Toward probing of the local electron–phonon interaction in small-molecule organic semiconductors with Raman spectroscopy

Probing of nucleic acid compaction using low-frequency Raman spectroscopy

Compaction of nucleic acids, namely DNA and RNA, determines their functions and involvement in vital cell processes including transcription, replication, DNA repair and translation. However, experimental probing of the compaction of nucleic acids is not straightforward. In this study, we suggest an approach for this probing using low-frequency Raman spectroscopy. Specifically, we show theoretically, computationally and experimentally the quantifiable correlation between the low-frequency Raman intensity from nucleic acids, magnitude of thermal fluctuations of atomic positions, and the compaction state of biomolecules. Noteworthily, we highlight that the LF Raman intensity differs by an order of magnitude for different samples of DNA, and even for the same sample in the course of long-term storage. The feasibility of the approach is further shown by assessment of the DNA compaction in the nuclei of plant cells. We anticipate that the suggested approach will enlighten compaction of nucleic acids and their dynamics during the key processes of the cell life cycle and under various factors, facilitating advancement of molecular biology and medicine.

High-Mobility Naphthalene Diimide Derivatives Revealed by Raman-Based In Silico Screening

Charge transport in crystalline organic semiconductors (OSCs) is considerably hindered by low-frequency vibrations introducing dynamic disorder in the charge transfer integrals. Recently, we have shown that the contributions of various vibrational modes to the dynamic disorder correlate with their Raman intensities and suggested a Raman-based approach for estimation of the dynamic disorder and search for potentially high-mobility OSCs. In the present paper, we showcase this approach by revealing the highest-mobility OSC(s) in two series of crystalline naphthalene diimide derivatives bearing alkyl or cycloalkyl substituents. In contrast to our previous studies, Raman spectra are not measured, but are instead calculated using periodic DFT. As a result, an OSC with a potentially high charge mobility is revealed in each of the two series, and further mobility calculations corroborate this choice. Namely, for the naphthalene diimide derivatives with butyl and cyclopentyl substituents, the estimated room-temperature isotropic electron mobilities are as high as 6 and 15 cm2 V-1 s-1, respectively, in the latter case even exceeding 20 cm2 V-1 s-1 in a two-dimensional plane. Thus, our results highlight the potential of using the calculated Raman spectra to search for high-mobility crystalline OSCs and reveal two promising OSCs, which were previously overlooked.

Substituent Effect on Vibrationally Resolved Absorption Spectra and Exciton Dynamics of Dipyrrolonaphthyridinedione Aggregates

Dipyrrolonaphthyridinedione (DPND) thin films exhibit interesting photophysical properties and singlet fission (SF) processes. A recent experimental work found that the alkyl substitution in the DPND skeleton has the remarkable influence on the characteristics of electronic absorption spectra and SF rates. Here, we theoretically elucidate the microscopic mechanism of the substituent effect on the optical properties and exciton dynamics of materials by combining the electronic structure calculations and the quantum dynamics simulations. The results show that the alkyl substituent has a minor effect on the single molecular properties but dramatically changes those of DPND aggregates via varying the intermolecular interactions. The aggregates of DPND with and without alkyl side chains exhibit the more likely characters of H-type aggregations. In the former (DPND6), the weak degree of mixing of intramolecular localized excited (LE) states and intermolecular charge transfer (CT) states makes the low-energy absorption band possess the predominant optical absorption, while in the latter (DPND), the CT and LE states are close in energy, together with their strong interaction, resulting in the substantial state-mixing, so that its two low-energy absorption bands have nearly equal oscillator strengths and a wide energy spacing of more than 0.5 eV. The simulation of exciton dynamics elucidates that the photoinitiated states in both aggregates cannot generate the free charge carrier because of the lack of enough driving forces. However, the population exchanges between LE and CT states in DPND aggregates are much faster than in DPND6 aggregates, indicating the different SF behaviors, consistent with the experimental observation.

Suppression of dynamic disorder by electrostatic interactions in structurally close organic semiconductors

Dynamic disorder manifested in fluctuations of charge transfer integrals considerably hinders charge transport in high-mobility organic semiconductors. Accordingly, strategies for suppression of the dynamic disorder are highly desirable. In this study, we suggest a novel promising strategy for suppression of dynamic disorder-tuning the molecular electrostatic potential. Specifically, we show that the intensities of the low-frequency (LF) Raman spectra for crystalline organic semiconductors consisting of π-isoelectronic small molecules (i.e. bearing the same number of π electrons)-benzothieno[3,2-b][1]benzothiophene (BTBT), chrysene, tetrathienoacene (TTA) and naphtho[1,2-b:5,6-b']dithiophene (NDT)-differ significantly, indicating significant differences in the dynamic disorder. This difference is explained by suppression of the dynamic disorder in chrysene and NDT because of stronger intermolecular electrostatic interactions. As a result, guidelines for the increase of the crystal rigidity for the rational design of high-mobility organic semiconductors are suggested.