1
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Raju D, Ramdin M, Vlugt TJH. Thermophysical Properties and Phase Behavior of CO 2 with Impurities: Insight from Molecular Simulations. JOURNAL OF CHEMICAL AND ENGINEERING DATA 2024; 69:2735-2755. [PMID: 39139986 PMCID: PMC11318637 DOI: 10.1021/acs.jced.4c00268] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/13/2024] [Revised: 06/19/2024] [Accepted: 07/02/2024] [Indexed: 08/15/2024]
Abstract
Experimentally determining thermophysical properties for various compositions commonly found in CO2 transportation systems is extremely challenging. To overcome this challenge, we performed Monte Carlo (MC) and Molecular Dynamics (MD) simulations of CO2 rich mixtures to compute thermophysical properties such as densities, thermal expansion coefficients, isothermal compressibilities, heat capacities, Joule-Thomson coefficients, speed of sound, and viscosities at temperatures of (235-313) K and pressures of (20-200) bar. We computed thermophysical properties of pure CO2 and CO2 rich mixtures with N2, Ar, H2, and CH4 as impurities of (1-10) mol % and showed good agreement with available Equations of State (EoS). We showed that impurities decrease the values of thermal expansion coefficients, isothermal compressibilities, heat capacities, and Joule-Thomson coefficients in the gas phase, while these values increase in the liquid and supercritical phases. In contrast, impurities increase the value of speed of sound in the gas phase and decrease it in the liquid and supercritical phases. We present an extensive data set of thermophysical properties for CO2 rich mixtures with various impurities, which will help to design the safe and efficient operation of CO2 transportation systems.
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Affiliation(s)
- D. Raju
- Engineering Thermodynamics, Process & Energy Department, Faculty of
Mechanical Engineering, Delft University of Technology,
Leeghwaterstraat 39, Delft 2628CB, The Netherlands
| | - M. Ramdin
- Engineering Thermodynamics, Process & Energy Department, Faculty of
Mechanical Engineering, Delft University of Technology,
Leeghwaterstraat 39, Delft 2628CB, The Netherlands
| | - T. J. H. Vlugt
- Engineering Thermodynamics, Process & Energy Department, Faculty of
Mechanical Engineering, Delft University of Technology,
Leeghwaterstraat 39, Delft 2628CB, The Netherlands
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2
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Khot A, Lindsey RK, Lewicki JP, Maiti A, Goldman N, Kroonblawd MP. United atom and coarse grained models for crosslinked polydimethylsiloxane with applications to the rheology of silicone fluids. Phys Chem Chem Phys 2023; 25:9669-9684. [PMID: 36943730 DOI: 10.1039/d2cp04920a] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2023]
Abstract
Siloxane systems consisting primarily of polydimethylsiloxane (PDMS) are versatile, multifaceted materials that play a key role in diverse applications. However, open questions exist regarding the correlation between their varied atomic-level properties and observed macroscale features. To this effect, we have created a systematic workflow to determine coarse-grained simulation models for crosslinked PDMS in order to further elucidate the effects of network changes on the system's rheological properties below the gel point. Our approach leverages a fine-grained united atom model for linear PDMS, which we extend to include crosslinking terms, and applies iterative Boltzmann inversion to obtain a coarse-grain "bead-spring-type" model. We then perform extensive molecular dynamics simulations to explore the effect of crosslinking on the rheology of silicone fluids, where we compute systematic increases in both density and shear viscosity that compare favorably to experiments that we conduct here. The kinematic viscosity of partially crosslinked fluids follows an empirical linear relationship that is surprisingly consistent with Rouse theory, which was originally derived for systems comprised of a uniform distribution of linear chains. The models developed here serve to enable quantitative bottom-up predictions for curing- and age-induced effects on macroscale rheological properties, allowing for accurate prediction of material properties based on fundamental chemical data.
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Affiliation(s)
- Aditi Khot
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA.
- Department of Chemical Engineering, Purdue University, West Lafayette, Indiana 47907, USA
| | - Rebecca K Lindsey
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA.
- Department of Chemical Engineering, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - James P Lewicki
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA.
| | - Amitesh Maiti
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA.
| | - Nir Goldman
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA.
- Department of Chemical Engineering, University of California, Davis, California 95616, USA
| | - Matthew P Kroonblawd
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA.
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3
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Harini M, Bhattacharjee S, Adhikari J. Vapour–liquid coexistence of natural phenolic monoterpenoid, thymol: comparison with structural isomer, carvacrol. Mol Phys 2022. [DOI: 10.1080/00268976.2022.2067088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Madakashira Harini
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Mumbai, India
| | - Suryadip Bhattacharjee
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Mumbai, India
| | - Jhumpa Adhikari
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Mumbai, India
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4
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Affiliation(s)
- Suryadip Bhattacharjee
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Mumbai, India
| | - Jhumpa Adhikari
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Mumbai, India
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5
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Granados-Bazán EL, Quiñones-Cisneros SE, Deiters UK. Interfacial properties of binary mixtures of Lennard-Jones chains in planar interfaces by molecular dynamics simulation. J Chem Phys 2021; 154:084704. [PMID: 33639748 DOI: 10.1063/5.0042340] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
Binary mixtures of fully flexible linear tangent chains composed of bonded Lennard-Jones interaction sites (monomers) were studied using the molecular dynamics simulation in the NVT ensemble. Their interfacial properties were investigated in planar interfaces by direct simulation of an explicit liquid film in equilibrium with its vapor. A method for the calculation of long-range interactions in inhomogeneous fluids was implemented to take into account the potential truncation effects. Surface tension and the pressure tensor were calculated via the classical Irving-Kirkwood method; vapor pressure, orthobaric densities, density profiles, and Gibbs relative adsorption of the volatile component with respect to the heavy component were also obtained. The properties were studied as a function of the temperature, molar concentration of the heavy component, and the asymmetry of the mixture. According to the results of this work, the temperature loses influence on the surface tension, vapor pressure, and Gibbs relative adsorption curves as the molecular length of the heavy component increases. This suggests that the universal behavior observed in pure fluids of Lennard-Jones chains also holds for binary mixtures. The contribution of the long-range interactions turned out to account for about 60%, 20%, and 10% of the surface tension, vapor pressure, and orthobaric density final values, respectively. This contribution was even larger at high temperatures and for large molecules. Strong enrichment of the volatile component at the interface was observed in the asymmetric mixtures. One of these mixtures even showed a barotropic effect at elevated pressures and a class III phase behavior.
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Affiliation(s)
- Eder L Granados-Bazán
- Institute of Physical Chemistry, University of Cologne, Luxemburger Str. 116, 50939 Köln, Germany
| | - Sergio E Quiñones-Cisneros
- Institute of Thermo- and Fluid Dynamics, Ruhr-University Bochum, Universitätsstr. 150, 44801 Bochum, Germany
| | - Ulrich K Deiters
- Institute of Physical Chemistry, University of Cologne, Luxemburger Str. 116, 50939 Köln, Germany
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6
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Cea-Klapp E, Míguez JM, Gómez-Álvarez P, Blas FJ, Quinteros-Lama H, Garrido JM. Molecular modelling techniques for predicting liquid-liquid interfacial properties of methanol plus alkane ( n-hexane, n-heptane, n-octane) mixtures. Phys Chem Chem Phys 2020; 22:27121-27133. [PMID: 33225339 DOI: 10.1039/d0cp04823b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this work, the liquid-liquid interfacial properties of methanol plus n-alkane (n-hexane, n-heptane, n-octane) mixtures are investigated at atmospheric pressure by two complementary molecular modelling techniques; namely, molecular dynamic simulations (MD) and density gradient theory (DGT) coupled with the PC-SAFT (perturbed-chain statistical associating fluid theory) equation of state. Furthermore, two molecular models of methanol are used, which are based on a non-polarisable three site approach. On the one hand, is the original (flexible) TraPPE-UA model force field. On the other hand, is the rigid approximation denoted as OPLS/2016. In both cases, n-alkanes are modelled using the TraPPE-UA model. Simulations are performed using the direct coexistence technique in the ensemble. Special attention is paid to the comparison between the estimations obtained from different methanol models, the available experimental data and theoretical calculations. In all cases, the rigid model is capable of predicting the experimental phase equilibrium and interfacial properties accurately. Unsurprisingly, the methanol-rich density and interfacial tension are overestimated using the TraPPE model combined with Lorentz-Berthelot mixing rules for predicting the mixture behaviour. Accurate comparison between MD and DGT plus PC-SAFT requires consideration of the cross-interactions between individual influence parameters and fitting the βij values. This latter aspect is particularly important because it allows the exploitation of the link between the EOS model and the direct molecular simulation of the corresponding fluid. At the same time, it was demonstrated that the key property defining the interfacial tension value is the absolute concentration of methanol in the methanol-rich phase. This behaviour indicates that there are more hydrogens bonded with each other, and they interact favourably with an increasing number of carbon atoms in the alkane.
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Affiliation(s)
- Esteban Cea-Klapp
- Department of Chemical Engineering, Universidad de Concepción, Concepción 4070386, Chile.
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7
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Sadus RJ. Combining intermolecular potentials for the prediction of fluid properties: Two-body and three-body interactions. J Chem Phys 2020; 153:214509. [DOI: 10.1063/5.0033466] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Richard J. Sadus
- Centre for Computational Innovations, Swinburne University of Technology, P.O. Box 218, Hawthorn, Victoria 3122, Australia
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8
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Rahbari A, Hens R, Ramdin M, Moultos OA, Dubbeldam D, Vlugt TJH. Recent advances in the continuous fractional component Monte Carlo methodology. MOLECULAR SIMULATION 2020. [DOI: 10.1080/08927022.2020.1828585] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- A. Rahbari
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft University of Technology, Delft, Netherlands
| | - R. Hens
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft University of Technology, Delft, Netherlands
| | - M. Ramdin
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft University of Technology, Delft, Netherlands
| | - O. A. Moultos
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft University of Technology, Delft, Netherlands
| | - D. Dubbeldam
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam, Netherlands
| | - T. J. H. Vlugt
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft University of Technology, Delft, Netherlands
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9
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Kumari B, Bandyopadhyay P, Sarkar SK. Optimising the parameters of the Gibbs Ensemble Monte Carlo simulation of phase separation: the role of multiple relaxation times. MOLECULAR SIMULATION 2020. [DOI: 10.1080/08927022.2020.1754412] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Bina Kumari
- School of Physical Sciences, Jawaharlal Nehru University, New Delhi, India
| | - Pradipta Bandyopadhyay
- School of Computational and Integrative Sciences, Jawaharlal Nehru University, New Delhi, India
| | - Subir K. Sarkar
- School of Physical Sciences, Jawaharlal Nehru University, New Delhi, India
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10
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Feria E, Algaba J, Míguez JM, Mejía A, Gómez-Álvarez P, Blas FJ. Vapour–liquid phase equilibria and interfacial properties of fatty acid methyl esters from molecular dynamics simulations. Phys Chem Chem Phys 2020; 22:4974-4983. [DOI: 10.1039/c9cp06397h] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Vapour–liquid surface tension as a function of temperature for methyl esters. Filled symbols are experimental data taken from the literature and open symbols MD NVT simulations.
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Affiliation(s)
- Esther Feria
- Laboratorio de Simulación Molecular y Química Computacional
- CIQSO-Centro de Investigación en Química Sostenible and Departamento de Ciencias Integradas
- Universidad de Huelva
- 21007 Huelva
- Spain
| | - Jesús Algaba
- Laboratorio de Simulación Molecular y Química Computacional
- CIQSO-Centro de Investigación en Química Sostenible and Departamento de Ciencias Integradas
- Universidad de Huelva
- 21007 Huelva
- Spain
| | - José Manuel Míguez
- Laboratorio de Simulación Molecular y Química Computacional
- CIQSO-Centro de Investigación en Química Sostenible and Departamento de Ciencias Integradas
- Universidad de Huelva
- 21007 Huelva
- Spain
| | - Andrés Mejía
- Departamento de Ingeniería Química
- Universidad de Concepción
- POB 160-C Concepción
- Chile
| | - Paula Gómez-Álvarez
- Laboratorio de Simulación Molecular y Química Computacional
- CIQSO-Centro de Investigación en Química Sostenible and Departamento de Ciencias Integradas
- Universidad de Huelva
- 21007 Huelva
- Spain
| | - Felipe J. Blas
- Laboratorio de Simulación Molecular y Química Computacional
- CIQSO-Centro de Investigación en Química Sostenible and Departamento de Ciencias Integradas
- Universidad de Huelva
- 21007 Huelva
- Spain
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11
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Rahbari A, Hens R, Dubbeldam D, Vlugt TJH. Improving the accuracy of computing chemical potentials in CFCMC simulations. Mol Phys 2019. [DOI: 10.1080/00268976.2019.1631497] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- A. Rahbari
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft, Netherlands
| | - R. Hens
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft, Netherlands
| | - D. Dubbeldam
- Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam, Netherlands
| | - T. J. H. Vlugt
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft, Netherlands
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12
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Schlaich A, Coasne B. Dispersion truncation affects the phase behavior of bulk and confined fluids: Coexistence, adsorption, and criticality. J Chem Phys 2019; 150:154104. [DOI: 10.1063/1.5085431] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023] Open
Affiliation(s)
| | - Benoit Coasne
- Université Grenoble Alpes, CNRS, LIPhy, 38000 Grenoble, France
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13
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Nikolaidis IK, Poursaeidesfahani A, Csaszar Z, Ramdin M, Vlugt TJH, Economou IG, Moultos OA. Modeling the phase equilibria of asymmetric hydrocarbon mixtures using molecular simulation and equations of state. AIChE J 2018. [DOI: 10.1002/aic.16453] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Ilias K. Nikolaidis
- National Center for Scientific Research “Demokritos”, Institute of Nanoscience and Nanotechnology, Molecular Thermodynamics and Modelling of Materials Laboratory; Aghia Paraskevi Attikis Greece
- School of Chemical Engineering; National Technical University of Athens; Athens Greece
| | - Ali Poursaeidesfahani
- Engineering Thermodynamics, Process and Energy Dept., Faculty of Mechanical, Maritime and Materials Engineering; Delft University of Technology; Delft The Netherlands
| | - Zsolt Csaszar
- Engineering Thermodynamics, Process and Energy Dept., Faculty of Mechanical, Maritime and Materials Engineering; Delft University of Technology; Delft The Netherlands
| | - Mahinder Ramdin
- Engineering Thermodynamics, Process and Energy Dept., Faculty of Mechanical, Maritime and Materials Engineering; Delft University of Technology; Delft The Netherlands
| | - Thijs J. H. Vlugt
- Engineering Thermodynamics, Process and Energy Dept., Faculty of Mechanical, Maritime and Materials Engineering; Delft University of Technology; Delft The Netherlands
| | - Ioannis G. Economou
- National Center for Scientific Research “Demokritos”, Institute of Nanoscience and Nanotechnology, Molecular Thermodynamics and Modelling of Materials Laboratory; Aghia Paraskevi Attikis Greece
- Chemical Engineering Program; Texas A&M University at Qatar; Doha Qatar
| | - Othonas A. Moultos
- Engineering Thermodynamics, Process and Energy Dept., Faculty of Mechanical, Maritime and Materials Engineering; Delft University of Technology; Delft The Netherlands
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14
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Jung H, Yethiraj A. A simulation method for the phase diagram of complex fluid mixtures. J Chem Phys 2018; 148:244903. [PMID: 29960369 DOI: 10.1063/1.5033958] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The phase behavior of complex fluid mixtures is of continuing interest, but obtaining the phase diagram from computer simulations can be challenging. In the Gibbs ensemble method, for example, each of the coexisting phases is simulated in a different cell, and ensuring the equality of chemical potentials of all components requires the transfer of molecules from one cell to the other. For complex fluids such as polymers, successful insertions are rare. An alternative method is to simulate both coexisting phases in a single simulation cell, with an interface between them. The challenge here is that the interface position moves during the simulation, making it difficult to determine the concentration profile and coexisting concentrations. In this work, we propose a new method for single cell simulations that uses a spatial concentration autocorrelation function to (spatially) align instantaneous concentration profiles from different snapshots. This allows one to obtain average concentration profiles and hence the coexisting concentrations. We test the method by calculating the phase diagrams of two systems: the Widom-Rowlinson model and the symmetric blends of freely jointed polymer molecules for which phase diagrams from conventional methods are available. Excellent agreement is found, except in the neighborhood of the critical point where the interface is broad and finite size effects are important. The method is easy to implement and readily applied to any mixture of complex fluids.
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Affiliation(s)
- Hyuntae Jung
- Theoretical Chemistry Institute and Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706, USA
| | - Arun Yethiraj
- Theoretical Chemistry Institute and Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706, USA
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15
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Messerly RA, Knotts TA, Wilding WV. Uncertainty quantification and propagation of errors of the Lennard-Jones 12-6 parameters for n-alkanes. J Chem Phys 2018; 146:194110. [PMID: 28527455 DOI: 10.1063/1.4983406] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
Molecular simulation has the ability to predict various physical properties that are difficult to obtain experimentally. For example, we implement molecular simulation to predict the critical constants (i.e., critical temperature, critical density, critical pressure, and critical compressibility factor) for large n-alkanes that thermally decompose experimentally (as large as C48). Historically, molecular simulation has been viewed as a tool that is limited to providing qualitative insight. One key reason for this perceived weakness in molecular simulation is the difficulty to quantify the uncertainty in the results. This is because molecular simulations have many sources of uncertainty that propagate and are difficult to quantify. We investigate one of the most important sources of uncertainty, namely, the intermolecular force field parameters. Specifically, we quantify the uncertainty in the Lennard-Jones (LJ) 12-6 parameters for the CH4, CH3, and CH2 united-atom interaction sites. We then demonstrate how the uncertainties in the parameters lead to uncertainties in the saturated liquid density and critical constant values obtained from Gibbs Ensemble Monte Carlo simulation. Our results suggest that the uncertainties attributed to the LJ 12-6 parameters are small enough that quantitatively useful estimates of the saturated liquid density and the critical constants can be obtained from molecular simulation.
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Affiliation(s)
- Richard A Messerly
- Department of Chemical Engineering, Brigham Young University, Provo, Utah 84602, USA
| | - Thomas A Knotts
- Department of Chemical Engineering, Brigham Young University, Provo, Utah 84602, USA
| | - W Vincent Wilding
- Department of Chemical Engineering, Brigham Young University, Provo, Utah 84602, USA
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16
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Tang D, Wu Y, Verploegh RJ, Sholl DS. Efficiently Exploring Adsorption Space to Identify Privileged Adsorbents for Chemical Separations of a Diverse Set of Molecules. CHEMSUSCHEM 2018; 11:1567-1575. [PMID: 29624911 DOI: 10.1002/cssc.201702289] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Revised: 03/13/2018] [Accepted: 04/01/2018] [Indexed: 06/08/2023]
Abstract
Although computational models have been used to predict adsorption of molecules in large libraries of porous adsorbents, previous work of this kind has focused on a small number of molecules as potential adsorbates. In this study, molecular simulations were used to consider the adsorption of a diverse range of molecules in a large collection of metal-organic framework (MOF) materials. Specifically, 11 304 isotherms were obtained from molecular simulations of 24 different adsorbates in 471 MOFs. This information provides insight into several interesting questions that could not be addressed with previously available data. Highly computationally efficient methods are introduced that can predict isotherms for a wide range of adsorbing molecules with far less computation than traditional molecular simulations. By characterizing the 276 binary mixtures defined by the molecules considered, "privileged" adsorbents are shown to exist, which are effective for separating many different molecular mixtures. Finally, correlations that were developed previously to predict molecular solubility in polymers are found to be surprisingly effective in predicting the average properties of molecules adsorbing in MOFs.
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Affiliation(s)
- Dai Tang
- School of Chemical & Biomolecular Engineering, Georgia Institute of Technology, 311 Ferst Drive NW, Atlanta, Georgia, 30332-0100, USA
| | - Ying Wu
- School of Chemical & Biomolecular Engineering, Georgia Institute of Technology, 311 Ferst Drive NW, Atlanta, Georgia, 30332-0100, USA
- School of Chemical and Chemical Engineering, South China University of Technology, Guangzhou, China
| | - Ross J Verploegh
- School of Chemical & Biomolecular Engineering, Georgia Institute of Technology, 311 Ferst Drive NW, Atlanta, Georgia, 30332-0100, USA
| | - David S Sholl
- School of Chemical & Biomolecular Engineering, Georgia Institute of Technology, 311 Ferst Drive NW, Atlanta, Georgia, 30332-0100, USA
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17
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Hens R, Vlugt TJH. Molecular Simulation of Vapor-Liquid Equilibria Using the Wolf Method for Electrostatic Interactions. JOURNAL OF CHEMICAL AND ENGINEERING DATA 2018; 63:1096-1102. [PMID: 30258248 PMCID: PMC6150682 DOI: 10.1021/acs.jced.7b00839] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 11/29/2017] [Indexed: 06/08/2023]
Abstract
The applicability of the Wolf method for calculating electrostatic interactions is verified for simulating vapor-liquid equilibria of hydrogen sulfide, methanol, and carbon dioxide. Densities, chemical potentials, and critical properties are obtained with Monte Carlo simulations using the Continuous Fractional Component version of the Gibbs Ensemble. Saturated vapor pressures are obtained from NPT simulations. Excellent agreement is found between simulation results and data from literature (simulations using the Ewald summation). It is also shown how to choose the optimal parameters for the Wolf method. Even though the Wolf method requires a large simulation box in the gas phase, due to the lack of screening of electrostatics, one can consider the Wolf method as a suitable alternative to the Ewald summation in VLE calculations.
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18
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Esposito C, Vitalis A. Precise estimation of transfer free energies for ionic species between similar media. Phys Chem Chem Phys 2018; 20:27003-27010. [DOI: 10.1039/c8cp05331f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Two-dimensional umbrella sampling is combined with molecular dynamics to calculate correction-free estimates of transfer properties for individual ions.
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Affiliation(s)
- Carmen Esposito
- University of Zurich
- Department of Biochemistry
- CH-8057 Zurich
- Switzerland
| | - Andreas Vitalis
- University of Zurich
- Department of Biochemistry
- CH-8057 Zurich
- Switzerland
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19
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Ramdin M, Jamali SH, Becker TM, Vlugt TJH. Gibbs ensemble Monte Carlo simulations of multicomponent natural gas mixtures. MOLECULAR SIMULATION 2017. [DOI: 10.1080/08927022.2017.1387656] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- M. Ramdin
- Engineering Thermodynamics, Process & Energy Department, Faculty 3mE, Delft University of Technology, Delft, The Netherlands
| | - S. H. Jamali
- Engineering Thermodynamics, Process & Energy Department, Faculty 3mE, Delft University of Technology, Delft, The Netherlands
| | - T. M. Becker
- Engineering Thermodynamics, Process & Energy Department, Faculty 3mE, Delft University of Technology, Delft, The Netherlands
| | - T. J. H. Vlugt
- Engineering Thermodynamics, Process & Energy Department, Faculty 3mE, Delft University of Technology, Delft, The Netherlands
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20
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Vlasiuk M, Sadus RJ. Predicting vapor-liquid phase equilibria with augmented ab initio interatomic potentials. J Chem Phys 2017; 146:244504. [DOI: 10.1063/1.4986917] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Maryna Vlasiuk
- Centre for Molecular Simulation, Swinburne University of Technology, P.O. Box 218, Hawthorn, Victoria 3122, Australia
| | - Richard J. Sadus
- Centre for Molecular Simulation, Swinburne University of Technology, P.O. Box 218, Hawthorn, Victoria 3122, Australia
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21
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Chakraborti T, Adhikari J. Phase Equilibria and Critical Point Predictions of Mixtures of Molecular Fluids Using Grand Canonical Transition Matrix Monte Carlo. Ind Eng Chem Res 2017. [DOI: 10.1021/acs.iecr.7b01114] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Affiliation(s)
- Tamaghna Chakraborti
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400476, India
| | - Jhumpa Adhikari
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400476, India
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22
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Poursaeidesfahani A, Rahbari A, Torres-Knoop A, Dubbeldam D, Vlugt TJH. Computation of thermodynamic properties in the continuous fractional component Monte Carlo Gibbs ensemble. MOLECULAR SIMULATION 2016. [DOI: 10.1080/08927022.2016.1244607] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Ali Poursaeidesfahani
- Faculty of Mechanical, Engineering Thermodynamics, Process & Energy Department, Maritime and Materials Engineering, Delft University of Technology, Delft, The Netherlands
| | - Ahmadreza Rahbari
- Faculty of Mechanical, Engineering Thermodynamics, Process & Energy Department, Maritime and Materials Engineering, Delft University of Technology, Delft, The Netherlands
| | - Ariana Torres-Knoop
- Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam, The Netherlands
| | - David Dubbeldam
- Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam, The Netherlands
| | - Thijs J. H. Vlugt
- Faculty of Mechanical, Engineering Thermodynamics, Process & Energy Department, Maritime and Materials Engineering, Delft University of Technology, Delft, The Netherlands
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23
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Gartner TE, Epps TH, Jayaraman A. Leveraging Gibbs Ensemble Molecular Dynamics and Hybrid Monte Carlo/Molecular Dynamics for Efficient Study of Phase Equilibria. J Chem Theory Comput 2016; 12:5501-5510. [DOI: 10.1021/acs.jctc.6b00575] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Thomas E. Gartner
- Department
of Chemical and Biomolecular Engineering, University of Delaware, 150 Academy Street, Newark Delaware 19716, United States
| | - Thomas H. Epps
- Department
of Chemical and Biomolecular Engineering, University of Delaware, 150 Academy Street, Newark Delaware 19716, United States
- Department
of Materials Science and Engineering, University of Delaware, 201 DuPont
Hall, Newark Delaware 19716
| | - Arthi Jayaraman
- Department
of Chemical and Biomolecular Engineering, University of Delaware, 150 Academy Street, Newark Delaware 19716, United States
- Department
of Materials Science and Engineering, University of Delaware, 201 DuPont
Hall, Newark Delaware 19716
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24
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Goujon F, Ghoufi A, Malfreyt P, Tildesley DJ. Can we approach the gas–liquid critical point using slab simulations of two coexisting phases? J Chem Phys 2016; 145:124702. [DOI: 10.1063/1.4962820] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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25
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Garrido JM, Algaba J, Míguez JM, Mendiboure B, Moreno-Ventas Bravo AI, Piñeiro MM, Blas FJ. On interfacial properties of tetrahydrofuran: Atomistic and coarse-grained models from molecular dynamics simulation. J Chem Phys 2016; 144:144702. [DOI: 10.1063/1.4945385] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Affiliation(s)
- J. M. Garrido
- Departamento de Ingeniería Química, Universidad de Concepción, POB 160-C Concepción, Chile
| | - J. Algaba
- Laboratorio de Simulación Molecular y Química Computacional, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Física Aplicada, Universidad de Huelva, 21007 Huelva, Spain
| | - J. M. Míguez
- Laboratoire des Fluides Complexes et Leurs Reservoirs, Université de Pau et des Pays de l’Adour, CNRS, TOTAL–UMR 5150, Avenue de l’Université, B.P. 1155, Pau F-64013, France
- Departamento de Física Aplicada, Universidade de Vigo, E36310 Vigo, Spain
| | - B. Mendiboure
- Laboratoire des Fluides Complexes et Leurs Reservoirs, Université de Pau et des Pays de l’Adour, CNRS, TOTAL–UMR 5150, Avenue de l’Université, B.P. 1155, Pau F-64013, France
| | - A. I. Moreno-Ventas Bravo
- Laboratorio de Simulación Molecular y Química Computacional, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Geología, Universidad de Huelva, 21007 Huelva, Spain
| | - M. M. Piñeiro
- Departamento de Física Aplicada, Universidade de Vigo, E36310 Vigo, Spain
| | - F. J. Blas
- Laboratorio de Simulación Molecular y Química Computacional, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Física Aplicada, Universidad de Huelva, 21007 Huelva, Spain
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26
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Poursaeidesfahani A, Torres-Knoop A, Dubbeldam D, Vlugt TJH. Direct Free Energy Calculation in the Continuous Fractional Component Gibbs Ensemble. J Chem Theory Comput 2016; 12:1481-90. [DOI: 10.1021/acs.jctc.5b01230] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ali Poursaeidesfahani
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft University of Technology, Leeghwaterstraat 39, 2628CB Delft, The Netherlands
| | - Ariana Torres-Knoop
- Van’t
Hoff Institute for Molecular Sciences, University of Amsterdam, Science
Park 904, 1098XH Amsterdam, The Netherlands
| | - David Dubbeldam
- Van’t
Hoff Institute for Molecular Sciences, University of Amsterdam, Science
Park 904, 1098XH Amsterdam, The Netherlands
| | - Thijs J. H. Vlugt
- Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering, Delft University of Technology, Leeghwaterstraat 39, 2628CB Delft, The Netherlands
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