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Mayer M, Vankova N, Stolz F, Abel B, Heine T, Asmis KR. Identification of a Two‐Coordinate Iron(I)–Oxalate Complex. Angew Chem Int Ed Engl 2022; 61:e202117855. [PMID: 35088489 PMCID: PMC9303725 DOI: 10.1002/anie.202117855] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Indexed: 12/16/2022]
Abstract
Exotic oxidation states of the first‐row transition metals have recently attracted much interest. In order to investigate the oxidation states of a series of iron–oxalate complexes, an aqueous solution of iron(III) nitrate and oxalic acid was studied by infrared free liquid matrix‐assisted laser desorption/ionization as well as ionspray mass spectrometry. Here, we show that iron is not only detected in its common oxidation states +II and +III, but also in its unusual oxidation state +I, detectable in both positive‐ion and in negative‐ion modes, respectively. Vibrational spectra of the gas phase anionic iron oxalate complexes [FeIII(C2O4)2]−, [FeII(C2O4)CO2]−, and [FeI(C2O4)]− were measured by means of infrared photodissociation spectroscopy and their structures were assigned by comparison to anharmonic vibrational spectra based on second‐order perturbation theory.
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Affiliation(s)
- Martin Mayer
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
| | - Nina Vankova
- Theoretische Chemie Technische Universität Dresden Bergstr. 66c 01062 Dresden Germany
| | - Ferdinand Stolz
- Leibniz Institute for Surface Engineering (IOM) Permoserstr. 15 04318 Leipzig Germany
| | - Bernd Abel
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
- Leibniz Institute for Surface Engineering (IOM) Permoserstr. 15 04318 Leipzig Germany
| | - Thomas Heine
- Theoretische Chemie Technische Universität Dresden Bergstr. 66c 01062 Dresden Germany
- Helmholtz-Zentrum Dresden-Rossendorf Forschungsstelle Leipzig Permoserstr. 15 04318 Leipzig Germany
- Department of Chemistry Yonsei University Seodaemun-gu, Seoul 120-749 Republic of Korea
| | - Knut R. Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
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2
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Mayer M, Vankova N, Stolz F, Abel B, Heine T, Asmis KR. Identification of a Two‐Coordinate Iron(I)‐Oxalate Complex. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202117855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Martin Mayer
- Universität Leipzig: Universitat Leipzig Wilhelm-Ostwald-Institut GERMANY
| | - Nina Vankova
- Technische Universität Dresden: Technische Universitat Dresden Theoretische Chemie GERMANY
| | - Ferdinand Stolz
- Leibniz Institute for Surface Modification: Leibniz-Institut fur Oberflachenmodifizierung eV Chemistry GERMANY
| | - Bernd Abel
- Leibniz Institute for Surface Modification: Leibniz-Institut fur Oberflachenmodifizierung eV Chemistry GERMANY
| | - Thomas Heine
- TU Dresden: Technische Universitat Dresden Theoretische Chemie GERMANY
| | - Knut R Asmis
- Universitat Leipzig Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie Linnéstr. 2 04103 Leipzig GERMANY
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3
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Prüfert C, Villatoro J, Zühlke M, Beitz T, Löhmannsröben HG. Liquid phase IR-MALDI and differential mobility analysis of nano- and sub-micron particles. Phys Chem Chem Phys 2022; 24:2275-2286. [PMID: 35014991 DOI: 10.1039/d1cp04196g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Infrared matrix-assisted desorption and ionization (IR-MALDI) enables the transfer of sub-micron particles (sMP) directly from suspensions into the gas phase and their characterization with differential mobility (DM) analysis. A nanosecond laser pulse at 2940 nm induces a phase explosion of the aqueous phase, dispersing the sample into nano- and microdroplets. The particles are ejected from the aqueous phase and become charged. Using IR-MALDI on sMP of up to 500 nm in diameter made it possible to surpass the 100 nm size barrier often encountered when using nano-electrospray for ionizing supramolecular structures. Thus, the charge distribution produced by IR-MALDI could be characterized systematically in the 50-500 nm size range. Well-resolved signals for up to octuply charged particles were obtained in both polarities for different particle sizes, materials, and surface modifications spanning over four orders of magnitude in concentrations. The physicochemical characterization of the IR-MALDI process was done via a detailed analysis of the charge distribution of the emerging particles, qualitatively as well as quantitatively. The Wiedensohler charge distribution, which describes the evolution of particle charging events in the gas phase, and a Poisson-derived charge distribution, which describes the evolution of charging events in the liquid phase, were compared with one another with respect to how well they describe the experimental data. Although deviations were found in both models, the IR-MALDI charging process seems to resemble a Poisson-like charge distribution mechanism, rather than a bipolar gas phase charging one.
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Affiliation(s)
- C Prüfert
- University of Potsdam, Physical Chemistry, Karl-Liebknecht-Str. 24-25, Potsdam, Germany.
| | - J Villatoro
- University of Potsdam, Physical Chemistry, Karl-Liebknecht-Str. 24-25, Potsdam, Germany.
| | - M Zühlke
- University of Potsdam, Physical Chemistry, Karl-Liebknecht-Str. 24-25, Potsdam, Germany.
| | - T Beitz
- University of Potsdam, Physical Chemistry, Karl-Liebknecht-Str. 24-25, Potsdam, Germany.
| | - H-G Löhmannsröben
- University of Potsdam, Physical Chemistry, Karl-Liebknecht-Str. 24-25, Potsdam, Germany.
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Appun J, Stolz F, Naumov S, Abel B, Schneider C. Modular Synthesis of Dipyrroloquinolines: A Combined Synthetic and Mechanistic Study. J Org Chem 2018; 83:1737-1744. [PMID: 29355317 DOI: 10.1021/acs.joc.7b02466] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A straightforward synthesis of [1,2-a][3',2'-c]dipyrroloquinolines has been developed generating up to eight new σ-bonds and five new stereogenic centers in a simple and modular one-pot operation. Generally good to excellent yields and moderate to good stereoselectivities in favor of the all-cis stereoisomer were observed. A detailed investigation combining synthetic studies, analytical measurements, and theoretical calculations has been conducted to elucidate the reaction mechanism using ESI- and liquid-beam IR-laser desorption mass spectrometry as well as DFT calculations. Key steps of this sequential transformation include a Lewis acid-catalyzed vinylogous Mukaiyama-Mannich reaction of bis(silyl) dienediolate 1 and a Brønsted acid-promoted Mannich-Pictet-Spengler reaction cascade reaction to complete the synthesis of the dipyrroloquinoline core of the target compounds.
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Affiliation(s)
- Johannes Appun
- Institute of Organic Chemistry, University of Leipzig , Johannisallee 29, D-04103 Leipzig, Germany
| | - Ferdinand Stolz
- Leibniz-Institute of Surface Modification (IOM) , Permoserstrasse 15, D-04318 Leipzig, Germany.,Wilhelm-Ostwald-Institute for Physical and Theoretical Chemistry, University of Leipzig , Linnéstrasse 3, D-04103 Leipzig, Germany
| | - Sergej Naumov
- Leibniz-Institute of Surface Modification (IOM) , Permoserstrasse 15, D-04318 Leipzig, Germany
| | - Bernd Abel
- Wilhelm-Ostwald-Institute for Physical and Theoretical Chemistry, University of Leipzig , Linnéstrasse 3, D-04103 Leipzig, Germany
| | - Christoph Schneider
- Institute of Organic Chemistry, University of Leipzig , Johannisallee 29, D-04103 Leipzig, Germany
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Schulze S, Pahl M, Stolz F, Appun J, Abel B, Schneider C, Belder D. Liquid Beam Desorption Mass Spectrometry for the Investigation of Continuous Flow Reactions in Microfluidic Chips. Anal Chem 2017; 89:6175-6181. [PMID: 28489359 DOI: 10.1021/acs.analchem.7b01026] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In this work, we present the combination of microfluidic chips and mass spectrometry employing laser-induced liquid beam ionization/desorption. The developed system was evaluated with respect to stable beam generation and laser parameters as well as solvent compatibility. The device was exemplarily applied to study a vinylogous Mannich reaction performed in continuous flow on chip. Fast processes can be observed with this technique which in the future could be beneficial for studying intermediates or contribute to the elucidation of reaction mechanisms.
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Affiliation(s)
- Sandra Schulze
- Institute of Analytical Chemistry, University Leipzig , Linnéstraße 3, 04103 Leipzig, Germany
| | - Maik Pahl
- Institute of Analytical Chemistry, University Leipzig , Linnéstraße 3, 04103 Leipzig, Germany
| | - Ferdinand Stolz
- Wilhelm-Ostwald-Institute of Physical and Theoretical Chemistry, University Leipzig , Linnéstraße 3, 04103 Leipzig, Germany.,Leibniz Institute of Surface Modification (IOM) , Permoserstraße 15, 04318 Leipzig, Germany
| | - Johannes Appun
- Institute of Organic Chemistry, University Leipzig , Johannisallee 29, 04103 Leipzig, Germany
| | - Bernd Abel
- Wilhelm-Ostwald-Institute of Physical and Theoretical Chemistry, University Leipzig , Linnéstraße 3, 04103 Leipzig, Germany.,Leibniz Institute of Surface Modification (IOM) , Permoserstraße 15, 04318 Leipzig, Germany
| | - Christoph Schneider
- Institute of Organic Chemistry, University Leipzig , Johannisallee 29, 04103 Leipzig, Germany
| | - Detlev Belder
- Institute of Analytical Chemistry, University Leipzig , Linnéstraße 3, 04103 Leipzig, Germany
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Stolz F, Appun J, Naumov S, Schneider C, Abel B. A Complex Catalytic Reaction Caught in the Act: Intermediates and Products Sampling Online by Liquid μ-Beam Mass Spectrometry and Theoretical Modeling. Chempluschem 2016; 82:233-240. [PMID: 31961544 DOI: 10.1002/cplu.201600347] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2016] [Revised: 09/25/2016] [Indexed: 11/08/2022]
Abstract
Liquid-beam IR-laser desorption mass spectrometry has been used to monitor the reactants, intermediates, and products of a complex organic signature reaction in real time on multiple timescales directly from the liquid phase. The reaction was chosen because it has advantages in medicinal chemistry applications, and the three-component, modular construction provides a means to generate molecular diversity rapidly. Under Lewis acid catalysis, a vinylogous Mannich reaction was monitored as it generated a δ-amino-α-silyloxy-α,β-unsaturated ester, which upon hydrolysis to the corresponding α-keto ester spontaneously reacted in a [3+2] cycloannulation to the final pyrrolo[2,1-b]benzoxazole. The kinetic data were compared with predictions of quantum chemical calculations to elucidate and verify or exclude reaction pathways and mechanisms for a possible rational optimization of the reaction. The simplicity and rapid response of this approach make it a very powerful technique for online characterization of chemical reactions on timescales spanning several orders of magnitude. This enables full control over chemical reactions, thereby maximizing the product yield. This combined experimental and theoretical approach opens up a new route for the study of novel chemistry in liquid-phase reactions.
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Affiliation(s)
- Ferdinand Stolz
- Leibniz Institute of Surface Modification, Permoserstrasse 15, 04317, Leipzig, Germany
| | - Johannes Appun
- Institut für Organische Chemie, Universität Leipzig, Johannisalle 29, 04103, Leipzig, Germany
| | - Sergej Naumov
- Leibniz Institute of Surface Modification, Permoserstrasse 15, 04317, Leipzig, Germany
| | - Christoph Schneider
- Institut für Organische Chemie, Universität Leipzig, Johannisalle 29, 04103, Leipzig, Germany
| | - Bernd Abel
- Leibniz Institute of Surface Modification, Permoserstrasse 15, 04317, Leipzig, Germany.,Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103, Leipzig, Germany
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Carvalho TC, McConville JT. The function and performance of aqueous aerosol devices for inhalation therapy. ACTA ACUST UNITED AC 2016; 68:556-78. [PMID: 27061412 DOI: 10.1111/jphp.12541] [Citation(s) in RCA: 57] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2015] [Accepted: 02/05/2016] [Indexed: 12/11/2022]
Abstract
OBJECTIVES In this review paper, we explore the interaction between the functioning mechanism of different nebulizers and the physicochemical properties of the formulations for several types of devices, namely jet, ultrasonic and vibrating-mesh nebulizers; colliding and extruded jets; electrohydrodynamic mechanism; surface acoustic wave microfluidic atomization; and capillary aerosol generation. KEY FINDINGS Nebulization is the transformation of bulk liquids into droplets. For inhalation therapy, nebulizers are widely used to aerosolize aqueous systems, such as solutions and suspensions. The interaction between the functioning mechanism of different nebulizers and the physicochemical properties of the formulations plays a significant role in the performance of aerosol generation appropriate for pulmonary delivery. Certain types of nebulizers have consistently presented temperature increase during the nebulization event. Therefore, careful consideration should be given when evaluating thermo-labile drugs, such as protein therapeutics. We also present the general approaches for characterization of nebulizer formulations. SUMMARY In conclusion, the interplay between the dosage form (i.e. aqueous systems) and the specific type of device for aerosol generation determines the effectiveness of drug delivery in nebulization therapies, thus requiring extensive understanding and characterization.
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Affiliation(s)
- Thiago C Carvalho
- Bristol-Myers Squibb, Drug Product Science & Technology, New Brunswick, NJ, USA
| | - Jason T McConville
- Department of Pharmaceutical Sciences, University of New Mexico, Albuquerque, NM, USA
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Komatsu K, Nirasawa T, Hoshino-Nagasaka M, Kohno JY. Mechanism of Protein Molecule Isolation by IR Laser Ablation of Droplet Beam. J Phys Chem A 2016; 120:1495-500. [PMID: 26903000 DOI: 10.1021/acs.jpca.5b10873] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Gas-phase isolation of bovine serum albumin (BSA) from aqueous solutions is performed by IR laser ablation of a droplet beam. Multiply charged BSA ions (positive and negative) were produced by the IR laser irradiation onto a droplet beam of aqueous BSA solutions with various pH values prepared by addition of hydrochloric acid or sodium hydroxide to the solution. The isolation mechanism was discussed based on the charge state of the isolated BSA ions. A nanodroplet model explains the gas-phase charge distribution of the BSA ions. This study provides a fundamental basis for further studies of a wide variety of biomolecules in the gas phase isolated directly from solution.
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Affiliation(s)
- Kensuke Komatsu
- Department of Chemistry, Faculty of Science, Gakushuin University , 1-5-1 Mejiro, Toshima-ku, Tokyo 171-8588, Japan
| | - Takuya Nirasawa
- Department of Chemistry, Faculty of Science, Gakushuin University , 1-5-1 Mejiro, Toshima-ku, Tokyo 171-8588, Japan
| | - Mariko Hoshino-Nagasaka
- Department of Chemistry, Faculty of Science, Gakushuin University , 1-5-1 Mejiro, Toshima-ku, Tokyo 171-8588, Japan
| | - Jun-ya Kohno
- Department of Chemistry, Faculty of Science, Gakushuin University , 1-5-1 Mejiro, Toshima-ku, Tokyo 171-8588, Japan
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9
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Wiederschein F, Vöhringer-Martinez E, Beinsen A, Postberg F, Schmidt J, Srama R, Stolz F, Grubmüller H, Abel B. Charge separation and isolation in strong water droplet impacts. Phys Chem Chem Phys 2015; 17:6858-64. [PMID: 25672904 DOI: 10.1039/c4cp05618c] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Charge separation in condensed matter after strong impacts is a general and intriguing phenomenon in nature, which is often identified and described but not necessarily well understood in terms of a quantitative mechanistic picture. Here we show that charge separation naturally occurs if water droplets/clusters or ice particles with embedded charge carriers, e.g., ions, encounter a high energy impact with subsequent dispersion - even if the involved kinetic energy is significantly below the molecular ionization energy. We find that for low charge carrier concentrations (c < 0.01 mol L(-1)) a simple statistical Poisson model describes the charge distribution in the resulting molecular "fragments" or aggregates. At higher concentrations Coulomb interactions between the charge carriers become relevant, which we describe by a Monte Carlo approach. Our models are compared to experimental data for strong (laser) impacts on liquid micro beams and discussed for the charge generation in cluster-impact mass spectrometry on cosmic dust detectors where particle kinetic energies are below the plasma threshold. Taken together, a simple and intuitive but quantitative microscopic model is obtained, which may contribute to the understanding of a larger range of phenomena related to charge generation and separation in nature.
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Affiliation(s)
- F Wiederschein
- MPI für biophysikalische Chemie, Am Fassberg 11, 37077 Göttingen, Germany
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Kohno JY, Nabeta K, Sasaki N. Charge State of Lysozyme Molecules in the Gas Phase Produced by IR-Laser Ablation of Droplet Beam. J Phys Chem A 2012; 117:9-14. [DOI: 10.1021/jp3096506] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Jun-ya Kohno
- Department of Chemistry, Faculty of Science, Gakushuin University, 1-5-1 Mejiro, Toshima-ku, Tokyo
171-8588, Japan
| | - Kyohei Nabeta
- Department of Chemistry, Faculty of Science, Gakushuin University, 1-5-1 Mejiro, Toshima-ku, Tokyo
171-8588, Japan
| | - Nobuteru Sasaki
- Department of Chemistry, Faculty of Science, Gakushuin University, 1-5-1 Mejiro, Toshima-ku, Tokyo
171-8588, Japan
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11
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Maselli OJ, Gascooke JR, Lawrance WD, Buntine MA. The dynamics of evaporation from a liquid surface. Chem Phys Lett 2011. [DOI: 10.1016/j.cplett.2011.06.010] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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12
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Haas J, Vöhringer-Martinez E, Bögehold A, Matthes D, Hensen U, Pelah A, Abel B, Grubmüller H. Primary steps of pH-dependent insulin aggregation kinetics are governed by conformational flexibility. Chembiochem 2009; 10:1816-22. [PMID: 19533727 DOI: 10.1002/cbic.200900266] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Insulin aggregation critically depends on pH. The underlying energetic and structural determinants are, however, unknown. Here, we measure the kinetics of the primary aggregation steps of the insulin monomer in vitro and relate it to its conformational flexibility. To assess these primary steps the monomer concentration was monitored by mass spectrometry at various pH values and aggregation products were imaged by atomic force microscopy. Lowering the pH from 3 to 1.6 markedly accelerated the observed aggregation kinetics. The influence of pH on the monomer structure and dynamics in solution was studied by molecular dynamics simulations, with the protonation states of the titrable groups obtained from electrostatic calculations. Reduced flexibility was observed for low pH values, mainly in the C terminus and in the helix of the B chain; these corresponded to an estimated entropy loss of 150 J mol(-1) K(-1). The striking correlation between entropy loss and pH value is consistent with the observed kinetic traces. In analogy to the well-known Phi value analysis, this result allows the extraction of structural information about the rate determining transition state of the primary aggregation steps. In particular, we suggest that the residues in the helix of the B chain are involved in this transition state.
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Affiliation(s)
- Jürgen Haas
- Department of Theoretical and Computational Biophysics, Max-Planck-Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Göttingen, Germany
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13
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Terasaki A, Kondow T. Dynamics of an argon cluster following impulsive excitation studied by molecular-dynamics simulation. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.04.043] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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14
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Rapp E, Charvát A, Beinsen A, Plessmann U, Reichl U, Seidel-Morgenstern A, Urlaub H, Abel B. Atmospheric pressure free liquid infrared MALDI mass spectrometry: toward a combined ESI/ MALDI-liquid chromatography interface. Anal Chem 2009; 81:443-52. [PMID: 19125446 DOI: 10.1021/ac801863p] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
A new atmospheric pressure (AP)-MALDI-type interface has been developed based on a free liquid (FL) microbeam/microdroplets and a mid-infrared optical parametric oscillator (mid-IR OPO). The device is integrated into a standard on-line nanoESI interface. The generation of molecular ions in the gas phase is believed to be the result of a fast (explosive) laser-induced evaporative dispersion(not desorption) of the microbeam into statistically charged nanodroplets. Only the lowest charge states appear insignificant abundance in this type of experiment. Mass spectra of some common peptides have been acquired in positive ion mode, and the limit-of-detection of this first prototype (liquid microbeam setup) was evaluated to be 17 fmol per second. To improve the duty cycle and to reduce the sample consumption, a droplet-on-demand system was implemented (generating 100 pL droplets).With this setup, about 20 attomole of bradykinin were sufficient to achieve a signal-to-noise ratio better than five.This setup can be operated at flow rates down to 100 nL/min and represents a liquid MALDI alternative to the nanoESI. Our particular interest was the application of the developed ion source for on-line coupling of liquid chromatography with mass spectrometry. The flow rates(>100 microL/min), required for stable operation of the ion source in continuous liquid microbeam mode, matches perfectly the flow rate range of micro HPLC. Therefore, online LC/MS experiments have been realized, employing a microbore C18 reversed-phase column to separate an artificial peptide mixture and tryptic peptides of bovine serum albumin (performing a peptide mass fingerprint). In the latter case, sequence coverage of more than 90%has been achieved.
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Affiliation(s)
- Erdmann Rapp
- Max Planck Institute for Dynamics of Complex Technical Systems, Sandtorstrasse 1, 39106 Magdeburg, Germany.
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15
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Kohno JY, Kondow T. UV laser induced proton-transfer of protein molecule in the gas phase produced by droplet-beam laser ablation. Chem Phys Lett 2008. [DOI: 10.1016/j.cplett.2008.08.032] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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16
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Morgner N, Kleinschroth T, Barth HD, Ludwig B, Brutschy B. A novel approach to analyze membrane proteins by laser mass spectrometry: from protein subunits to the integral complex. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2007; 18:1429-38. [PMID: 17544294 DOI: 10.1016/j.jasms.2007.04.013] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2007] [Revised: 04/20/2007] [Accepted: 04/24/2007] [Indexed: 05/15/2023]
Abstract
A novel laser-based mass spectrometry method termed LILBID (laser-induced liquid bead ion desorption) is applied to analyze large integral membrane protein complexes and their subunits. In this method the ions are IR-laser desorbed from aqueous microdroplets containing the hydrophobic protein complexes solubilized by detergent. The method is highly sensitive, very efficient in sample handling, relatively tolerant to various buffers, and detects the ions in narrow, mainly low-charge state distributions. The crucial experimental parameter determining whether the integral complex or its subunits are observed is the laser intensity: At very low intensity level corresponding to an ultrasoft desorption, the intact complexes, together with few detergent molecules, are transferred into vacuum. Under these conditions the oligomerization state of the complex (i.e., its quaternary structure) may be analyzed. At higher laser intensity, complexes are thermolyzed into subunits, with any residual detergent being stripped off to yield the true mass of the polypeptides. The model complexes studied are derived from the respiratory chain of the soil bacterium Paracoccus denitrificans and include complexes III (cytochrome bc(1) complex) and IV (cytochrome c oxidase). These are well characterized multi-subunit membrane proteins, with the individual hydrophobic subunits being composed of up to 12 transmembrane helices.
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Affiliation(s)
- Nina Morgner
- Institute for Physical and Theoretical Chemistry, Johann Wolfgang Goethe University, Frankfurt am Main, Germany
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Current literature in mass spectrometry. JOURNAL OF MASS SPECTROMETRY : JMS 2007; 42:127-38. [PMID: 17199253 PMCID: PMC7166443 DOI: 10.1002/jms.1070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
In order to keep subscribers up‐to‐date with the latest developments in their field, John Wiley & Sons are providing a current awareness service in each issue of the journal. The bibliography contains newly published material in the field of mass spectrometry. Each bibliography is divided into 11 sections: 1 Books, Reviews & Symposia; 2 Instrumental Techniques & Methods; 3 Gas Phase Ion Chemistry; 4 Biology/Biochemistry: Amino Acids, Peptides & Proteins; Carbohydrates; Lipids; Nucleic Acids; 5 Pharmacology/Toxicology; 6 Natural Products; 7 Analysis of Organic Compounds; 8 Analysis of Inorganics/Organometallics; 9 Surface Analysis; 10 Environmental Analysis; 11 Elemental Analysis. Within each section, articles are listed in alphabetical order with respect to author (6 Weeks journals ‐ Search completed at 4th. Oct. 2006)
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Charvat A, Abel B. How to make big molecules fly out of liquid water: applications, features and physics of laser assisted liquid phase dispersion mass spectrometry. Phys Chem Chem Phys 2007; 9:3335-60. [PMID: 17664960 DOI: 10.1039/b615114k] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Applications, features, and mechanistic details of laser assisted liquid phase dispersion mass spectrometry are highlighted and discussed. It has been used in the past to directly isolate charged molecular aggregates from the liquid phase and to determine their molecular weight employing sensitive time-of-flight mass spectrometry. The liquid matrix in this MALDI (matrix assisted laser desorption and ionization) type approach consists of a 10 microm diameter free liquid filament in vacuum (or a free droplet) which is excited with a focused infrared laser pulse tuned to match the absorption frequency of the OH-stretch vibration of bulk water near 2.8 microm. Due to these features we will refer to the approach as free liquid matrix assisted laser dispersion of ions or ionic aggregates (IR-FL-MALDI), although also LILBID ("laser induced liquid beam (bead) desorption and ionization") has been proposed early as a descriptive acronym for the technique and may be used alternatively. Low-charge-state macromolecular adducts are isolated in the gas phase from solution via a yet poorly characterized mechanism which sensitively depends upon the laser intensity and wavelength, and after the gentle liquid-to-vacuum transfer the aggregates are analyzed via time-of-flight (TOF) mass spectrometry (MS). Possible mechanisms for the isolation and charging of biomolecules directly from liquid solution are discussed in the present contribution. Recent technical advances such as minimizing the sample consumption, strategies for high throughput mass spectrometry, and coupling of liquid beam MS with HPLC will be highlighted as well. An interesting feature of IR-FL-MALDI is what we call the linear response, i.e., a surprising linearity of the gas phase mass signal on the solution concentration over many orders of magnitude for a large number of biomolecular systems as well as ions. Due to these features the approach may be regarded as a true solution probing spectroscopy, which enables elegant biokinetic studies. Several experiments in which time resolved IR-FL-MALDI-MS has recently been employed successfully are given. A particular highlight is the possibility to quantitatively detect oxidation states in solution, which clearly distinguishes the present approach from other established MS source concepts. Due to the good matrix tolerance also proteins in complex mixtures can be monitored quantitatively.
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Affiliation(s)
- Ales Charvat
- Max-Planck Institut für biophysikalische Chemie, Am Fassberg 11, 37077, Göttingen, Germany
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Steinberg MZ, Breuker K, Elber R, Gerber RB. The dynamics of water evaporation from partially solvated cytochrome c in the gas phase. Phys Chem Chem Phys 2007; 9:4690-7. [PMID: 17700870 DOI: 10.1039/b705905a] [Citation(s) in RCA: 57] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The study of evaporation of water from biological macromolecules is important for the understanding of electrospray mass spectrometry experiments. In electrospray ionization (ESI), electrically charged nanoscale droplets are formed from solutions of, for example, proteins. Then evaporation of the solvent leads to dry protein ions that can be analyzed in the mass spectrometer. In this work the dynamics of water evaporation from native cytochrome c covered by a monolayer of water is studied by molecular dynamics (MD) simulations at constant energy. A model of the initial conditions of the process is introduced. The temperature of the protein drops by about 100 K during the 400 picoseconds of the simulations. This sharp drop in temperature causes the water evaporation rate to decrease by about an order of magnitude, leaving the protein with 50% to 90% of the original water molecules, depending on the initial temperature of the simulation. The structural changes of the protein upon desolvation were considered through calculations of the radius of gyration and the root mean square (RMS) of the protein. A variation of 0.4 A in the radius of gyration, together with an RMS value of less than 3 A, indicates only minor changes in the overall shape of the protein structure. The water coordination number of the solvation shell is much smaller than that for bulk water. The mobility of water is high at the beginning of the simulations and drops as the simulation progresses and the temperature decreases. Incomplete desolvation of protein ions was also observed in recent experiments.
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Affiliation(s)
- Michal Z Steinberg
- Department of Physical Chemistry and the Fritz Haber Research Center, The Hebrew University, 91904, Jerusalem, Israel
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Charvat A, Gessler F, Niemeyer J, Bögehold A, Abel B. Rapid Quantitative Detection of Bovine Serum Albumin in Blood Serum with Seeded Liquid Beam Desorption Mass Spectrometry. ANAL LETT 2006. [DOI: 10.1080/00032710600752113] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Kondow T, Mafuné F, Kohno JY. What is a Liquid Beam? Aust J Chem 2006. [DOI: 10.1071/ch06057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Maselli OJ, Gascooke JR, Kobelt SL, Metha GF, Buntine MA. Rotational Energy Distributions of Benzene Liberated from Aqueous Liquid Microjets: A Comparison between Evaporation and Infrared Desorption. Aust J Chem 2006. [DOI: 10.1071/ch05319] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
We have measured the rotational energy distribution of benzene molecules both evaporated and desorbed by an IR laser from a liquid microjet. Analysis of the 601 vibronic band of benzene has shown that the benzene molecules evaporating from the liquid microjet surface have a rotational temperature of 157 ± 7 K. In contrast, the rotational temperature of benzene molecules desorbed from the liquid microjet by a 1.9 μm laser pulse is 82 ± 5 K. However, in both cases careful inspection of the spectral profiles shows that the experimental rotational distributions are non-Boltzmann, displaying an underpopulation of high rotational states and a relative overpopulation of the low rotational states. The non-equilibrium evaporation and desorption spectral profiles are consistent with a model that involves transfer of internal energy into translation upon liberation from the condensed phase.
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