1
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Liu Z, Lyu N, Hu Z, Zeng H, Batista VS, Sun X. Benchmarking various nonadiabatic semiclassical mapping dynamics methods with tensor-train thermo-field dynamics. J Chem Phys 2024; 161:024102. [PMID: 38980091 DOI: 10.1063/5.0208708] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2024] [Accepted: 06/20/2024] [Indexed: 07/10/2024] Open
Abstract
Accurate quantum dynamics simulations of nonadiabatic processes are important for studies of electron transfer, energy transfer, and photochemical reactions in complex systems. In this comparative study, we benchmark various approximate nonadiabatic dynamics methods with mapping variables against numerically exact calculations based on the tensor-train (TT) representation of high-dimensional arrays, including TT-KSL for zero-temperature dynamics and TT-thermofield dynamics for finite-temperature dynamics. The approximate nonadiabatic dynamics methods investigated include mixed quantum-classical Ehrenfest mean-field and fewest-switches surface hopping, linearized semiclassical mapping dynamics, symmetrized quasiclassical dynamics, the spin-mapping method, and extended classical mapping models. Different model systems were evaluated, including the spin-boson model for nonadiabatic dynamics in the condensed phase, the linear vibronic coupling model for electronic transition through conical intersections, the photoisomerization model of retinal, and Tully's one-dimensional scattering models. Our calculations show that the optimal choice of approximate dynamical method is system-specific, and the accuracy is sensitively dependent on the zero-point-energy parameter and the initial sampling strategy for the mapping variables.
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Affiliation(s)
- Zengkui Liu
- Division of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai 200124, China
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China
- Department of Chemistry, New York University, New York, New York 10003, USA
| | - Ningyi Lyu
- Division of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai 200124, China
- Department of Chemistry, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, USA
| | - Zhubin Hu
- Division of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai 200124, China
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China
- State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200062, China
| | - Hao Zeng
- Division of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai 200124, China
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China
- State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200062, China
| | - Victor S Batista
- Department of Chemistry, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, USA
| | - Xiang Sun
- Division of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai 200124, China
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China
- Department of Chemistry, New York University, New York, New York 10003, USA
- State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200062, China
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2
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He X, Cheng X, Wu B, Liu J. Nonadiabatic Field with Triangle Window Functions on Quantum Phase Space. J Phys Chem Lett 2024; 15:5452-5466. [PMID: 38747729 PMCID: PMC11129318 DOI: 10.1021/acs.jpclett.4c00793] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Revised: 04/29/2024] [Accepted: 05/01/2024] [Indexed: 05/24/2024]
Abstract
Recent progress on the constraint coordinate-momentum phase space (CPS) formulation of finite-state quantum systems has revealed that the triangle window function approach is an isomorphic representation of the exact population-population correlation function of the two-state system. We use the triangle window (TW) function and the CPS mapping kernel element to formulate a novel useful representation of discrete electronic degrees of freedom (DOFs). When it is employed with nonadiabatic field (NaF) dynamics, a new variant of the NaF approach (i.e., NaF-TW) is proposed. The NaF-TW expression of the population of any adiabatic state is always positive semidefinite. Extensive benchmark tests of model systems in both the condensed phase and gas phase demonstrate that the NaF-TW approach is able to faithfully capture the dynamical interplay between electronic and nuclear DOFs in a broad region, including where the states remain coupled all the time, as well as where the bifurcation characteristic of nuclear motion is important.
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Affiliation(s)
- Xin He
- Beijing National Laboratory
for Molecular Sciences, Institute of Theoretical and Computational
Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Xiangsong Cheng
- Beijing National Laboratory
for Molecular Sciences, Institute of Theoretical and Computational
Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Baihua Wu
- Beijing National Laboratory
for Molecular Sciences, Institute of Theoretical and Computational
Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Jian Liu
- Beijing National Laboratory
for Molecular Sciences, Institute of Theoretical and Computational
Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
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3
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Liu Z, Song Z, Sun X. All-Atom Photoinduced Charge Transfer Dynamics in Condensed Phase via Multistate Nonlinear-Response Instantaneous Marcus Theory. J Chem Theory Comput 2024; 20:3993-4006. [PMID: 38657208 PMCID: PMC11099976 DOI: 10.1021/acs.jctc.4c00010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Revised: 03/30/2024] [Accepted: 04/08/2024] [Indexed: 04/26/2024]
Abstract
Photoinduced charge transfer (CT) in the condensed phase is an essential component in solar energy conversion, but it is challenging to simulate such a process on the all-atom level. The traditional Marcus theory has been utilized for obtaining CT rate constants between pairs of electronic states but cannot account for the nonequilibrium effects due to the initial nuclear preparation. The recently proposed instantaneous Marcus theory (IMT) and its nonlinear-response formulation allow for incorporating the nonequilibrium nuclear relaxation to electronic transition between two states after the photoexcitation from the equilibrium ground state and provide the time-dependent rate coefficient. In this work, we extend the nonlinear-response IMT method for treating photoinduced CT among general multiple electronic states and demonstrate it in the organic photovoltaic carotenoid-porphyrin-fullerene triad dissolved in explicit tetrahydrofuran solvent. All-atom molecular dynamics simulations were employed to obtain the time correlation functions of energy gaps, which were used to generate the IMT-required time-dependent averages and variances of the relevant energy gaps. Our calculations show that the multistate IMT could capture the significant nonequilibrium effects due to the initial nuclear state preparation, and this is corroborated by the substantial differences between the population dynamics predicted by the multistate IMT and the Marcus theory, where the Marcus theory underestimates the population transfer. The population dynamics by multistate IMT is also shown to have a better agreement with the all-atom nonadiabatic mapping dynamics than the Marcus theory does. Because the multistate nonlinear-response IMT is straightforward and cost-effective in implementation and accounts for the nonequilibrium nuclear effects, we believe this method offers a practical strategy for studying charge transfer dynamics in complex condensed-phase systems.
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Affiliation(s)
- Zengkui Liu
- Division
of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai 200124, China
- NYU-ECNU
Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China
- Department
of Chemistry, New York University, New York, New York 10003, United States
| | - Zailing Song
- Division
of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai 200124, China
| | - Xiang Sun
- Division
of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai 200124, China
- NYU-ECNU
Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China
- Department
of Chemistry, New York University, New York, New York 10003, United States
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4
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Runeson JE, Fay TP, Manolopoulos DE. Exciton dynamics from the mapping approach to surface hopping: comparison with Förster and Redfield theories. Phys Chem Chem Phys 2024; 26:4929-4938. [PMID: 38265093 PMCID: PMC10849040 DOI: 10.1039/d3cp05926j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Accepted: 01/03/2024] [Indexed: 01/25/2024]
Abstract
We compare the recently introduced multi-state mapping approach to surface hopping (MASH) with the Förster and Redfield theories of excitation energy transfer. Whereas Förster theory relies on weak coupling between chromophores, and Redfield theory assumes the electronic excitations to be weakly coupled to fast chromophore vibrations, MASH is free from any perturbative or Markovian approximations. We illustrate this with an example application to the rate of energy transfer in a Frenkel-exciton dimer, showing that MASH interpolates correctly between the opposing regimes in which the Förster and Redfield results are reliable. We then compare the three methods for a realistic model of the Fenna-Matthews-Olson complex with a structured vibrational spectral density and static disorder in the excitation energies. In this case there are no exact results for comparison so we use MASH to assess the validity of Förster and Redfield theories. We find that Förster theory is the more accurate of the two on the picosecond timescale, as has been shown previously for a simpler model of this particular light-harvesting complex. We also explore various ways to sample the initial electronic state in MASH and find that they all give very similar results for exciton dynamics.
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Affiliation(s)
- Johan E Runeson
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford, OX1 3QZ, UK.
| | - Thomas P Fay
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - David E Manolopoulos
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford, OX1 3QZ, UK.
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5
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Amati G, Mannouch JR, Richardson JO. Detailed balance in mixed quantum-classical mapping approaches. J Chem Phys 2023; 159:214114. [PMID: 38054513 DOI: 10.1063/5.0176291] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Accepted: 11/07/2023] [Indexed: 12/07/2023] Open
Abstract
The violation of detailed balance poses a serious problem for the majority of current quasiclassical methods for simulating nonadiabatic dynamics. In order to analyze the severity of the problem, we predict the long-time limits of the electronic populations according to various quasiclassical mapping approaches by applying arguments from classical ergodic theory. Our analysis confirms that regions of the mapping space that correspond to negative populations, which most mapping approaches introduce in order to go beyond the Ehrenfest approximation, pose the most serious issue for reproducing the correct thermalization behavior. This is because inverted potentials, which arise from negative electronic populations entering the nuclear force, can result in trajectories unphysically accelerating off to infinity. The recently developed mapping approach to surface hopping (MASH) provides a simple way of avoiding inverted potentials while retaining an accurate description of the dynamics. We prove that MASH, unlike any other quasiclassical approach, is guaranteed to describe the exact thermalization behavior of all quantum-classical systems, confirming it as one of the most promising methods for simulating nonadiabatic dynamics in real condensed-phase systems.
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Affiliation(s)
- Graziano Amati
- Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
| | - Jonathan R Mannouch
- Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
| | - Jeremy O Richardson
- Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
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6
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Liu Z, Hu H, Sun X. Multistate Reaction Coordinate Model for Charge and Energy Transfer Dynamics in the Condensed Phase. J Chem Theory Comput 2023; 19:7151-7170. [PMID: 37815937 PMCID: PMC10601487 DOI: 10.1021/acs.jctc.3c00770] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Indexed: 10/12/2023]
Abstract
Constructing multistate model Hamiltonians from all-atom electronic structure calculations and molecular dynamics simulations is crucial for understanding charge and energy transfer dynamics in complex condensed phases. The most popular two-level system model is the spin-boson Hamiltonian, where the nuclear degrees of freedom are represented as shifted normal modes. Recently, we proposed the general multistate nontrivial extension of the spin-boson model, i.e., the multistate harmonic (MSH) model, which is constructed by extending the spatial dimensions of each nuclear mode so as to satisfy the all-atom reorganization energy restrictions for all pairs of electronic states. In this work, we propose the multistate reaction coordinate (MRC) model with a primary reaction coordinate and secondary bath modes as in the Caldeira-Leggett form but in extended spatial dimensions. The MRC model is proven to be equivalent to the MSH model and offers an intuitive physical picture of the nuclear-electronic feedback in nonadiabatic processes such as the inherent trajectory of the reaction coordinate. The reaction coordinate is represented in extended dimensions, carrying the entire reorganization energies and bilinearly coupled to the secondary bath modes. We demonstrate the MRC model construction for photoinduced charge transfer in an organic photovoltaic caroteniod-porphyrin-C60 molecular triad dissolved in tetrahydrofuran as well as excitation energy transfer in a photosynthetic light-harvesting Fenna-Matthews-Olson complex. The MRC model provides an effective and robust platform for investigating quantum dissipative dynamics in complex condensed-phase systems since it allows a consistent description of realistic spectral density, state-dependent system-bath couplings, and heterogeneous environments due to static disorder in reorganization energies.
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Affiliation(s)
- Zengkui Liu
- Division
of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai, 200124, China
- NYU-ECNU
Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai, 200062, China
- Department
of Chemistry, New York University, New York, New York, 10003, United States
| | - Haorui Hu
- Division
of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai, 200124, China
| | - Xiang Sun
- Division
of Arts and Sciences, NYU Shanghai, 567 West Yangsi Road, Shanghai, 200124, China
- NYU-ECNU
Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai, 200062, China
- Department
of Chemistry, New York University, New York, New York, 10003, United States
- Shanghai
Frontiers Science Center of Artificial Intelligence and Deep Learning, NYU Shanghai, 567 West Yangsi Road, Shanghai, 200124, China
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7
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Miyazaki K, Ananth N. Nonadiabatic simulations of photoisomerization and dissociation in ethylene using ab initio classical trajectories. J Chem Phys 2023; 159:124110. [PMID: 38127384 DOI: 10.1063/5.0163371] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 09/05/2023] [Indexed: 12/23/2023] Open
Abstract
We simulate the nonadiabatic dynamics of photo-induced isomerization and dissociation in ethylene using ab initio classical trajectories in an extended phase space of nuclear and electronic variables. This is achieved by employing the linearized semiclassical initial value representation method for nonadiabatic dynamics, where discrete electronic states are mapped to continuous classical variables using either the Meyer-Miller-Stock-Thoss representation or a more recently introduced spin mapping approach. Trajectory initial conditions are sampled by constraining electronic state variables to a single initial excited state and by drawing nuclear phase space configurations from a Wigner distribution at a finite temperature. An ensemble of classical ab initio trajectories is then generated to compute thermal population correlation functions and analyze the mechanisms of isomerization and dissociation. Our results serve as a demonstration that this parameter-free semiclassical approach is computationally efficient and accurate, identifying mechanistic pathways in agreement with previous theoretical studies and also uncovering dissociation pathways observed experimentally.
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Affiliation(s)
- K Miyazaki
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA
| | - N Ananth
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA
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8
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Abstract
We present a nonadiabatic classical-trajectory approach that offers the best of both worlds between fewest-switches surface hopping (FSSH) and quasiclassical mapping dynamics. This mapping approach to surface hopping (MASH) propagates the nuclei on the active adiabatic potential-energy surface, such as in FSSH. However, unlike in FSSH, transitions between active surfaces are deterministic and occur when the electronic mapping variables evolve between specified regions of the electronic phase space. This guarantees internal consistency between the active surface and the electronic degrees of freedom throughout the dynamics. MASH is rigorously derivable from exact quantum mechanics as a limit of the quantum-classical Liouville equation (QCLE), leading to a unique prescription for momentum rescaling and frustrated hops. Hence, a quantum-jump procedure can, in principle, be used to systematically converge the accuracy of the results to that of the QCLE. This jump procedure also provides a rigorous framework for deriving approximate decoherence corrections similar to those proposed for FSSH. We apply MASH to simulate the nonadiabatic dynamics in various model systems and show that it consistently produces more accurate results than FSSH at a comparable computational cost.
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9
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Amati G, Runeson JE, Richardson JO. On detailed balance in nonadiabatic dynamics: From spin spheres to equilibrium ellipsoids. J Chem Phys 2023; 158:064113. [PMID: 36792511 DOI: 10.1063/5.0137828] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
Trajectory-based methods that propagate classical nuclei on multiple quantum electronic states are often used to simulate nonadiabatic processes in the condensed phase. A long-standing problem of these methods is their lack of detailed balance, meaning that they do not conserve the equilibrium distribution. In this article, we investigate ideas for restoring detailed balance in mixed quantum-classical systems by tailoring the previously proposed spin-mapping approach to thermal equilibrium. We find that adapting the spin magnitude can recover the correct long-time populations but is insufficient to conserve the full equilibrium distribution. The latter can however be achieved by a more flexible mapping of the spin onto an ellipsoid, which is constructed to fulfill detailed balance for arbitrary potentials. This ellipsoid approach solves the problem of negative populations that has plagued previous mapping approaches and can therefore be applied also to strongly asymmetric and anharmonic systems. Because it conserves the thermal distribution, the method can also exploit efficient sampling schemes used in standard molecular dynamics, which drastically reduces the number of trajectories needed for convergence. The dynamics does however still have mean-field character, as is observed most clearly by evaluating reaction rates in the golden-rule limit. This implies that although the ellipsoid mapping provides a rigorous framework, further work is required to find an accurate classical-trajectory approximation that captures more properties of the true quantum dynamics.
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Affiliation(s)
- Graziano Amati
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
| | - Johan E Runeson
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
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10
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Bossion D, Chowdhury SN, Huo P. Non-adiabatic ring polymer molecular dynamics in the phase space of the SU(N) Lie group. J Chem Phys 2023; 158:044123. [PMID: 36725494 DOI: 10.1063/5.0133970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
We derive the non-adiabatic ring polymer molecular dynamics (RPMD) approach in the phase space of the SU(N) Lie Group. This method, which we refer to as the spin mapping non-adiabatic RPMD (SM-NRPMD), is based on the spin-mapping formalism for the electronic degrees of freedom (DOFs) and ring polymer path-integral description for the nuclear DOFs. Using the Stratonovich-Weyl transform for the electronic DOFs and the Wigner transform for the nuclear DOFs, we derived an exact expression of the Kubo-transformed time-correlation function (TCF). We further derive the spin mapping non-adiabatic Matsubara dynamics using the Matsubara approximation that removes the high frequency nuclear normal modes in the TCF and derive the SM-NRPMD approach from the non-adiabatic Matsubara dynamics by discarding the imaginary part of the Liouvillian. The SM-NRPMD method has numerical advantages compared to the original NRPMD method based on the Meyer-Miller-Stock-Thoss (MMST) mapping formalism due to a more natural mapping using the SU(N) Lie Group that preserves the symmetry of the original system. We numerically compute the Kubo-transformed position auto-correlation function and electronic population correlation function for three-state model systems. The numerical results demonstrate the accuracy of the SM-NRPMD method, which outperforms the original MMST-based NRPMD. We envision that the SM-NRPMD method will be a powerful approach to simulate electronic non-adiabatic dynamics and nuclear quantum effects accurately.
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Affiliation(s)
- Duncan Bossion
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
| | - Sutirtha N Chowdhury
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
| | - Pengfei Huo
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
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11
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Amati G, Saller MAC, Kelly A, Richardson JO. Quasiclassical approaches to the generalized quantum master equation. J Chem Phys 2022; 157:234103. [PMID: 36550031 DOI: 10.1063/5.0124028] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
The formalism of the generalized quantum master equation (GQME) is an effective tool to simultaneously increase the accuracy and the efficiency of quasiclassical trajectory methods in the simulation of nonadiabatic quantum dynamics. The GQME expresses correlation functions in terms of a non-Markovian equation of motion, involving memory kernels that are typically fast-decaying and can therefore be computed by short-time quasiclassical trajectories. In this paper, we study the approximate solution of the GQME, obtained by calculating the kernels with two methods: Ehrenfest mean-field theory and spin-mapping. We test the approaches on a range of spin-boson models with increasing energy bias between the two electronic levels and place a particular focus on the long-time limits of the populations. We find that the accuracy of the predictions of the GQME depends strongly on the specific technique used to calculate the kernels. In particular, spin-mapping outperforms Ehrenfest for all the systems studied. The problem of unphysical negative electronic populations affecting spin-mapping is resolved by coupling the method with the master equation. Conversely, Ehrenfest in conjunction with the GQME can predict negative populations, despite the fact that the populations calculated from direct dynamics are positive definite.
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Affiliation(s)
- Graziano Amati
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
| | | | - Aaron Kelly
- The Hamburg Center for Ultrafast Imaging, Universität Hamburg, Max Planck Institute for the Structure and Dynamics of Matter and Center for Free-Electron Laser Science, 22761 Hamburg, Germany
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12
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Hu Z, Liu Z, Sun X. Effects of Heterogeneous Protein Environment on Excitation Energy Transfer Dynamics in the Fenna-Matthews-Olson Complex. J Phys Chem B 2022; 126:9271-9287. [PMID: 36327977 DOI: 10.1021/acs.jpcb.2c06605] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
The Fenna-Matthews-Olson (FMO) complex of green sulfur bacteria has been serving as a prototypical light-harvesting protein for studying excitation energy transfer (EET) dynamics in photosynthesis. The most widely used Frenkel exciton model for FMO complex assumes that each excited bacteriochlorophyll site couples to an identical and isolated harmonic bath, which does not account for the heterogeneous local protein environment. To better describe the realistic environment, we propose to use the recently developed multistate harmonic (MSH) model, which contains a globally shared bath that couples to the different pigment sites according to the atomistic quantum mechanics/molecular mechanics simulations with explicit protein scaffold and solvent. In this work, the effects of heterogeneous protein environment on EET in FMO complexes from Prosthecochloris aestuarii and Chlorobium tepidum, specifically including realistic spectral density, site-dependent reorganization energies, and system-bath couplings are investigated. Semiclassical and mixed quantum-classical mapping dynamics were applied to obtain the nonadiabatic EET dynamics in several models ranging from the Frenkel exciton model to the MSH model and their variants. The MSH model with realistic spectral density and site-dependent system-bath couplings displays slower EET dynamics than the Frenkel exciton model. Our comparative study shows that larger average reorganization energy, heterogeneity in spectral densities, and low-frequency modes could facilitate energy dissipation, which is insensitive to the static disorder in reorganization energies. The effects of the spectral densities and system-bath couplings along with the MSH model can be used to optimize EET dynamics for artificial light-harvesting systems.
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Affiliation(s)
- Zhubin Hu
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China.,NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China.,State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200062, China
| | - Zengkui Liu
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China.,NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China.,Department of Chemistry, New York University, New York, New York 10003, United States
| | - Xiang Sun
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China.,NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China.,State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200062, China.,Department of Chemistry, New York University, New York, New York 10003, United States
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13
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Hu Z, Sun X. All-Atom Nonadiabatic Semiclassical Mapping Dynamics for Photoinduced Charge Transfer of Organic Photovoltaic Molecules in Explicit Solvents. J Chem Theory Comput 2022; 18:5819-5836. [PMID: 36073792 DOI: 10.1021/acs.jctc.2c00631] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Direct all-atom simulation of nonadiabatic dynamics in disordered condensed phases like liquid solutions and amorphous solids has been challenging. The first all-atom simulation of the photoinduced charge-transfer dynamics of a prototypical organic photovoltaic carotenoid-porphyrin-C60 molecular triad in explicit tetrahydrofuran is presented. Based on the Meyer-Miller mapping Hamiltonian, various semiclassical and mixed quantum-classical dynamics are employed, including the linearized semiclassical, symmetrical quasiclassical, mean-field Ehrenfest, classical mapping model, and spin-mapping model approaches. The all-atom nonadiabatic dynamics were compared to multi-state harmonic models with a globally shared bath, and the models built using the ensemble averages on the initial electronic state could reproduce the all-atom results. The solvent effect was found to be critical for the photoinduced charge transfer, and the time-dependent solute-solvent radial distribution functions revealed that only the nonadiabatic dynamics started with the effective forces on the initial electronic state could capture the correct nuclear dynamics. The proposed strategy for modeling condensed-phase nonadiabatic dynamics with atomistic details is readily applied to complex condensed-phase systems.
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Affiliation(s)
- Zhubin Hu
- Division of Arts and Sciences, New York University Shanghai, 1555 Century Avenue, Shanghai 200122, China.,NYU-ECNU Center for Computational Chemistry, New York University Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China.,State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200062, China
| | - Xiang Sun
- Division of Arts and Sciences, New York University Shanghai, 1555 Century Avenue, Shanghai 200122, China.,NYU-ECNU Center for Computational Chemistry, New York University Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China.,State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200062, China.,Department of Chemistry, New York University, New York, New York 10003, United States
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14
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Bossion DL, Ying W, Chowdhury S, Huo P. Non-adiabatic Mapping Dynamics in the Phase Space of the ${SU}(N)$ Lie Group. J Chem Phys 2022; 157:084105. [DOI: 10.1063/5.0094893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We present the rigorous theoretical framework of the generalized spin mapping representation for non-adiabatic dynamics. Our work is based up a new mapping formalism recently introduced by Runeson and Richardson in [J. Chem. Phys. 152, 084110 (2020)], which uses the generators of the su(N) Lie algebra to represent N discrete electronic states, thus preserving the size of the original Hilbert space. Following this interesting idea, the Stratonovich-Weyl transform is used to map an operator in the Hilbert space to a continuous function on the SU(N) Lie group, i.e., a smooth manifold which is a phase space of continuous variables. We further use the Wigner representation to describe the nuclear degrees of freedom, and derived an exact expression of the time-correlation function as well as the exact quantum Liouvillian for the non-adiabatic system. Making the linearization approximation, this exact Liouvillian is reduced to the Liouvillian of several recently proposed methods, and the performance of this Linearized method is tested using non-adiabatic models. We envision that the theoretical work presented here provides a rigorous and unified framework to formally derive non-adiabatic quantum dynamics approaches with continuous variables and connect the previous methods in a clear and concise manner.
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Affiliation(s)
| | | | - Sutirtha Chowdhury
- Department of Chemistry, University of Rochester, United States of America
| | - Pengfei Huo
- Department of Chemsitry, University of Rochester Department of Chemistry, United States of America
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15
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He X, Wu B, Shang Y, Li B, Cheng X, Liu J. New phase space formulations and quantum dynamics approaches. WIRES COMPUTATIONAL MOLECULAR SCIENCE 2022. [DOI: 10.1002/wcms.1619] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Xin He
- Beijing National Laboratory for Molecular Sciences Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University Beijing China
| | - Baihua Wu
- Beijing National Laboratory for Molecular Sciences Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University Beijing China
| | - Youhao Shang
- Beijing National Laboratory for Molecular Sciences Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University Beijing China
| | - Bingqi Li
- Beijing National Laboratory for Molecular Sciences Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University Beijing China
| | - Xiangsong Cheng
- Beijing National Laboratory for Molecular Sciences Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University Beijing China
| | - Jian Liu
- Beijing National Laboratory for Molecular Sciences Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University Beijing China
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16
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Gardner J, Douglas-Gallardo OA, Stark WG, Westermayr J, Janke SM, Habershon S, Maurer RJ. NQCDynamics.jl: A Julia package for nonadiabatic quantum classical molecular dynamics in the condensed phase. J Chem Phys 2022; 156:174801. [PMID: 35525649 DOI: 10.1063/5.0089436] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
Accurate and efficient methods to simulate nonadiabatic and quantum nuclear effects in high-dimensional and dissipative systems are crucial for the prediction of chemical dynamics in the condensed phase. To facilitate effective development, code sharing, and uptake of newly developed dynamics methods, it is important that software implementations can be easily accessed and built upon. Using the Julia programming language, we have developed the NQCDynamics.jl package, which provides a framework for established and emerging methods for performing semiclassical and mixed quantum-classical dynamics in the condensed phase. The code provides several interfaces to existing atomistic simulation frameworks, electronic structure codes, and machine learning representations. In addition to the existing methods, the package provides infrastructure for developing and deploying new dynamics methods, which we hope will benefit reproducibility and code sharing in the field of condensed phase quantum dynamics. Herein, we present our code design choices and the specific Julia programming features from which they benefit. We further demonstrate the capabilities of the package on two examples of chemical dynamics in the condensed phase: the population dynamics of the spin-boson model as described by a wide variety of semiclassical and mixed quantum-classical nonadiabatic methods and the reactive scattering of H2 on Ag(111) using the molecular dynamics with electronic friction method. Together, they exemplify the broad scope of the package to study effective model Hamiltonians and realistic atomistic systems.
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Affiliation(s)
- James Gardner
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - Oscar A Douglas-Gallardo
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - Wojciech G Stark
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - Julia Westermayr
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - Svenja M Janke
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - Scott Habershon
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - Reinhard J Maurer
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
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17
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Saller MAC, Lai Y, Geva E. An Accurate Linearized Semiclassical Approach for Calculating Cavity-Modified Charge Transfer Rate Constants. J Phys Chem Lett 2022; 13:2330-2337. [PMID: 35245071 DOI: 10.1021/acs.jpclett.2c00122] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
We show that combining the linearized semiclasscial approximation with Fermi's golden rule (FGR) rate theory gives rise to a general-purpose cost-effective and scalable computational framework that can accurately capture the cavity-induced rate enhancement of charge transfer reactions that occurs when the molecular system is placed inside a microcavity. Both partial linearization with respect to the nuclear and photonic degrees of freedom and full linerization with respect to nuclear, photonic, and electronic degrees of freedom (the latter within the mapping Hamiltonian approach) are shown to be highly accurate, provided that the Wigner transforms of the product (WoP) of operators at the initial time is not replaced by the product of their Wigner transforms. We also show that the partial linearization method yields the quantum-mechanically exact cavity-modified FGR rate constant for a model system in which the donor and acceptor potential energy surfaces are harmonic and identical except for a shift in the equilibrium energy and geometry, if WoP is applied.
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Affiliation(s)
- Maximilian A C Saller
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Yifan Lai
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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18
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Abstract
Multidimensional optical spectra are measured from the response of a material system to a sequence of laser pulses and have the capacity to elucidate specific molecular interactions and dynamics whose influences are absent or obscured in a conventional linear absorption spectrum. Interpretation of complex spectra is supported by theoretical modeling of the spectroscopic observable, requiring implementation of quantum dynamics for coupled electrons and nuclei. Performing numerically correct quantum dynamics in this context may pose computational challenges, particularly in the condensed phase. Semiclassical methods based on calculating classical trajectories offer a practical alternative. Here I review the recent application of some semiclassical, trajectory-based methods to nonlinear molecular vibrational and electronic spectra. Expected final online publication date for the Annual Review of Physical Chemistry, Volume 73 is April 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
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Affiliation(s)
- Roger F. Loring
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York, USA
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19
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Mannouch JR, Richardson JO. A partially linearized spin-mapping approach for simulating nonlinear optical spectra. J Chem Phys 2022; 156:024108. [PMID: 35032975 DOI: 10.1063/5.0077744] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We present a partially linearized method based on spin-mapping for computing both linear and nonlinear optical spectra. As observables are obtained from ensembles of classical trajectories, the approach can be applied to the large condensed-phase systems that undergo photosynthetic light-harvesting processes. In particular, the recently derived spin partially linearized density matrix method has been shown to exhibit superior accuracy in computing population dynamics compared to other related classical-trajectory methods. Such a method should also be ideally suited to describing the quantum coherences generated by interaction with light. We demonstrate that this is, indeed, the case by calculating the nonlinear optical response functions relevant for the pump-probe and 2D photon-echo spectra for a Frenkel biexciton model and the Fenna-Matthews-Olsen light-harvesting complex. One especially desirable feature of our approach is that the full spectrum can be decomposed into its constituent components associated with the various Liouville-space pathways, offering a greater insight beyond what can be directly obtained from experiments.
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20
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Wu D, Hu Z, Li J, Sun X. Forecasting nonadiabatic dynamics using hybrid convolutional neural network/long short-term memory network. J Chem Phys 2021; 155:224104. [PMID: 34911307 DOI: 10.1063/5.0073689] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
Modeling nonadiabatic dynamics in complex molecular or condensed-phase systems has been challenging, especially for the long-time dynamics. In this work, we propose a time series machine learning scheme based on the hybrid convolutional neural network/long short-term memory (CNN-LSTM) framework for predicting the long-time quantum behavior, given only the short-time dynamics. This scheme takes advantage of both the powerful local feature extraction ability of CNN and the long-term global sequential pattern recognition ability of LSTM. With feature fusion of individually trained CNN-LSTM models for the quantum population and coherence dynamics, the proposed scheme is shown to have high accuracy and robustness in predicting the linearized semiclassical and symmetrical quasiclassical mapping dynamics as well as the mixed quantum-classical Liouville dynamics of various spin-boson models with learning time up to 0.3 ps. Furthermore, if the hybrid network has learned the dynamics of a system, this knowledge is transferable that could significantly enhance the accuracy in predicting the dynamics of a similar system. The hybrid CNN-LSTM network is thus believed to have high predictive power in forecasting the nonadiabatic dynamics in realistic charge and energy transfer processes in photoinduced energy conversion.
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Affiliation(s)
- Daxin Wu
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China
| | - Zhubin Hu
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China
| | - Jiebo Li
- Beijing Advanced Innovation Center for Biomedical Engineering, School of Biological Science and Medical Engineering, Institute of Medical Photonics, Beihang University, Beijing 100191, China
| | - Xiang Sun
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China
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21
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Liu J, He X, Wu B. Unified Formulation of Phase Space Mapping Approaches for Nonadiabatic Quantum Dynamics. Acc Chem Res 2021; 54:4215-4228. [PMID: 34756027 DOI: 10.1021/acs.accounts.1c00511] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Nonadiabatic dynamical processes are one of the most important quantum mechanical phenomena in chemical, materials, biological, and environmental molecular systems, where the coupling between different electronic states is either inherent in the molecular structure or induced by the (intense) external field. The curse of dimensionality indicates the intractable exponential scaling of calculation effort with system size and restricts the implementation of "numerically exact" approaches for realistic large systems. The phase space formulation of quantum mechanics offers an important theoretical framework for constructing practical approximate trajectory-based methods for quantum dynamics. This Account reviews our recent progress in phase space mapping theory: a unified framework for constructing the mapping Hamiltonian on phase space for coupled F-state systems where the renowned Meyer-Miller Hamiltonian model is a special case, a general phase space formulation of quantum mechanics for nonadiabatic systems where the electronic degrees of freedom are mapped onto constraint space and the nuclear degrees of freedom are mapped onto infinite space, and an isomorphism between the mapping phase space approach for nonadiabatic systems and that for nonequilibrium electron transport processes. While the zero-point-energy parameter is conventionally assumed to be positive, we show that the constraint implied in the conventional Meyer-Miller mapping Hamiltonian requires that such a parameter can be negative as well and lies in (-1/F, +∞) for each electronic degree of freedom. More importantly, the zero-point-energy parameter should be interpreted as a special case of a commutator matrix in the comprehensive phase space mapping Hamiltonian for nonadiabatic systems. From the rigorous formulation of mapping phase space, we propose approximate but practical trajectory-based nonadiabatic dynamics methods. The applications to both gas phase and condensed phase problems include the spin-boson model for condensed phase dissipative two-state systems, the three-state photodissociation models, the seven-site model of the Fenna-Matthews-Olson monomer in photosynthesis of green sulfur bacteria, the strongly coupled molecular/atomic matter-optical cavity systems designed for controlling and manipulating chemical dynamical processes, and the Landauer model for a quantum dot state coupled with two electrodes. In these applications the overall performance of our phase space mapping dynamics approach is superior to two prevailing trajectory-based methods, Ehrenfest dynamics and fewest switches surface hopping.
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Affiliation(s)
- Jian Liu
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Xin He
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Baihua Wu
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
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22
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Lai Y, Geva E. On simulating the dynamics of electronic populations and coherences via quantum master equations based on treating off-diagonal electronic coupling terms as a small perturbation. J Chem Phys 2021; 155:204101. [PMID: 34852488 DOI: 10.1063/5.0069313] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Quantum master equations provide a general framework for describing the dynamics of electronic observables within a complex molecular system. One particular family of such equations is based on treating the off-diagonal coupling terms between electronic states as a small perturbation within the framework of second-order perturbation theory. In this paper, we show how different choices of projection operators, as well as whether one starts out with the time-convolution or the time-convolutionless forms of the generalized quantum master equation, give rise to four different types of such off-diagonal quantum master equations (OD-QMEs), namely, time-convolution and time-convolutionless versions of a Pauli-type OD-QME for only the electronic populations and an OD-QME for the full electronic density matrix (including both electronic populations and coherences). The fact that those OD-QMEs are given in terms of the interaction picture makes it non-trivial to obtain Schrödinger picture electronic coherences from them. To address this, we also extend a procedure for extracting Schrödinger picture electronic coherences from interaction picture populations recently introduced by Trushechkin in the context of time-convolutionless Pauli-type OD-QME to the other three types of OD-QMEs. The performance of the aforementioned four types of OD-QMEs is explored in the context of the Garg-Onuchic-Ambegaokar benchmark model for charge transfer in the condensed phase across a relatively wide parameter range. The results show that time-convolution OD-QMEs can be significantly more accurate than their time-convolutionless counterparts, particularly in the case of Pauli-type OD-QMEs, and that rather accurate Schrödinger picture coherences can be obtained from interaction picture electronic inputs.
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Affiliation(s)
- Yifan Lai
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
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23
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Hu Z, Brian D, Sun X. Multi-state harmonic models with globally shared bath for nonadiabatic dynamics in the condensed phase. J Chem Phys 2021; 155:124105. [PMID: 34598571 DOI: 10.1063/5.0064763] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
Model Hamiltonians constructed from quantum chemistry calculations and molecular dynamics simulations are widely used for simulating nonadiabatic dynamics in the condensed phase. The most popular two-state spin-boson model could be built by mapping the all-atom anharmonic Hamiltonian onto a two-level system bilinearly coupled to a harmonic bath using the energy gap time correlation function. However, for more than two states, there lacks a general strategy to construct multi-state harmonic (MSH) models since the energy gaps between different pairs of electronic states are not entirely independent and need to be considered consistently. In this paper, we extend the previously proposed approach for building three-state harmonic models for photoinduced charge transfer to the arbitrary number of electronic states with a globally shared bath and the system-bath couplings are scaled differently according to the reorganization energies between each pair of states. We demonstrate the MSH model construction for an organic photovoltaic carotenoid-porphyrin-C60 molecular triad dissolved in explicit tetrahydrofuran solvent. Nonadiabatic dynamics was simulated using mixed quantum-classical techniques, including the linearized semiclassical and symmetrical quasiclassical dynamics with the mapping Hamiltonians, mean-field Ehrenfest, and mixed quantum-classical Liouville dynamics in two-state, three-state, and four-state harmonic models of the triad system. The MSH models are shown to provide a general and flexible framework for simulating nonadiabatic dynamics in complex systems.
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Affiliation(s)
- Zhubin Hu
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China
| | - Dominikus Brian
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China
| | - Xiang Sun
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China
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24
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He X, Wu B, Gong Z, Liu J. Commutator Matrix in Phase Space Mapping Models for Nonadiabatic Quantum Dynamics. J Phys Chem A 2021; 125:6845-6863. [PMID: 34339600 DOI: 10.1021/acs.jpca.1c04429] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
We show that a novel, general phase space mapping Hamiltonian for nonadiabatic systems, which is reminiscent of the renowned Meyer-Miller mapping Hamiltonian, involves a commutator variable matrix rather than the conventional zero-point-energy parameter. In the exact mapping formulation on constraint space for phase space approaches for nonadiabatic dynamics, the general mapping Hamiltonian with commutator variables can be employed to generate approximate trajectory-based dynamics. Various benchmark model tests, which range from gas phase to condensed phase systems, suggest that the overall performance of the general mapping Hamiltonian is better than that of the conventional Meyer-Miller Hamiltonian.
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Affiliation(s)
- Xin He
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Baihua Wu
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Zhihao Gong
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Jian Liu
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
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25
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Lang H, Vendrell O, Hauke P. Generalized discrete truncated Wigner approximation for nonadiabatic quantum-classical dynamics. J Chem Phys 2021; 155:024111. [PMID: 34266254 DOI: 10.1063/5.0054696] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Nonadiabatic molecular dynamics occur in a wide range of chemical reactions and femtochemistry experiments involving electronically excited states. These dynamics are hard to treat numerically as the system's complexity increases, and it is thus desirable to have accurate yet affordable methods for their simulation. Here, we introduce a linearized semiclassical method, the generalized discrete truncated Wigner approximation (GDTWA), which is well-established in the context of quantum spin lattice systems, into the arena of chemical nonadiabatic systems. In contrast to traditional continuous mapping approaches, e.g., the Meyer-Miller-Stock-Thoss and the spin mappings, GDTWA samples the electron degrees of freedom in a discrete phase space and thus forbids an unphysical unbounded growth of electronic state populations. The discrete sampling also accounts for an effective reduced but non-vanishing zero-point energy without an explicit parameter, which makes it possible to treat the identity operator and other operators on an equal footing. As numerical benchmarks on two linear vibronic coupling models and Tully's models show, GDTWA has a satisfactory accuracy in a wide parameter regime, independent of whether the dynamics is dominated by relaxation or by coherent interactions. Our results suggest that the method can be very adequate to treat challenging nonadiabatic dynamics problems in chemistry and related fields.
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Affiliation(s)
- Haifeng Lang
- Theoretical Chemistry, Institute of Physical Chemistry, Heidelberg University, Im Neuenheimer Feld 229, 69120 Heidelberg, Germany
| | - Oriol Vendrell
- Theoretical Chemistry, Institute of Physical Chemistry, Heidelberg University, Im Neuenheimer Feld 229, 69120 Heidelberg, Germany
| | - Philipp Hauke
- INO-CNR BEC Center and Department of Physics, University of Trento, Via Sommarive 14, I-38123 Trento, Italy
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26
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Mulvihill E, Lenn KM, Gao X, Schubert A, Dunietz BD, Geva E. Simulating energy transfer dynamics in the Fenna-Matthews-Olson complex via the modified generalized quantum master equation. J Chem Phys 2021; 154:204109. [PMID: 34241158 DOI: 10.1063/5.0051101] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The generalized quantum master equation (GQME) provides a general and formally exact framework for simulating the reduced dynamics of open quantum systems. The recently introduced modified approach to the GQME (M-GQME) corresponds to a specific implementation of the GQME that is geared toward simulating the dynamics of the electronic reduced density matrix in systems governed by an excitonic Hamiltonian. Such a Hamiltonian, which is often used for describing energy and charge transfer dynamics in complex molecular systems, is given in terms of diabatic electronic states that are coupled to each other and correspond to different nuclear Hamiltonians. Within the M-GQME approach, the effect of the nuclear degrees of freedom on the time evolution of the electronic density matrix is fully captured by a memory kernel superoperator, which can be obtained from short-lived (compared to the time scale of energy/charge transfer) projection-free inputs. In this paper, we test the ability of the M-GQME to predict the energy transfer dynamics within a seven-state benchmark model of the Fenna-Matthews-Olson (FMO) complex, with the short-lived projection-free inputs obtained via the Ehrenfest method. The M-GQME with Ehrenfest-based inputs is shown to yield accurate results across a wide parameter range. It is also found to dramatically outperform the direct application of the Ehrenfest method and to provide better-behaved convergence with respect to memory time in comparison to an alternative implementation of the GQME approach previously applied to the same FMO model.
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Affiliation(s)
- Ellen Mulvihill
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Kristina M Lenn
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Xing Gao
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Alexander Schubert
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Barry D Dunietz
- Department of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, USA
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
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27
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Hu D, Xie Y, Peng J, Lan Z. On-the-Fly Symmetrical Quasi-Classical Dynamics with Meyer-Miller Mapping Hamiltonian for the Treatment of Nonadiabatic Dynamics at Conical Intersections. J Chem Theory Comput 2021; 17:3267-3279. [PMID: 34028268 DOI: 10.1021/acs.jctc.0c01249] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The on-the-fly version of the symmetrical quasi-classical dynamics method based on the Meyer-Miller mapping Hamiltonian (SQC/MM) is implemented to study the nonadiabatic dynamics at conical intersections of polyatomic systems. The current on-the-fly implementation of the SQC/MM method is based on the adiabatic representation and the dressed momentum. To include the zero-point energy (ZPE) correction of the electronic mapping variables, we employ both the γ-adjusted and γ-fixed approaches. Nonadiabatic dynamics of the methaniminium cation (CH2NH2+) and azomethane are simulated using the on-the-fly SQC/MM method. For CH2NH2+, both ZPE correction approaches give reasonable and consistent results. However, for azomethane, the γ-adjusted version of the SQC/MM dynamics behaves much better than the γ-fixed version. Further analysis indicates that it is always recommended to use the γ-adjusted SQC/MM dynamics in the on-the-fly simulation of photoinduced dynamics of polyatomic systems, particularly when the excited state is well separated from the ground state in the Franck-Condon region. This work indicates that the on-the-fly SQC/MM method is a powerful simulation protocol to deal with the nonadiabatic dynamics of realistic polyatomic systems.
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Affiliation(s)
- Deping Hu
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China.,School of Environment, South China Normal University, Guangzhou 510006, China
| | - Yu Xie
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China.,School of Environment, South China Normal University, Guangzhou 510006, China
| | - Jiawei Peng
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China.,School of Environment, South China Normal University, Guangzhou 510006, China
| | - Zhenggang Lan
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China.,School of Environment, South China Normal University, Guangzhou 510006, China
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28
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Saller MAC, Kelly A, Geva E. Benchmarking Quasiclassical Mapping Hamiltonian Methods for Simulating Cavity-Modified Molecular Dynamics. J Phys Chem Lett 2021; 12:3163-3170. [PMID: 33755487 DOI: 10.1021/acs.jpclett.1c00158] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Recent experimental realizations of strong coupling between optical cavity modes and molecular matter placed inside the cavity have opened exciting new routes for controlling chemical processes. Simulating the cavity-modified dynamics of complex chemical systems calls for the development of accurate, flexible, and cost-effective approximate numerical methods that scale favorably with system size and complexity. In this Letter, we test the ability of quasiclassical mapping Hamiltonian methods to serve this purpose. We simulated the spontaneous emission dynamics of an atom confined to a microcavity via five different variations of the linearized semiclassical (LSC) method. Our main finding is that recently proposed LSC-based methods which use a modified form of the identity operator are reasonably accurate and perform significantly better than the Ehrenfest and standard LSC methods, without significantly increasing computational costs. These methods are therefore highly promising as a general purpose tool for simulating cavity-modified dynamics of complex chemical systems.
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Affiliation(s)
- Maximilian A C Saller
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Aaron Kelly
- Max Planck Institute for the Structure and Dynamics of Matter, Luruper Chaussee 149, 22761 Hamburg, Germany
- Department of Chemistry, Dalhousie University, B3H 4R2 Halifax, Canada
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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29
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Chowdhury SN, Huo P. Non-adiabatic Matsubara dynamics and non-adiabatic ring-polymer molecular dynamics. J Chem Phys 2021; 154:124124. [PMID: 33810665 DOI: 10.1063/5.0042136] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
Abstract
We present the non-adiabatic Matsubara dynamics, a general framework for computing the time-correlation function (TCF) of electronically non-adiabatic systems. This new formalism is derived based on the generalized Kubo-transformed TCF using the Wigner representation for both the nuclear degrees of freedom and the electronic mapping variables. By dropping the non-Matsubara nuclear normal modes in the quantum Liouvillian and explicitly integrating these modes out from the expression of the TCF, we derived the non-adiabatic Matsubara dynamics approach. Further making the approximation to drop the imaginary part of the Matsubara Liouvillian and enforce the nuclear momentum integral to be real, we arrived at the non-adiabatic ring-polymer molecular dynamics (NRPMD) approach. We have further justified the capability of NRPMD for simulating the non-equilibrium TCF. This work provides the rigorous theoretical foundation for several recently proposed state-dependent RPMD approaches and offers a general framework for developing new non-adiabatic quantum dynamics methods in the future.
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Affiliation(s)
- Sutirtha N Chowdhury
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
| | - Pengfei Huo
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
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30
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Gao X, Geva E. Improving the Accuracy of Quasiclassical Mapping Hamiltonian Methods by Treating the Window Function Width as an Adjustable Parameter. J Phys Chem A 2020; 124:11006-11016. [DOI: 10.1021/acs.jpca.0c09750] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xing Gao
- School of Materials, Sun Yat-sen University, Shenzhen, Guangdong 518100, China
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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31
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Kim HW, Rhee YM. Two-oscillator mapping modification of the Poisson bracket mapping equation formulation of the quantum-classical Liouville equation. J Chem Phys 2020; 153:214103. [PMID: 33291890 DOI: 10.1063/5.0027799] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Abstract
Mapping basis solutions provide efficient ways for simulating mixed quantum-classical (MQC) dynamics in complex systems by matching multiple quantum states of interest to some fictitious physical states. Recently, various MQC methods were devised such that two harmonic oscillators are employed to represent each electronic state, showing improvements over one-oscillator-based methods. Here, we introduce and analyze newly modified mapping approximations of the quantum-classical Liouville equation (QCLE) using two oscillators for each electronic state. We design two separate mapping relations that we can adopt toward simulating dynamics and computing expectation values. Through the process, two MQC methods can be constructed, one of which actually reproduces the population dynamics of the forward and backward trajectory solution of QCLE. By applying the methods to spin-boson systems with a range of parameters, we find out that the choice of mapping relations greatly affects the simulation results. We also show that further improvement is possible through using modified identity operator formulations. Our findings may be helpful in constructing improved MQC methods in the future.
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Affiliation(s)
- Hyun Woo Kim
- Center for Molecular Modeling and Simulation, Korea Research Institute of Chemical Technology (KRICT), Daejeon 34114, South Korea
| | - Young Min Rhee
- Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, South Korea
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32
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Mannouch JR, Richardson JO. A partially linearized spin-mapping approach for nonadiabatic dynamics. I. Derivation of the theory. J Chem Phys 2020; 153:194109. [DOI: 10.1063/5.0031168] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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33
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Mannouch JR, Richardson JO. A partially linearized spin-mapping approach for nonadiabatic dynamics. II. Analysis and comparison with related approaches. J Chem Phys 2020; 153:194110. [DOI: 10.1063/5.0031173] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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34
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Gao X, Lai Y, Geva E. Simulating Absorption Spectra of Multiexcitonic Systems via Quasiclassical Mapping Hamiltonian Methods. J Chem Theory Comput 2020; 16:6465-6480. [DOI: 10.1021/acs.jctc.0c00709] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xing Gao
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Yifan Lai
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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35
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Gao X, Geva E. A Nonperturbative Methodology for Simulating Multidimensional Spectra of Multiexcitonic Molecular Systems via Quasiclassical Mapping Hamiltonian Methods. J Chem Theory Comput 2020; 16:6491-6502. [DOI: 10.1021/acs.jctc.0c00843] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Xing Gao
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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36
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Liu Y, Gao X, Lai Y, Mulvihill E, Geva E. Electronic Dynamics through Conical Intersections via Quasiclassical Mapping Hamiltonian Methods. J Chem Theory Comput 2020; 16:4479-4488. [DOI: 10.1021/acs.jctc.0c00177] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Yudan Liu
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Xing Gao
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Yifan Lai
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Ellen Mulvihill
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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37
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Gao X, Saller MAC, Liu Y, Kelly A, Richardson JO, Geva E. Benchmarking Quasiclassical Mapping Hamiltonian Methods for Simulating Electronically Nonadiabatic Molecular Dynamics. J Chem Theory Comput 2020; 16:2883-2895. [DOI: 10.1021/acs.jctc.9b01267] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xing Gao
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | | | - Yudan Liu
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Aaron Kelly
- Department of Chemistry, Dalhousie University, 15000 Halifax, Nova Scotia, Canada
| | | | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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38
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Runeson JE, Richardson JO. Generalized spin mapping for quantum-classical dynamics. J Chem Phys 2020; 152:084110. [DOI: 10.1063/1.5143412] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Affiliation(s)
- Johan E. Runeson
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
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39
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Heller ER, Richardson JO. Instanton formulation of Fermi’s golden rule in the Marcus inverted regime. J Chem Phys 2020; 152:034106. [DOI: 10.1063/1.5137823] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Eric R. Heller
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
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40
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Saller MAC, Kelly A, Richardson JO. Improved population operators for multi-state nonadiabatic dynamics with the mixed quantum-classical mapping approach. Faraday Discuss 2020; 221:150-167. [DOI: 10.1039/c9fd00050j] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Application to the 7-state Frenkel-exciton Hamiltonian for the Fenna–Matthews–Olson complex shows that using a different representation of the electronic population operators can drastically improve the accuracy of the quasiclassical mapping approach without increasing the computational effort.
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Affiliation(s)
| | - Aaron Kelly
- Department of Chemistry
- Dalhousie University
- Halifax
- Canada
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41
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Kelly A. Exciton dissociation and charge separation at donor–acceptor interfaces from quantum-classical dynamics simulations. Faraday Discuss 2020; 221:547-563. [DOI: 10.1039/c9fd00069k] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Nonadiabatic dynamics simulations based on the quantum-classical Liouville equation are employed to study the real-time dynamics of exciton dissociation and charge separation at a model donor–acceptor interface.
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Affiliation(s)
- Aaron Kelly
- Department of Chemistry
- Dalhousie University
- Halifax
- Canada
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42
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Zheng J, Xie Y, Jiang S, Long Y, Ning X, Lan Z. Initial sampling in symmetrical quasiclassical dynamics based on Li-Miller mapping Hamiltonian. Phys Chem Chem Phys 2019; 21:26502-26514. [PMID: 31777888 DOI: 10.1039/c9cp03975a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
A symmetrical quasiclassical (SQC) dynamics approach based on the Li-Miller (LM) mapping Hamiltonian (SQC-LM) was employed to describe nonadiabatic dynamics. In principle, the different initial sampling procedures may be applied in the SQC-LM dynamics, and the results may be dependent on different initial sampling. We provided various initial sampling approaches and checked their influence. We selected two groups of models including site-exciton models for exciton dynamics and linear vibronic coupling models for conical intersections to test the performance of SQC-LM dynamics with the different initial sampling methods. The results were examined with respect to those of the accurate multiconfigurational time-dependent Hartree (MCTDH) quantum dynamics. For both the models, the SQC-LM method more-or-less gives a reasonable description of the population dynamics, while the influence of the initial sampling approaches on the final results is noticeable. It seems that the suitable initial sampling methods should be determined by the system under study. This indicates that the combination of the SQC-LM method with a suitable sampling approach may be a potential method in the description of nonadiabatic dynamics.
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Affiliation(s)
- Jie Zheng
- Industrial Research Institute of Nonwovens & Technical Textiles, College of Textiles Clothing, Qingdao University, Qingdao 266071, China.
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43
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Zhou W, Mandal A, Huo P. Quasi-Diabatic Scheme for Nonadiabatic On-the-Fly Simulations. J Phys Chem Lett 2019; 10:7062-7070. [PMID: 31665889 DOI: 10.1021/acs.jpclett.9b02747] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
We use the quasi-diabatic (QD) propagation scheme to perform on-the-fly nonadiabatic simulations of the photodynamics of ethylene. The QD scheme enables a seamless interface between accurate diabatic-based quantum dynamics approaches and adiabatic electronic structure calculations, explicitly avoiding any efforts to construct global diabatic states or reformulate the diabatic dynamics approach to the adiabatic representation. Using the partial linearized path-integral approach and the symmetrical quasi-classical approach as the diabatic dynamics methods, the QD propagation scheme enables direct nonadiabatic simulation with complete active space self-consistent field on-the-fly electronic structure calculations. The population dynamics obtained from both approaches are in a close agreement with the quantum wavepacket-based method and outperform the widely used trajectory surface-hopping approach. Further analysis of the ethylene photodeactivation pathways demonstrates the correct predictions of competing processes of nonradiative relaxation mechanism through various conical intersections. This work provides the foundation of using accurate diabatic dynamics approaches and on-the-fly adiabatic electronic structure information to perform ab initio nonadiabatic simulation.
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Affiliation(s)
- Wanghuai Zhou
- Advanced Functional Material and Photoelectric Technology Research Institution, School of Science , Hubei University of Automotive Technology , Shiyan , Hubei 442002 , People's Republic of China
- Department of Chemistry , University of Rochester , 120 Trustee Road , Rochester , New York 14627 , United States
| | - Arkajit Mandal
- Department of Chemistry , University of Rochester , 120 Trustee Road , Rochester , New York 14627 , United States
| | - Pengfei Huo
- Department of Chemistry , University of Rochester , 120 Trustee Road , Rochester , New York 14627 , United States
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44
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Mulvihill E, Gao X, Liu Y, Schubert A, Dunietz BD, Geva E. Combining the mapping Hamiltonian linearized semiclassical approach with the generalized quantum master equation to simulate electronically nonadiabatic molecular dynamics. J Chem Phys 2019; 151:074103. [DOI: 10.1063/1.5110891] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Ellen Mulvihill
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Xing Gao
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Yudan Liu
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Alexander Schubert
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
- Department of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, USA
| | - Barry D. Dunietz
- Department of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, USA
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
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45
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Runeson JE, Richardson JO. Spin-mapping approach for nonadiabatic molecular dynamics. J Chem Phys 2019; 151:044119. [DOI: 10.1063/1.5100506] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Johan E. Runeson
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
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46
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He X, Liu J. A new perspective for nonadiabatic dynamics with phase space mapping models. J Chem Phys 2019; 151:024105. [DOI: 10.1063/1.5108736] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Xin He
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Jian Liu
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
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47
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Chowdhury SN, Huo P. State dependent ring polymer molecular dynamics for investigating excited nonadiabatic dynamics. J Chem Phys 2019; 150:244102. [DOI: 10.1063/1.5096276] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Sutirtha N. Chowdhury
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
| | - Pengfei Huo
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
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