Modulating internal transition kinetics of responsive macromolecules by collective crowding

External field-driven property localization in liquids of responsive macromolecules

We explore theoretically the effects of external potentials on the spatial distribution of particle properties in a liquid of explicitly responsive macromolecules. In particular, we focus on the bistable particle size as a coarse-grained internal degree of freedom (DoF, or "property"), σ, that moves in a bimodal energy landscape, in order to model the response of a state-switching (big-to-small) macromolecular liquid to external stimuli. We employ a mean-field density functional theory (DFT) that provides the full inhomogeneous equilibrium distributions of a one-component model system of responsive colloids (RCs) interacting with a Gaussian pair potential. For systems confined between two parallel hard walls, we observe and rationalize a significant localization of the big particle state close to the walls, with pressures described by an exact RC wall theorem. Application of more complex external potentials, such as linear (gravitational), osmotic, and Hamaker potentials, promotes even stronger particle size segregation, in which macromolecules of different size are localized in different spatial regions. Importantly, we demonstrate how the degree of responsiveness of the particle size and its coupling to the external potential tune the position-dependent size distribution. The DFT predictions are corroborated by Brownian dynamics simulations. Our study highlights the fact that particle responsiveness can be used to localize liquid properties and therefore helps to control the property- and position-dependent function of macromolecules, e.g., in biomedical applications.

Liquid structure of bistable responsive macromolecules using mean-field density-functional theory

Macromolecular crowding typically applies to biomolecular and polymer-based systems in which the individual particles often feature a two-state folded/unfolded or coil-to-globule transition, such as found for proteins and peptides, DNA and RNA, or supramolecular polymers. Here, we employ a mean-field density functional theory (DFT) of a model of soft and bistable responsive colloids (RCs) in which the size of the macromolecule is explicitly resolved as a degree of freedom living in a bimodal 'Landau' energy landscape (exhibiting big and small states), thus directly responding to the crowding environment. Using this RC-DFT we study the effects of self-crowding on the liquid bulk structure and thermodynamics for different energy barriers and softnesses of the bimodal energy landscape, in conditions close to the coil-to-globule transition. We find substantial crowding effects on the internal distributions, a complex polydispersity behavior, and quasi-universal compression curves for increasing (generalized) packing fractions. Moreover, we uncover distinct signatures of bimodal versus unimodal behavior in the particle compression. Finally, the analysis of the pair structure - derived from the test particle route - reveals that the microstructure of the liquid is quite inhomogeneous due to local depletion effects, tuneable by particle softness.

Perspective: New directions in dynamical density functional theory

Classical dynamical density functional theory (DDFT) has become one of the central modeling approaches in nonequilibrium soft matter physics. Recent years have seen the emergence of novel and interesting fields of application for DDFT. In particular, there has been a remarkable growth in the amount of work related to chemistry. Moreover, DDFT has stimulated research on other theories such as phase field crystal models and power functional theory. In this perspective, we summarize the latest developments in the field of DDFT and discuss a variety of possible directions for future research.

Active responsive colloids driven by intrinsic dichotomous noise

We study the influence of intrinsic noise on the structure and dynamics of responsive colloids (RCs), which actively change their size and mutual interactions. The colloidal size is explicitly resolved in our RC model as an internal degree of freedom (DOF) in addition to the particle translation. A Hertzian pair potential between the RCs leads to repulsion and shrinking of the particles, resulting in an explicit responsiveness of the system to self-crowding. To render the colloids active, their size is internally driven by a dichotomous noise, randomly switching ("breathing") between growing and shrinking states with a predefined rate, as motivated by recent experiments on synthetic active colloids. The polydispersity of this dichotomous active responsive colloid (D-ARC) model can be tuned by the parameters of the noise. Utilizing stochastic computer simulations, we study crowding effects on the spatial distributions, relaxation times, and self-diffusion of dense suspensions of the D-ARCs. We find a substantial influence of the "built-in" intrinsic noise on the system's behavior, in particular, transitions from unimodal to bimodal size distributions for an increasing colloid density as well as intrinsic noise-modified diffusive translational dynamics. We conclude that controlling the noise of internal DOFs of a macromolecule or cell is a powerful tool for active colloidal materials to enable autonomous changes in the system's collective structure and dynamics towards the adaptation of macroscopic properties to external perturbations.

Active responsive colloids coupled to different thermostats

We introduce a model of active responsive colloids (ARCs) in which an internal degree of freedom (DoF) of a single colloidal particle is "activated" by coupling it to a different thermostat than for the translational DoFs. As for the responsive internal DoF, we consider specifically the size (diameter) of the spherical particles, which is confined by a harmonic parent potential being either entropic or energetic in nature. The ARCs interact via a repulsive Hertzian pair potential, appropriate to model hydrogels or elastic colloids, and are studied for various densities using Brownian dynamics simulations. We tune the internal activity in the nonequilibrium steady state by scanning through a wide range of internal temperatures, both smaller ("colder") and larger ("hotter") than the translational temperature. The results show a rich and intriguing behavior for the emergent property distributions, colloidal pair structure, and the diffusive translational dynamics controlled by the internal activity, substantially depending on whether the internal DoF moves in an entropic or energetic potential. We discuss theoretical thermal limits and phenomenological models which can explain some of the nonequilibrium trends qualitatively. Our study indicates that particle dynamical polydispersity as well as the structure and dynamics of dense macromolecular suspensions can be vastly tuned by internal activity in terms of internal "hot" or "cold" fluctuating states.