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For: Li W, Ren J, Shuai Z. Numerical assessment for accuracy and GPU acceleration of TD-DMRG time evolution schemes. J Chem Phys 2020;152:024127. [PMID: 31941314 DOI: 10.1063/1.5135363] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]  Open
Number Cited by Other Article(s)
1
Le Dé B, Jaouadi A, Mangaud E, Chin AW, Desouter-Lecomte M. Managing temperature in open quantum systems strongly coupled with structured environments. J Chem Phys 2024;160:244102. [PMID: 38913841 DOI: 10.1063/5.0214051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Accepted: 06/06/2024] [Indexed: 06/26/2024]  Open
2
Hino K, Kurashige Y. Encoding a Many-Body Potential Energy Surface into a Grid-Based Matrix Product Operator. J Chem Theory Comput 2024;20:3839-3849. [PMID: 38647101 DOI: 10.1021/acs.jctc.4c00046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/25/2024]
3
Xiang C, Jia W, Fang WH, Li Z. Distributed Multi-GPU Ab Initio Density Matrix Renormalization Group Algorithm with Applications to the P-Cluster of Nitrogenase. J Chem Theory Comput 2024;20:775-786. [PMID: 38198503 DOI: 10.1021/acs.jctc.3c01228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2024]
4
Li G, Shi Z, Guo X, Wang L. What is Missing in the Mean Field Description of Spatial Distribution of Population? Important Role of Auxiliary Wave Packets in Trajectory Branching. J Phys Chem Lett 2023;14:9855-9863. [PMID: 37890155 DOI: 10.1021/acs.jpclett.3c02690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/29/2023]
5
Yang H, Li W, Ren J, Shuai Z. Time-Dependent Density Matrix Renormalization Group Method for Quantum Transport with Phonon Coupling in Molecular Junction. J Chem Theory Comput 2023;19:6070-6081. [PMID: 37669099 DOI: 10.1021/acs.jctc.3c00340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/06/2023]
6
Xu Y, Cheng Y, Song Y, Ma H. New Density Matrix Renormalization Group Approaches for Strongly Correlated Systems Coupled with Large Environments. J Chem Theory Comput 2023. [PMID: 37471519 DOI: 10.1021/acs.jctc.2c01316] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/22/2023]
7
Lyu N, Mulvihill E, Soley MB, Geva E, Batista VS. Tensor-Train Thermo-Field Memory Kernels for Generalized Quantum Master Equations. J Chem Theory Comput 2023;19:1111-1129. [PMID: 36719350 DOI: 10.1021/acs.jctc.2c00892] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
8
Komarova K. Density Matrix via Few Dominant Observables for the Ultrafast Non-Radiative Decay in Pyrazine. J Chem Theory Comput 2023;19:746-757. [PMID: 36657738 PMCID: PMC11137821 DOI: 10.1021/acs.jctc.2c01211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Indexed: 01/21/2023]
9
Lin K, Peng J, Xu C, Gu FL, Lan Z. Automatic Evolution of Machine-Learning-Based Quantum Dynamics with Uncertainty Analysis. J Chem Theory Comput 2022;18:5837-5855. [DOI: 10.1021/acs.jctc.2c00702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
10
Ge Y, Li W, Ren J, Shuai Z. Computational Method for Evaluating the Thermoelectric Power Factor for Organic Materials Modeled by the Holstein Model: A Time-Dependent Density Matrix Renormalization Group Formalism. J Chem Theory Comput 2022;18:6437-6446. [PMID: 36174220 DOI: 10.1021/acs.jctc.2c00651] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
11
Wang Y, Ren J, Li W, Shuai Z. Hybrid Quantum-Classical Boson Sampling Algorithm for Molecular Vibrationally Resolved Electronic Spectroscopy with Duschinsky Rotation and Anharmonicity. J Phys Chem Lett 2022;13:6391-6399. [PMID: 35802770 DOI: 10.1021/acs.jpclett.2c01475] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
12
Lyu N, Soley MB, Batista VS. Tensor-Train Split-Operator KSL (TT-SOKSL) Method for Quantum Dynamics Simulations. J Chem Theory Comput 2022;18:3327-3346. [PMID: 35649210 DOI: 10.1021/acs.jctc.2c00209] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
13
Hino K, Kurashige Y. Matrix Product State Formulation of the MCTDH Theory in Local Mode Representations for Anharmonic Potentials. J Chem Theory Comput 2022;18:3347-3356. [PMID: 35606892 DOI: 10.1021/acs.jctc.2c00243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
14
Li W, Ren J, Yang H, Shuai Z. On the fly swapping algorithm for ordering of degrees of freedom in density matrix renormalization group. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2022;34:254003. [PMID: 35378514 DOI: 10.1088/1361-648x/ac640e] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2022] [Accepted: 04/04/2022] [Indexed: 06/14/2023]
15
Ren J, Li W, Jiang T, Wang Y, Shuai Z. Time‐dependent density matrix renormalization group method for quantum dynamics in complex systems. WIRES COMPUTATIONAL MOLECULAR SCIENCE 2022. [DOI: 10.1002/wcms.1614] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
16
Xu Y, Xie Z, Xie X, Schollwöck U, Ma H. Stochastic Adaptive Single-Site Time-Dependent Variational Principle. JACS AU 2022;2:335-340. [PMID: 35252984 PMCID: PMC8889605 DOI: 10.1021/jacsau.1c00474] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Indexed: 06/14/2023]
17
Baiardi A, Grimmel SA, Steiner M, Türtscher PL, Unsleber JP, Weymuth T, Reiher M. Expansive Quantum Mechanical Exploration of Chemical Reaction Paths. Acc Chem Res 2022;55:35-43. [PMID: 34918903 DOI: 10.1021/acs.accounts.1c00472] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
18
Komarova K, Remacle F, Levine RD. Compacting the density matrix in quantum dynamics: Singular value decomposition of the surprisal and the dominant constraints for anharmonic systems. J Chem Phys 2021;155:204110. [PMID: 34852474 DOI: 10.1063/5.0072351] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
19
Ren JJ, Wang YH, Li WT, Jiang T, Shuai ZG. Time-dependent density matrix renormalization group coupled with n-mode representation potentials for the excited state radiationless decay rate: Formalism and application to azulene. CHINESE J CHEM PHYS 2021. [DOI: 10.1063/1674-0068/cjcp2108138] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
20
Jiang T, Ren J, Shuai Z. Chebyshev Matrix Product States with Canonical Orthogonalization for Spectral Functions of Many-Body Systems. J Phys Chem Lett 2021;12:9344-9352. [PMID: 34549961 DOI: 10.1021/acs.jpclett.1c02688] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
21
Li W, Ren J, Shuai Z. A general charge transport picture for organic semiconductors with nonlocal electron-phonon couplings. Nat Commun 2021;12:4260. [PMID: 34253724 PMCID: PMC8275621 DOI: 10.1038/s41467-021-24520-y] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Accepted: 06/22/2021] [Indexed: 11/16/2022]  Open
22
Zhai H, Chan GKL. Low communication high performance ab initio density matrix renormalization group algorithms. J Chem Phys 2021;154:224116. [DOI: 10.1063/5.0050902] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
23
Wang Y, Ren J, Shuai Z. Evaluating the anharmonicity contributions to the molecular excited state internal conversion rates with finite temperature TD-DMRG. J Chem Phys 2021;154:214109. [PMID: 34240969 DOI: 10.1063/5.0052804] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
24
Yan Y, Xu M, Li T, Shi Q. Efficient propagation of the hierarchical equations of motion using the Tucker and hierarchical Tucker tensors. J Chem Phys 2021;154:194104. [PMID: 34240893 DOI: 10.1063/5.0050720] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
25
Peng J, Xie Y, Hu D, Lan Z. Analysis of bath motion in MM-SQC dynamics via dimensionality reduction approach: Principal component analysis. J Chem Phys 2021;154:094122. [PMID: 33685149 DOI: 10.1063/5.0039743] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
26
Yan Y, Xing T, Shi Q. A new method to improve the numerical stability of the hierarchical equations of motion for discrete harmonic oscillator modes. J Chem Phys 2020;153:204109. [DOI: 10.1063/5.0027962] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
27
Shuai Z, Li W, Ren J, Jiang Y, Geng H. Applying Marcus theory to describe the carrier transports in organic semiconductors: Limitations and beyond. J Chem Phys 2020;153:080902. [PMID: 32872875 DOI: 10.1063/5.0018312] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]  Open
28
Ren J, Li W, Jiang T, Shuai Z. A general automatic method for optimal construction of matrix product operators using bipartite graph theory. J Chem Phys 2020;153:084118. [PMID: 32872857 DOI: 10.1063/5.0018149] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]  Open
29
Shuai Z. Thermal Vibration Correlation Function Formalism for Molecular Excited State Decay Rates. CHINESE J CHEM 2020. [DOI: 10.1002/cjoc.202000226] [Citation(s) in RCA: 48] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
30
Li W, Ren J, Shuai Z. Finite-Temperature TD-DMRG for the Carrier Mobility of Organic Semiconductors. J Phys Chem Lett 2020;11:4930-4936. [PMID: 32492339 DOI: 10.1021/acs.jpclett.0c01072] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
31
Jiang T, Li W, Ren J, Shuai Z. Finite Temperature Dynamical Density Matrix Renormalization Group for Spectroscopy in Frequency Domain. J Phys Chem Lett 2020;11:3761-3768. [PMID: 32316732 DOI: 10.1021/acs.jpclett.0c00905] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
32
Zheng J, Peng J, Xie Y, Long Y, Ning X, Lan Z. Study of the exciton dynamics in perylene bisimide (PBI) aggregates with symmetrical quasiclassical dynamics based on the Meyer–Miller mapping Hamiltonian. Phys Chem Chem Phys 2020;22:18192-18204. [DOI: 10.1039/d0cp00648c] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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