atoms in molecules (QTAIM) analyses are performed to obtain insights about the behavior and the types of interactions that occur between B3O3 nanoflake and favipiravir. The results indicate the presence of hydrogen bonding between the hydrogen in the favipiravir and the oxygen in the B3O3 nanoflake in the most stable complex (FAV@B3O3-C1). The electronic properties are investigated through frontier molecular orbital analysis, dipole moments and chemical reactivity descriptors. These parameters showed the significant activity of B3O3 for favipiravir. NBO charge analysis transfer illustrated the charge transfer between the two species, and UV-VIS analysis confirmed the electronic excitation. Our work suggested a suitable drug carrier system for the antiviral drug favipiravir, which can be considered by the experimentalist for better drug delivery systems.
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Affiliation(s)
- Muhammad Nauman Zahid
- Department of Biology, College of Science, University of Bahrain, Sakhir P.O. Box 32038, Bahrain;
| | - Naveen Kosar
- Department of Chemistry, University of Management and Technology (UMT), C-11, Johar Town Lahore, Lahore 54770, Pakistan;
| | - Hasnain Sajid
- School of Science and Technology, Nottingham Trent University, Clifton Lane, Nottingham NG11 8NS, UK;
| | - Khalid Elfaki Ibrahim
- Department of Zoology, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia;
| | - Mansour K. Gatasheh
- Department of Biochemistry, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia;
| | - Tariq Mahmood
- Department of Chemistry, COMSATS University, Abbottabad Campus, Abbottabad 22060, Pakistan
- Department of Chemistry, College of Science, University of Bahrain, Sakhir P.O. Box 32038, Bahrain
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Albrechtsen SH, Schouder CA, Viñas Muñoz A, Christensen JK, Engelbrecht Petersen C, Pi M, Barranco M, Stapelfeldt H. Observing the primary steps of ion solvation in helium droplets. Nature 2023; 623:319-323. [PMID: 37938709 DOI: 10.1038/s41586-023-06593-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Accepted: 08/31/2023] [Indexed: 11/09/2023]
Abstract
Solvation is a ubiquitous phenomenon in the natural sciences. At the macroscopic level, it is well understood through thermodynamics and chemical reaction kinetics1,2. At the atomic level, the primary steps of solvation are the attraction and binding of individual molecules or atoms of a solvent to molecules or ions of a solute1. These steps have, however, never been observed in real time. Here we instantly create a single sodium ion at the surface of a liquid helium nanodroplet3,4, and measure the number of solvent atoms that successively attach to the ion as a function of time. We found that the binding dynamics of the first five helium atoms is well described by a Poissonian process with a binding rate of 2.0 atoms per picosecond. This rate is consistent with time-dependent density-functional-theory simulations of the solvation process. Furthermore, our measurements enable an estimate of the energy removed from the region around the sodium ion as a function of time, revealing that half of the total solvation energy is dissipated after four picoseconds. Our experimental method opens possibilities for benchmarking theoretical models of ion solvation and for time-resolved measurements of cation-molecule complex formation.
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Affiliation(s)
| | - Constant A Schouder
- Department of Chemistry, Aarhus University, Aarhus, Denmark
- Université Paris-Saclay, CEA, CNRS, LIDYL, Gif-sur-Yvette, France
| | | | | | | | - Martí Pi
- Departament FQA, Facultat de Física, Universitat de Barcelona, Barcelona, Spain
- Institute of Nanoscience and Nanotechnology (IN2UB), Universitat de Barcelona, Barcelona, Spain
| | - Manuel Barranco
- Departament FQA, Facultat de Física, Universitat de Barcelona, Barcelona, Spain
- Institute of Nanoscience and Nanotechnology (IN2UB), Universitat de Barcelona, Barcelona, Spain
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Al-Hakim Badawi MA, Al-Zaben MI, Thomas R. DFT Studies on Mechanism of Organocatalytic Metal-Free Click 32CA Reaction for Synthesis of NH-1,2,3-triazoles. Catal Letters 2023. [DOI: 10.1007/s10562-023-04374-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2023] [Accepted: 05/22/2023] [Indexed: 09/02/2023]
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5
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Sumithra M, Sundaraganesan N, Rajesh R, Ilangovan V, Irfan A, Muthu S. Electron density, charge transfer, solvent effect and molecular spectroscopic studies on 2,2-Dimethyl-N-pyridin-4-yl-propionamide – A potential antioxidant. COMPUT THEOR CHEM 2023. [DOI: 10.1016/j.comptc.2023.114103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/30/2023]
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6
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Zunzunegui-Bru E, Gruber E, Lázaro T, Bartolomei M, Hernández MI, Campos-Martínez J, González-Lezana T, Bergmeister S, Zappa F, Scheier P, Pérez de Tudela R, Hernández-Rojas J, Bretón J. Observation of Multiple Ordered Solvation Shells in Doped Helium Droplets: The Case of He NCa 2. J Phys Chem Lett 2023; 14:3126-3131. [PMID: 36952614 PMCID: PMC10084467 DOI: 10.1021/acs.jpclett.3c00224] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
In this Letter, we report the experimental detection of likely the largest ordered structure of helium atoms surrounding a monatomic impurity observed to date using a recently developed technique. The mass spectrometry investigation of HeNCa2+ clusters, formed in multiply charged helium nanodroplets, reveals magic numbers at N = 12, 32, 44, and 74. Classical optimization and path integral Monte Carlo calculations suggest the existence of up to four shells surrounding the calcium dication which are closed with well-ordered Mozartkugel-like structures: He12Ca2+ with an icosahedron, the second at He32Ca2+ with a dodecahedron, the third at He44Ca2+ with a larger icosahedron, and finally for He74Ca2+, we find that the outermost He atoms form an icosidodecahedron which contains the other inner shells. We analyze the reasons for the formation of such ordered shells in order to guide the selection of possible candidates to exhibit a similar behavior.
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Affiliation(s)
- Eva Zunzunegui-Bru
- Instituto de Física Fundamental, IFF-CSIC, Serrano 123, Madrid 28006, Spain
| | - Elisabeth Gruber
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, Innsbruck 6020, Austria
| | - Teresa Lázaro
- Instituto de Física Fundamental, IFF-CSIC, Serrano 123, Madrid 28006, Spain
| | | | - Marta I Hernández
- Instituto de Física Fundamental, IFF-CSIC, Serrano 123, Madrid 28006, Spain
| | | | | | - Stefan Bergmeister
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, Innsbruck 6020, Austria
| | - Fabio Zappa
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, Innsbruck 6020, Austria
| | - Paul Scheier
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, Innsbruck 6020, Austria
| | | | - Javier Hernández-Rojas
- Departamento de Física and IUdEA, Universidad de La Laguna, La Laguna, 38205, Tenerife, Spain
| | - José Bretón
- Departamento de Física and IUdEA, Universidad de La Laguna, La Laguna, 38205, Tenerife, Spain
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Nauman Zahid M, Asif M, Sajid H, Kosar N, Akbar Shahid M, Allangawi A, Ayub K, Azeem M, Mahmood T. Therapeutic efficiency of B3O3 quantum dot as a targeted drug delivery system toward Foscarnet anti-HIV drug. COMPUT THEOR CHEM 2023. [DOI: 10.1016/j.comptc.2023.114107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/31/2023]
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8
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Kollotzek S, Campos-Martínez J, Bartolomei M, Pirani F, Tiefenthaler L, Hernández MI, Lázaro T, Zunzunegui-Bru E, González-Lezana T, Bretón J, Hernández-Rojas J, Echt O, Scheier P. Helium nanodroplets as an efficient tool to investigate hydrogen attachment to alkali cations. Phys Chem Chem Phys 2022; 25:462-470. [PMID: 36477158 PMCID: PMC9768848 DOI: 10.1039/d2cp03841b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2022] [Accepted: 11/16/2022] [Indexed: 11/18/2022]
Abstract
We report a novel method to reversibly attach and detach hydrogen molecules to positively charged sodium clusters formed inside a helium nanodroplet host matrix. It is based on the controlled production of multiply charged helium droplets which, after picking up sodium atoms and exposure to H2 vapor, lead to the formation of Nam+(H2)n clusters, whose population was accurately measured using a time-of-flight mass spectrometer. The mass spectra reveal particularly favorable Na+(H2)n and Na2+(H2)n clusters for specific "magic" numbers of attached hydrogen molecules. The energies and structures of these clusters have been investigated by means of quantum-mechanical calculations employing analytical interaction potentials based on ab initio electronic structure calculations. A good agreement is found between the experimental and the theoretical magic numbers.
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Affiliation(s)
- Siegfried Kollotzek
- University of Innsbruck, Institute for Ion Physics and Applied Physics, Innsbruck, Austria.
| | | | | | - Fernando Pirani
- Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Perugia, Italy
| | - Lukas Tiefenthaler
- University of Innsbruck, Institute for Ion Physics and Applied Physics, Innsbruck, Austria.
| | | | - Teresa Lázaro
- Instituto de Física Fundamental, C.S.I.C., Madrid, Spain.
| | | | | | - José Bretón
- Departamento de Física and IUdEA, Universidad de La Laguna, La Laguna, Tenerife, Spain
| | | | - Olof Echt
- University of Innsbruck, Institute for Ion Physics and Applied Physics, Innsbruck, Austria.
- Department of Physics, University of New Hampshire, Durham, NH 03824, USA
| | - Paul Scheier
- University of Innsbruck, Institute for Ion Physics and Applied Physics, Innsbruck, Austria.
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9
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Geethapriya J, Shanthidevi A, Arivazhagan M, Elangovan N, Sowrirajan S, Manivel S, Thomas R. Synthesis, characterization, computational, excited state properties, wave function and molecular docking studies of (E)-1-(perfluorophenyl)-N-(p-tolyl) methanimine. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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10
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Structural vibrational analysis (FT-IR, FT-Raman), electronic studies based on solvents (UV–Vis, non-linear optics, frontier molecular orbitals, molecular electrostatic potential, natural bond orbital and Fukui evaluation) and Hirshfeld surface analysis on 4-chloroacetophenone. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100871] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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11
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Ganesan TS, Elangovan N, Vanmathi V, Sowrirajan S, Chandrasekar S, Murthy KS, Thomas R. Spectroscopic, Computational(DFT), Quantum mechanical studies and protein-ligand interaction of Schiff base 6,6-((1,2-phenylenebis(azaneylylidene))bis(methaneylylidene))bis(2-methoxyphenol) from o-phenylenediamine and 3- methoxysalicylaldehyde. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100713] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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12
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Vennila M, Rathikha R, Muthu S, Jeelani A, Irfan A. Structural, spectral inspection, electronic properties in different solvents, Fukui functions, 6-acetyl-2H-1,4-benzoxazin-3(4H)-one – Multiple sclerosis and auto immune disorders therapeutics. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.119248] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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13
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Louis H, Mathias GE, Ikenyirimba OJ, Unimuke TO, Etiese D, Adeyinka AS. Metal-Doped Al 12N 12X (X = Na, Mg, K) Nanoclusters as Nanosensors for Carboplatin: Insight from First-Principles Computation. J Phys Chem B 2022; 126:5066-5080. [PMID: 35786897 DOI: 10.1021/acs.jpcb.2c03671] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
This theoretical study focuses on the adsorption, reactivity, topological analysis, and sensing behavior of metal-doped (K, Na, and Mg) aluminum nitride (Al12N12) nanoclusters using the first-principle density functional theory (DFT). All quantum chemical reactivity, natural bond orbital (NBO), free energies (ΔG, ΔH), and sensor parameters were investigated using the ωB97XD functional with the 6-311++G(d,p) basis set. The trapping of carboplatin (cbp) onto the surfaces of doped Al12N12 was studied using four functionals PBE0-D3, M062X-D3, ωB97XD, and B3LYP-D3 at the 6-311++G(d,p) basis set. Overall, the substantial change in the energy gap of the surfaces after the adsorption process affects the work function, field emission, and the electrical conductivity of the doped clusters, hence making the studied surfaces a better sensor material for detecting carboplatin. Higher free energies of solvation were obtained in polar solvents compared to nonpolar solvents. Moreover, negative solvation energies and adsorption energies were obtained, which therefore shows that the engineered surfaces are highly efficient in trapping carboplatin. The relatively strong adsorption energies show that the mechanism of adsorption is by chemisorption, and K- and Na-doped metal clusters acted as better sensors for carboplatin. Also, the topological analysis in comparison to previous studies shows that the nanoclusters exhibited very high stability with regard to their relevant binding energies and hydrogen bond interactions.
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Affiliation(s)
- Hitler Louis
- Computational and Bio-Simulation Research Group, University of Calabar, Calabar P.M.B 1115, Nigeria
- Department of Pure and Applied Chemistry, Faculty of Physical Sciences, University of Calabar, Calabar P.M.B 1115, Nigeria
| | - Gideon E Mathias
- Computational and Bio-Simulation Research Group, University of Calabar, Calabar P.M.B 1115, Nigeria
- Department of Pure and Applied Chemistry, Faculty of Physical Sciences, University of Calabar, Calabar P.M.B 1115, Nigeria
| | - Onyinye J Ikenyirimba
- Computational and Bio-Simulation Research Group, University of Calabar, Calabar P.M.B 1115, Nigeria
- Department of Chemistry Education, Alex Ekwueme Federal University, Ebonyi State, Abakaliki P.M.B 1010, Nigeria
| | - Tomsmith O Unimuke
- Computational and Bio-Simulation Research Group, University of Calabar, Calabar P.M.B 1115, Nigeria
- Department of Pure and Applied Chemistry, Faculty of Physical Sciences, University of Calabar, Calabar P.M.B 1115, Nigeria
| | - Daniel Etiese
- Computational and Bio-Simulation Research Group, University of Calabar, Calabar P.M.B 1115, Nigeria
- Department of Pure and Applied Chemistry, Faculty of Physical Sciences, University of Calabar, Calabar P.M.B 1115, Nigeria
| | - Adedapo S Adeyinka
- Department of Chemical Sciences, University of Johannesburg, Johannesburg 2006, South Africa
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Rock CA, Arradondo SN, Tschumper GS. Solvation of Isoelectronic Halide and Alkali Metal Ions by Argon Atoms. J Phys Chem A 2021; 125:10524-10531. [PMID: 34851634 DOI: 10.1021/acs.jpca.1c08069] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
This work systematically examines the interactions of alkali metal cations and their isoelectronic halide counterparts with up to six solvating Ar atoms (M+Arn and X-Arn, where M = Li, Na, K, and Rb; X = H, F, Cl, and Br; and n = 1-6) via full geometry optimizations with the MP2 method and robust, correlation-consistent quadruple-ζ (QZ) basis sets. 116 unique M+Arn and X-Arn stationary points have been characterized on the MP2/QZ potential energy surface. To the best of our knowledge, approximately two dozen of these stationary points have been reported here for the first time. Some of these new structures are either the lowest-energy stationary point for a particular cluster or energetically competitive with it. The CCSD(T) method was employed to perform additional single-point energy computations upon all MP2/QZ-optimized structures using the same basis set. CCSD(T)/QZ results indicate that internally solvated structures with the ion at/near the geometric center of the cluster have appreciably higher energies than those placing the ion on the periphery. While this study extends the prior investigations of M+Arn clusters found within the literature, it notably provides one of the first thorough characterizations of and comparisons to the corresponding negatively charged X-Arn clusters.
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Affiliation(s)
- Carly A Rock
- Department of Chemistry and Biochemistry, University of Mississippi, University, Mississippi 38677-1848, United States
| | - Sarah N Arradondo
- Department of Chemistry, Washington College, Chestertown, Maryland 21620-1438, United States
| | - Gregory S Tschumper
- Department of Chemistry and Biochemistry, University of Mississippi, University, Mississippi 38677-1848, United States
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Brieuc F, Schran C, Uhl F, Forbert H, Marx D. Converged quantum simulations of reactive solutes in superfluid helium: The Bochum perspective. J Chem Phys 2020; 152:210901. [DOI: 10.1063/5.0008309] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Affiliation(s)
- Fabien Brieuc
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, 44780 Bochum, Germany
| | - Christoph Schran
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, 44780 Bochum, Germany
| | - Felix Uhl
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, 44780 Bochum, Germany
| | - Harald Forbert
- Center for Solvation Science ZEMOS, Ruhr-Universität Bochum, 44780 Bochum, Germany
| | - Dominik Marx
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, 44780 Bochum, Germany
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16
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Solvation of lithium ion in helium clusters: Structural properties and relative stabilities. J Mol Graph Model 2020; 98:107582. [PMID: 32200277 DOI: 10.1016/j.jmgm.2020.107582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Revised: 03/06/2020] [Accepted: 03/09/2020] [Indexed: 01/18/2023]
Abstract
Structural study and relative stabilities of Li+-doped helium clusters Li+Hen (n = 1-18) has been reported in this work using two theoretical protocols. The first one is based on the basin-hopping optimization technique, where the total energy of each cluster is described by an additive model describing Li+-He and He-He interactions. The second one is the DFT calculations, in which the initial structures are generated by ABCluster algorithm and CALYPSO software. The CSA shape was found where the first solvation shell is completed at n = 10. The relative stabilities of Li+Hen (n = 1-18) clusters have been discussed based on the variation of the binding energy, second-order difference in energy, fragmentation energy and HOMO-LUMO energy gap as a function of the cluster size. The results showed that Li+He10 is the most stable cluster. The dipole moment is calculated and showed the polar character of the Li+Hen clusters. Finally, the interatomic interactions have been examined topologically by the means of AIM and non-covalent reduced density gradient (NC-RDG) analyses.
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17
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Laajimi M, Mtiri S, Ghalla H. Structure and stability of sodium-doped helium snowballs through DFT calculations. Theor Chem Acc 2020. [DOI: 10.1007/s00214-020-2556-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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18
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Ben Hadj Ayed M, Osmani T, Issaoui N, Berisha A, Oujia B, Ghalla H. Structures and relative stabilities of Na+Nen (n = 1–16) clusters via pairwise and DFT calculations. Theor Chem Acc 2019. [DOI: 10.1007/s00214-019-2476-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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19
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Pérez de Tudela R, Martini P, Goulart M, Scheier P, Pirani F, Hernández-Rojas J, Bretón J, Ortiz de Zárate J, Bartolomei M, González-Lezana T, Hernández MI, Campos-Martínez J, Villarreal P. A combined experimental and theoretical investigation of Cs + ions solvated in He N clusters. J Chem Phys 2019; 150:154304. [PMID: 31005067 DOI: 10.1063/1.5092566] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Abstract
Solvation of Cs+ ions inside helium droplets has been investigated both experimentally and theoretically. On the one hand, mass spectra of doped helium clusters ionized with a crossed electron beam, HeNCs+, have been recorded for sizes up to N = 60. The analysis of the ratio between the observed peaks for each size N reveals evidences of the closure of the first solvation shell when 17 He atoms surround the alkali ion. On the other hand, we have obtained energies and geometrical structures of the title clusters by means of basin-hopping, diffusion Monte Carlo (DMC), and path integral Monte Carlo (PIMC) methods. The analytical He-Cs+ interaction potential employed in our calculations is represented by the improved Lennard-Jones expression optimized on high level ab initio energies. The weakness of the existing interaction between helium and Cs+ in comparison with some other alkali ions such as Li+ is found to play a crucial role. Our theoretical findings confirm that the first solvation layer is completed at N = 17 and both evaporation and second difference energies obtained with the PIMC calculation seem to reproduce a feature observed at N = 12 for the experimental ion abundance. The analysis of the DMC probability distributions reveals the important contribution from the icosahedral structure to the overall configuration for He12Cs+.
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Affiliation(s)
| | - Paul Martini
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstr. 25, A-6020 Innsbruck, Austria
| | - Marcelo Goulart
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstr. 25, A-6020 Innsbruck, Austria
| | - Paul Scheier
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstr. 25, A-6020 Innsbruck, Austria
| | - Fernando Pirani
- Dipartimento di Chimica, Biologia e Biotecnologie, Universitá di Perugia, 06123 Perugia, Italy
| | - Javier Hernández-Rojas
- Departamento de Física and IUdEA, Universidad de La Laguna, La Laguna, 38205 Tenerife, Spain
| | - José Bretón
- Departamento de Física and IUdEA, Universidad de La Laguna, La Laguna, 38205 Tenerife, Spain
| | | | | | | | - Marta I Hernández
- Instituto de Física Fundamental, IFF-CSIC, Serrano 123, 28006 Madrid, Spain
| | | | - Pablo Villarreal
- Instituto de Física Fundamental, IFF-CSIC, Serrano 123, 28006 Madrid, Spain
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Spectroscopic, vibrational and structural properties analysis of CaXen (n = 1–4) clusters. COMPUT THEOR CHEM 2019. [DOI: 10.1016/j.comptc.2019.02.006] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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21
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Ortiz de Zárate J, Bartolomei M, González-Lezana T, Campos-Martínez J, Hernández MI, Pérez de Tudela R, Hernández-Rojas J, Bretón J, Pirani F, Kranabetter L, Martini P, Kuhn M, Laimer F, Scheier P. Snowball formation for Cs + solvation in molecular hydrogen and deuterium. Phys Chem Chem Phys 2019; 21:15662-15668. [PMID: 31271179 DOI: 10.1039/c9cp02017a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Interactions of atomic cations with molecular hydrogen are of interest for a wide range of applications in hydrogen technologies. These interactions are fairly strong despite being non-covalent, hence one can ask whether hydrogen molecules would form dense, solid-like, solvation shells around the ion (snowballs) or rather a more weakly bound compound. In this work, the interactions between Cs+ and H2 are studied both experimentally and computationally. Isotopic substitution of H2 by D2 is also investigated. On the one hand, helium nanodroplets doped with cesium and hydrogen or deuterium are ionized by electron impact and the (H2/D2)nCs+ (up to n = 30) clusters formed are identified via mass spectrometry. On the other hand, a new analytical potential energy surface, based on ab initio calculations, is developed and used to study cluster energies and structures by means of classical and quantum-mechanical Monte Carlo methods. The most salient features of the measured ion abundances are remarkably mimicked by the computed evaporation energies, particularly for the clusters composed of deuterium. This result supports the reliability of the present potential energy surface and allows us to recommend its use in related systems. Clusters with either twelve H2 or D2 molecules stand out for their stability and quasi-rigid icosahedral structures. However, the first solvation shell involves thirteen or fourteen molecules for hydrogenated or deuterated clusters, respectively. This shell retains its internal structure when extra molecules are added to the second shell and is nearly solid-like, especially for the deuterated clusters. The role played by three-body induction interactions as well as the rotational degrees of freedom is analyzed and they are found to be significant (up to 15% and 18%, respectively) for the molecules belonging to the first solvation shell.
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Affiliation(s)
- Josu Ortiz de Zárate
- Instituto de Física Fundamental, Consejo Superior de Investigaciones Científicas (IFF-CSIC), Serrano 123, 28006 Madrid, Spain.
| | - Massimiliano Bartolomei
- Instituto de Física Fundamental, Consejo Superior de Investigaciones Científicas (IFF-CSIC), Serrano 123, 28006 Madrid, Spain.
| | - Tomás González-Lezana
- Instituto de Física Fundamental, Consejo Superior de Investigaciones Científicas (IFF-CSIC), Serrano 123, 28006 Madrid, Spain.
| | - José Campos-Martínez
- Instituto de Física Fundamental, Consejo Superior de Investigaciones Científicas (IFF-CSIC), Serrano 123, 28006 Madrid, Spain.
| | - Marta I Hernández
- Instituto de Física Fundamental, Consejo Superior de Investigaciones Científicas (IFF-CSIC), Serrano 123, 28006 Madrid, Spain.
| | | | - Javier Hernández-Rojas
- Departamento de Fsica and IUdEA, Universidad de La Laguna, 38205, La Laguna, Tenerife, Spain
| | - José Bretón
- Departamento de Fsica and IUdEA, Universidad de La Laguna, 38205, La Laguna, Tenerife, Spain
| | - Fernando Pirani
- Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Perugia, Italy
| | - Lorenz Kranabetter
- Universität Innsbruck, Institut für Ionenphyisk und Angewandte Physik, Technikerstraße 25, 6020 Innsbruck, Austria
| | - Paul Martini
- Universität Innsbruck, Institut für Ionenphyisk und Angewandte Physik, Technikerstraße 25, 6020 Innsbruck, Austria
| | - Martin Kuhn
- Universität Innsbruck, Institut für Ionenphyisk und Angewandte Physik, Technikerstraße 25, 6020 Innsbruck, Austria
| | - Felix Laimer
- Universität Innsbruck, Institut für Ionenphyisk und Angewandte Physik, Technikerstraße 25, 6020 Innsbruck, Austria
| | - Paul Scheier
- Universität Innsbruck, Institut für Ionenphyisk und Angewandte Physik, Technikerstraße 25, 6020 Innsbruck, Austria
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22
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Rastogi M, Leidlmair C, An der Lan L, Ortiz de Zárate J, Pérez de Tudela R, Bartolomei M, Hernández MI, Campos-Martínez J, González-Lezana T, Hernández-Rojas J, Bretón J, Scheier P, Gatchell M. Lithium ions solvated in helium. Phys Chem Chem Phys 2018; 20:25569-25576. [PMID: 30112553 PMCID: PMC6194493 DOI: 10.1039/c8cp04522d] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Accepted: 08/08/2018] [Indexed: 01/18/2023]
Abstract
We report on a combined experimental and theoretical study of Li+ ions solvated by up to 50 He atoms. The experiments show clear enhanced abundances associated with HenLi+ clusters where n = 2, 6, 8, and 14. We find that classical methods, e.g. basin-hopping (BH), give results that qualitatively agree with quantum mechanical methods such as path integral Monte Carlo, diffusion Monte Carlo and quantum free energy, regarding both energies and the solvation structures that are formed. The theory identifies particularly stable structures for n = 4, 6 and 8 which line up with some of the most abundant features in the experiments.
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Affiliation(s)
- Monisha Rastogi
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstr. 25
,
A-6020 Innsbruck
, Austria
.
| | - Christian Leidlmair
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstr. 25
,
A-6020 Innsbruck
, Austria
.
| | - Lukas An der Lan
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstr. 25
,
A-6020 Innsbruck
, Austria
.
| | - Josu Ortiz de Zárate
- Instituto de Física Fundamental, IFF-CSIC
, Serrano 123
,
28006 Madrid
, Spain
.
| | | | | | - Marta I. Hernández
- Instituto de Física Fundamental, IFF-CSIC
, Serrano 123
,
28006 Madrid
, Spain
.
| | - José Campos-Martínez
- Instituto de Física Fundamental, IFF-CSIC
, Serrano 123
,
28006 Madrid
, Spain
.
| | | | | | - José Bretón
- Departamento de Física and IUdEA, Universidad de La Laguna
,
38205 Tenerife
, Spain
| | - Paul Scheier
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstr. 25
,
A-6020 Innsbruck
, Austria
.
| | - Michael Gatchell
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstr. 25
,
A-6020 Innsbruck
, Austria
.
- Department of Physics, Stockholm University
,
106 91 Stockholm
, Sweden
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23
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Uhl F, Marx D. Helium Tagging of Protonated Methane in Messenger Spectroscopy: Does It Interfere with the Fluxionality of CH5
+
? Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201808531] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Felix Uhl
- Lehrstuhl für Theoretische Chemie; Ruhr-Universität Bochum; 44780 Bochum Germany
| | - Dominik Marx
- Lehrstuhl für Theoretische Chemie; Ruhr-Universität Bochum; 44780 Bochum Germany
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24
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Uhl F, Marx D. Helium Tagging of Protonated Methane in Messenger Spectroscopy: Does It Interfere with the Fluxionality of CH5
+
? Angew Chem Int Ed Engl 2018; 57:14792-14795. [DOI: 10.1002/anie.201808531] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Indexed: 01/18/2023]
Affiliation(s)
- Felix Uhl
- Lehrstuhl für Theoretische Chemie; Ruhr-Universität Bochum; 44780 Bochum Germany
| | - Dominik Marx
- Lehrstuhl für Theoretische Chemie; Ruhr-Universität Bochum; 44780 Bochum Germany
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25
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Calvo F, Yurtsever E. The quantum structure of anionic hydrogen clusters. J Chem Phys 2018; 148:102305. [DOI: 10.1063/1.4990612] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Affiliation(s)
- F. Calvo
- University Grenoble Alpes, LIPHY, F-38000 Grenoble, France and CNRS, LIPHY, F-38000 Grenoble, France
| | - E. Yurtsever
- Koç University, Rumelifeneriyolu, Sariyer, Istanbul 34450, Turkey
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26
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Ancilotto F, Barranco M, Coppens F, Eloranta J, Halberstadt N, Hernando A, Mateo D, Pi M. Density functional theory of doped superfluid liquid helium and nanodroplets. INT REV PHYS CHEM 2017. [DOI: 10.1080/0144235x.2017.1351672] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Francesco Ancilotto
- Dipartimento di Fisica e Astronomia ‘Galileo Galilei’ and CNISM, Università di Padova, Padova, Italy
- CNR-IOM Democritos, Trieste, Italy
| | - Manuel Barranco
- Facultat de Física, Departament FQA, Universitat de Barcelona, Barcelona, Spain
- Institute of Nanoscience and Nanotechnology (IN2UB), Universitat de Barcelona, Barcelona, Spain
- Laboratoire des Collisions, Agrégats et Réactivité, IRSAMC, Université Toulouse 3 and CNRS, Toulouse Cedex 09, France
| | - François Coppens
- Laboratoire des Collisions, Agrégats et Réactivité, IRSAMC, Université Toulouse 3 and CNRS, Toulouse Cedex 09, France
| | - Jussi Eloranta
- Department of Chemistry and Biochemistry, California State University at Northridge, Northridge, CA, USA
| | - Nadine Halberstadt
- Laboratoire des Collisions, Agrégats et Réactivité, IRSAMC, Université Toulouse 3 and CNRS, Toulouse Cedex 09, France
| | - Alberto Hernando
- Social Thermodynamics Applied Research (SThAR), EPFL Innovation Park, Lausanne, Switzerland
| | - David Mateo
- Applied Complexity Group, Singapore University of Technology and Design, Singapore, Singapore
| | - Martí Pi
- Facultat de Física, Departament FQA, Universitat de Barcelona, Barcelona, Spain
- Institute of Nanoscience and Nanotechnology (IN2UB), Universitat de Barcelona, Barcelona, Spain
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27
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Low-lying Pt n cluster structures (n = 6–10) from global optimizations based on DFT potential energy surfaces: Sensitivity of the chemical ordering with the functional. COMPUT THEOR CHEM 2017. [DOI: 10.1016/j.comptc.2017.02.010] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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28
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Leal A, Zhang X, Barranco M, Cargnoni F, Hernando A, Mateo D, Mella M, Drabbels M, Pi M. Dynamics of photoexcited Ba(+) cations in (4)He nanodroplets. J Chem Phys 2016; 144:094302. [PMID: 26957164 DOI: 10.1063/1.4942850] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Abstract
We present a joint experimental and theoretical study on the desolvation of Ba(+) cations in (4)He nanodroplets excited via the 6p ← 6s transition. The experiments reveal an efficient desolvation process yielding mainly bare Ba(+) cations and Ba(+)Hen exciplexes with n = 1 and 2. The speed distributions of the ions are well described by Maxwell-Boltzmann distributions with temperatures ranging from 60 to 178 K depending on the excitation frequency and Ba(+) Hen exciplex size. These results have been analyzed by calculations based on a time-dependent density functional description for the helium droplet combined with classical dynamics for the Ba(+). In agreement with experiment, the calculations reveal the dynamical formation of exciplexes following excitation of the Ba(+) cation. In contrast to experimental observation, the calculations do not reveal desolvation of excited Ba(+) cations or exciplexes, even when relaxation pathways to lower lying states are included.
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Affiliation(s)
- Antonio Leal
- Departament ECM, Facultat de Física, and INUB, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain
| | - Xiaohang Zhang
- Laboratoire de Chimie Physique Moléculaire, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015 Lausanne, Switzerland
| | - Manuel Barranco
- Departament ECM, Facultat de Física, and INUB, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain
| | - Fausto Cargnoni
- Istituto di Scienze e Tecnologie Molecolari (ISTM), Consiglio Nazionale delle Ricerche, via Golgi 19, 20133 Milano, Italy
| | - Alberto Hernando
- Social Thermodynamics Applied Research (SThAR), EPFL Innovation Park, Bâtiment C, CH-1015 Lausanne, Switzerland
| | - David Mateo
- Department of Chemistry and Biochemistry, California State University at Northridge, Northridge, California 91330, USA
| | - Massimo Mella
- Dipartimento di Scienza ed Alta Tecnologia, Università degli Studi dell'Insubria, via Valleggio 11, 22100 Como, Italy
| | - Marcel Drabbels
- Laboratoire de Chimie Physique Moléculaire, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015 Lausanne, Switzerland
| | - Martí Pi
- Departament ECM, Facultat de Física, and INUB, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain
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29
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Jedidi A, Li R, Fornasiero P, Cavallo L, Carbonniere P. Vibrational Fingerprints of Low-Lying Pt(n)P(2n) (n = 1-5) Cluster Structures from Global Optimization Based on Density Functional Theory Potential Energy Surfaces. J Phys Chem A 2015; 119:11711-8. [PMID: 26566005 DOI: 10.1021/acs.jpca.5b08495] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Vibrational fingerprints of small Pt(n)P(2n) (n = 1-5) clusters were computed from their low-lying structures located from a global exploration of their DFT potential energy surfaces with the GSAM code. Five DFT methods were assessed from the CCSD(T) wavenumbers of PtP2 species and CCSD relative energies of Pt2P4 structures. The eight first Pt(n)P(2n) isomers found are reported. The vibrational computations reveal (i) the absence of clear signatures made by overtone or combination bands due to very weak mechanical and electrical anharmonicities and (ii) some significant and recurrent vibrational fingerprints in correlation with the different PP bonding situations in the Pt(n)P(2n) structures.
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Affiliation(s)
- Abdesslem Jedidi
- Division of Physical Sciences and Engineering, KAUST Catalysis Center, King Abdullah University of Science and Technology (KAUST) , 4700 KAUST, Thuwal 23955-6900, Saudi Arabia
| | - Rui Li
- Groupe de Chimie Théorique et Réactivité, IPREM/ECP UMR CNRS 5254, Université de Pau et des Pays de l'Adour , F-64000 Pau, France
| | - Paolo Fornasiero
- Department of Chemical and Pharmaceutical Sciences, INSTM, ICCOM-CNR, University of Trieste , Via L. Giorgieri 1, 34127 Trieste, Italy
| | - Luigi Cavallo
- Division of Physical Sciences and Engineering, KAUST Catalysis Center, King Abdullah University of Science and Technology (KAUST) , 4700 KAUST, Thuwal 23955-6900, Saudi Arabia
| | - Philippe Carbonniere
- Groupe de Chimie Théorique et Réactivité, IPREM/ECP UMR CNRS 5254, Université de Pau et des Pays de l'Adour , F-64000 Pau, France
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30
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Calvo F. Coating Polycyclic Aromatic Hydrocarbon Cations with Helium Clusters: Snowballs and Slush. J Phys Chem A 2014; 119:5959-70. [DOI: 10.1021/jp510799h] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Florent Calvo
- University of Grenoble Alpes, LIPHY, F-38000 Grenoble, France and
- CNRS, LIPHY, F-38000 Grenoble, France
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