Microwave spectrum and non-covalent interactions of the 1, 2, 3, 4-tetrafluorobenzene-water complex

Fluorination effects on non-covalent binding forces: A rotational study on the 2-(trifluoromethyl)acrylic acid-water complex

This study explores the effects of the -CF3 group on non-covalent interactions through a comprehensive rotational investigation of the 2-(trifluoromethyl)acrylic acid-water complex. Employing Fourier transform microwave spectroscopy complemented by quantum chemical calculations, two isomers, i.e., s-cis and s-trans structures, have been observed in the pulsed jet. Based on relative intensity measurements, the s-cis to the s-trans population ratio was experimentally estimated to be ∼ 1:1.2. Subsequently, a comparison of the non-covalent interactions was carried out between the three similar complexes, acrylic acid-water, methacrylic acid-water, and 2-(trifluoromethyl)acrylic acid-water, offering quantitative insights into fluorination affecting the strength of the formed hydrogen bonds important, e.g., in molecular recognition.

Conformations and structures of 1,4-pentadien-3-ol and its water complex characterized by rotational spectroscopy

The 1,4-pentadien-3-ol and its monohydrate have been characterized by microwave spectroscopy in combination with theoretical computations. Experiments and ab initio calculations revealed that the 1,4-pentadien-3-ol monomer prefers a configuration with one vinyl being syn to the hydroxyl oxygen and the hydroxyl hydrogen toward the skew arranged vinyl, which therefore makes possible simultaneous CH···O and OH···π interactions. The observed monohydrate corresponds to the global minimum predicted theoretically, which is stabilized through a primary OH···O_w hydrogen bond together with a much weaker O_wH···π hydrogen bond. The NCI analyses, NBO calculation and SAPT method were applied to further elucidate the characteristics of hydrogen bonds in the 1,4-pentadien-3-ol···water complex.

Switching Aromatic Character by Complexation: π to π* Change Seen in Molecular Rotation Spectra

A dominating F···π*_aromatic interaction is found to govern the benzaldehyde···tetrafluoromethane complex, as revealed by this rotational spectroscopic investigation. Secondary F···π*_-C=O- and C σ*_CF4···π_aromatic interactions also contribute to the stability of the observed isomer. Narrow splittings have been observed in the rotational spectrum originating from a 3-fold internal rotation of CF₄ above the aromatic moiety, and a corresponding V₃ barrier was determined to be 1.572(14) kJ mol^-1. This is the first rotational spectroscopic evidence in the literature implying that the aromatic π* antibonding orbital can be activated not only by electron-withdrawing substituents but also by complexation partners containing atoms with high electronegativity, like CF₄. The results emphasize the partner molecules' role to modulate the π electron structure and show a change in the orbital character (π or π*) when participating in the formation of noncovalent interactions.

Do Docking Sites Persist Upon Fluorination? The Diadamantyl Ether-Aromatics Challenge for Rotational Spectroscopy and Theory

Fluorinated derivatives of biological molecules have proven to be highly efficient at modifying the biological activity of a given protein through changes in the stability and the kind of docking interactions. These interactions can be hindered or facilitated based on the hydrophilic/hydrophobic character of a particular protein region. Diadamantyl ether (C₂₀H₃₀O) possesses both kinds of docking sites, serving as a good template to model these important contacts with aromatic fluorinated counterparts. In this work, an experimental study on the structures of several complexes between diadamantyl ether and benzene as well as a series of fluorinated benzenes is reported to analyze the effect of H→F substitution on the interaction and structure of the resulting molecular clusters using rotational spectroscopy. All experimentally observed complexes are largely dominated by London dispersion interactions with the hydrogen‐terminated surface areas of diadamantyl ether. Already single substitution of one hydrogen atom with fluorine changes the preferred docking site of the complexes. However, the overall contributions of the different intermolecular interactions are similar for the different complexes, contrary to previous studies focusing on the difference in interactions using fluorinated and non‐fluorinated molecules.

Unveiling the structural and energetic properties of thiazole-water complex by microwave spectroscopy and theoretical calculations

The structure and non-covalent bonding features of the complex of thiazole and water were studied by using supersonic jet Fourier transform microwave spectroscopy and theoretical calculations. One isomer was observed which corresponds to the global minimum of the complex predicted theoretically. The rotational spectra of 9 additional isotopologues, including 5 mono-substituted heavy atoms of thiazole (³⁴S, ¹³C and ¹⁵N), and 4 water isotopic species (H₂¹⁸O, DOH, HOD and D₂O), were also measured and analyzed. The experimental spectroscopic parameters were used to determine the structural parameters of the observed isomer. Theoretical analyses based on quantum theory of atoms in molecules and natural bond orbital revealed that the two moieties are linked by a N···H-O hydrogen bond. The total interaction energy of the complex is calculated to be -25.1 kJmol^-1 with electrostatics being the major term according to energy decomposition analysis.