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Wang Y, Mou X, Ji Y, Pan F, Li S. Interaction of Macromolecular Chain with Phospholipid Membranes in Solutions: A Dissipative Particle Dynamics Simulation Study. Molecules 2023; 28:5790. [PMID: 37570760 PMCID: PMC10420874 DOI: 10.3390/molecules28155790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 07/24/2023] [Accepted: 07/27/2023] [Indexed: 08/13/2023] Open
Abstract
The interaction between macromolecular chains and phospholipid membranes in aqueous solution was investigated using dissipative particle dynamics simulations. Two cases were considered, one in which the macromolecular chains were pulled along parallel to the membrane surfaces and another in which they were pulled vertical to the membrane surfaces. Several parameters, including the radius of gyration, shape factor, particle number, and order parameter, were used to investigate the interaction mechanisms during the dynamics processes by adjusting the pulling force strength of the chains. In both cases, the results showed that the macromolecular chains undergo conformational transitions from a coiled to a rod-like structure. Furthermore, the simulations revealed that the membranes can be damaged and repaired during the dynamic processes. The role of the pulling forces and the adsorption interactions between the chains and membranes differed in the parallel and perpendicular pulling cases. These findings contribute to our understanding of the interaction mechanisms between macromolecules and membranes, and they may have potential applications in biology and medicine.
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Affiliation(s)
- Yuane Wang
- Department of Physics, Wenzhou University, Wenzhou 325035, China; (Y.W.); (X.M.); (Y.J.)
| | - Xuankang Mou
- Department of Physics, Wenzhou University, Wenzhou 325035, China; (Y.W.); (X.M.); (Y.J.)
| | - Yongyun Ji
- Department of Physics, Wenzhou University, Wenzhou 325035, China; (Y.W.); (X.M.); (Y.J.)
| | - Fan Pan
- School of Data Science and Artificial Intelligence, Wenzhou University of Technology, Wenzhou 325035, China
| | - Shiben Li
- Department of Physics, Wenzhou University, Wenzhou 325035, China; (Y.W.); (X.M.); (Y.J.)
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Zhang Q, He XH. Phase Separation of Polymer Blends Induced by an External Static Electric Field. CHINESE JOURNAL OF POLYMER SCIENCE 2022. [DOI: 10.1007/s10118-022-2877-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Merekalov AS, Derikov YI, Ezhov AA, Kriksin YA, Erukhimovich IY, Kudryavtsev YV. Orientation control of the hexagonal and lamellar phases in thin block copolymers films using in-plane AC electric field. POLYMER 2022. [DOI: 10.1016/j.polymer.2022.125544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Sun L, Pan F, Li S. Self-Assembly of Lipid Mixtures in Solutions: Structures, Dynamics Processes and Mechanical Properties. MEMBRANES 2022; 12:membranes12080730. [PMID: 35893448 PMCID: PMC9394357 DOI: 10.3390/membranes12080730] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 07/19/2022] [Accepted: 07/20/2022] [Indexed: 02/01/2023]
Abstract
The self-assembly of lipid mixtures in aqueous solution was investigated by dissipative particle dynamics simulation. Two types of lipid molecules were modelled, where three mixed structures, i.e., the membrane, perforated membrane and vesicle, were determined in the self-assembly processes. Phase behaviour was investigated by using the phase diagrams based on the tail chain lengths for the two types of lipids. Several parameters, such as chain number and average radius of gyration, were employed to explore the structural formations of the membrane and perforated membrane in the dynamic processes. Interface tension was used to demonstrate the mechanical properties of the membrane and perforated membrane in the equilibrium state and dynamics processes. Results help us to understand the self-assembly mechanism of the biomolecule mixtures, which has a potential application for designing the lipid molecule-based bio-membranes in solutions.
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Affiliation(s)
| | - Fan Pan
- Correspondence: (F.P.); (S.L.)
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Zhang Q, Xu R, Kan D, He X. Erratum: "Molecular dynamics simulation of electric-field-induced self-assembly of diblock copolymers" [J. Chem. Phys. 144, 234901 (2016)]. J Chem Phys 2022; 156:229901. [PMID: 35705421 DOI: 10.1063/5.0098744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Qiuzhi Zhang
- Department of Chemistry, School of Science, Tianjin University, and Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300072, China
| | - Rui Xu
- Department of Chemistry, School of Science, Tianjin University, and Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300072, China
| | - Di Kan
- Department of Chemistry, School of Science, Tianjin University, and Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300072, China
| | - Xuehao He
- Department of Chemistry, School of Science, Tianjin University, and Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300072, China
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Erukhimovich IY, Kriksin YA, Kudryavtsev YV. Block Copolymers in High-Frequency Electric Field: Mean-Field Approximation. POLYMER SCIENCE SERIES A 2022. [DOI: 10.1134/s0965545x22020079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Zhang Z, Zofchak E, Krajniak J, Ganesan V. Influence of Polarizability on the Structure, Dynamic Characteristics, and Ion-Transport Mechanisms in Polymeric Ionic Liquids. J Phys Chem B 2022; 126:2583-2592. [DOI: 10.1021/acs.jpcb.1c10662] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Zidan Zhang
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Everett Zofchak
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Jakub Krajniak
- Independent Researcher, os. Kosmonautow 13/56, 61-631 Poznan, Poland
| | - Venkat Ganesan
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
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Merekalov AS, Derikov YI, Artemov VV, Ezhov AA, Kudryavtsev YV. Vertical Cylinder-to-Lamella Transition in Thin Block Copolymer Films Induced by In-Plane Electric Field. Polymers (Basel) 2021; 13:3959. [PMID: 34833258 PMCID: PMC8622010 DOI: 10.3390/polym13223959] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2021] [Revised: 11/10/2021] [Accepted: 11/11/2021] [Indexed: 11/16/2022] Open
Abstract
Morphological transition between hexagonal and lamellar patterns in thin polystyrene-block-poly(4-vinyl pyridine) films simultaneously exposed to a strong in-plane electric field and saturated solvent vapor is studied with atomic force and scanning electron microscopy. In these conditions, standing cylinders made of 4-vinyl pyridine blocks arrange into threads up to tens of microns long along the field direction and then partially merge into standing lamellas. In the course of rearrangement, the copolymer remains strongly segregated, with the minor component domains keeping connectivity between the film surfaces. The ordering tendency becomes more pronounced if the cylinders are doped with Au nanorods, which can increase their dielectric permittivity. Non-selective chloroform vapor works particularly well, though it causes partial etching of the indium tin oxide cathode. On the contrary, 1,4-dioxane vapor selective to polystyrene matrix does not allow for any morphological changes.
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Affiliation(s)
- Alexey S. Merekalov
- Topchiev Institute of Petrochemical Synthesis, Russian Academy of Sciences, 119991 Moscow, Russia; (A.S.M.); (Y.I.D.); (A.A.E.)
| | - Yaroslav I. Derikov
- Topchiev Institute of Petrochemical Synthesis, Russian Academy of Sciences, 119991 Moscow, Russia; (A.S.M.); (Y.I.D.); (A.A.E.)
| | - Vladimir V. Artemov
- Shubnikov Institute of Crystallography, Federal Scientific Research Centre “Crystallography and Photonics”, Russian Academy of Sciences, 119333 Moscow, Russia;
| | - Alexander A. Ezhov
- Topchiev Institute of Petrochemical Synthesis, Russian Academy of Sciences, 119991 Moscow, Russia; (A.S.M.); (Y.I.D.); (A.A.E.)
- Faculty of Physics, Lomonosov Moscow State University, 119991 Moscow, Russia
| | - Yaroslav V. Kudryavtsev
- Topchiev Institute of Petrochemical Synthesis, Russian Academy of Sciences, 119991 Moscow, Russia; (A.S.M.); (Y.I.D.); (A.A.E.)
- Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, 119071 Moscow, Russia
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Lv Y, Wang L, Wu F, Gong S, Wei J, Lin S. Self-assembly and stimuli-responsive behaviours of side-chain liquid crystalline copolymers: a dissipative particle dynamics simulation approach. Phys Chem Chem Phys 2019; 21:7645-7653. [DOI: 10.1039/c9cp00400a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Side-chain liquid crystalline copolymers are able to self-assemble into various aggregates in selective solvents, in particular, deformed structures.
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Affiliation(s)
- Yisheng Lv
- Shanghai Key Laboratory of Advanced Polymeric Materials
- State Key Laboratory of Bioreactor Engineering
- Key Laboratory for Ultrafine Materials of Ministry of Education
- School of Materials Science and Engineering
- East China University of Science and Technology
| | - Liquan Wang
- Shanghai Key Laboratory of Advanced Polymeric Materials
- State Key Laboratory of Bioreactor Engineering
- Key Laboratory for Ultrafine Materials of Ministry of Education
- School of Materials Science and Engineering
- East China University of Science and Technology
| | - Fangsheng Wu
- Shanghai Key Laboratory of Advanced Polymeric Materials
- State Key Laboratory of Bioreactor Engineering
- Key Laboratory for Ultrafine Materials of Ministry of Education
- School of Materials Science and Engineering
- East China University of Science and Technology
| | - Shuting Gong
- Shanghai Key Laboratory of Advanced Polymeric Materials
- State Key Laboratory of Bioreactor Engineering
- Key Laboratory for Ultrafine Materials of Ministry of Education
- School of Materials Science and Engineering
- East China University of Science and Technology
| | - Jie Wei
- Shanghai Key Laboratory of Advanced Polymeric Materials
- State Key Laboratory of Bioreactor Engineering
- Key Laboratory for Ultrafine Materials of Ministry of Education
- School of Materials Science and Engineering
- East China University of Science and Technology
| | - Shaoliang Lin
- Shanghai Key Laboratory of Advanced Polymeric Materials
- State Key Laboratory of Bioreactor Engineering
- Key Laboratory for Ultrafine Materials of Ministry of Education
- School of Materials Science and Engineering
- East China University of Science and Technology
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