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Number Cited by Other Article(s)
1
Bazile J, Jaffrezic F, Dehais P, Reichstadt M, Klopp C, Laloe D, Bonnet M. Molecular signatures of muscle growth and composition deciphered by the meta-analysis of age-related public transcriptomics data. Physiol Genomics 2020;52:322-332. [PMID: 32657225 DOI: 10.1152/physiolgenomics.00020.2020] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
2
Ben-Arye T, Levenberg S. Tissue Engineering for Clean Meat Production. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2019. [DOI: 10.3389/fsufs.2019.00046] [Citation(s) in RCA: 75] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
3
Moreno-Sánchez N, Rueda J, Reverter A, Carabaño MJ, Díaz C. Muscle-specific gene expression is underscored by differential stressor responses and coexpression changes. Funct Integr Genomics 2011;12:93-103. [DOI: 10.1007/s10142-011-0249-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2011] [Revised: 08/11/2011] [Accepted: 08/16/2011] [Indexed: 11/24/2022]
4
De Jager N, Hudson NJ, Reverter A, Wang YH, Nagaraj SH, Cafe LM, Greenwood PL, Barnard RT, Kongsuwan KP, Dalrymple BP. Chronic exposure to anabolic steroids induces the muscle expression of oxytocin and a more than fiftyfold increase in circulating oxytocin in cattle. Physiol Genomics 2011;43:467-78. [DOI: 10.1152/physiolgenomics.00226.2010] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
5
Roy NC, Altermann E, Park ZA, McNabb WC. A comparison of analog and Next-Generation transcriptomic tools for mammalian studies. Brief Funct Genomics 2011;10:135-50. [DOI: 10.1093/bfgp/elr005] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
6
Li X, Wu HX, Southerton SG. Seasonal reorganization of the xylem transcriptome at different tree ages reveals novel insights into wood formation in Pinus radiata. THE NEW PHYTOLOGIST 2010;187:764-76. [PMID: 20561208 DOI: 10.1111/j.1469-8137.2010.03333.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
7
Moreno-Sánchez N, Rueda J, Carabaño MJ, Reverter A, McWilliam S, González C, Díaz C. Skeletal muscle specific genes networks in cattle. Funct Integr Genomics 2010;10:609-18. [PMID: 20524025 PMCID: PMC2990504 DOI: 10.1007/s10142-010-0175-2] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2010] [Revised: 04/21/2010] [Accepted: 04/30/2010] [Indexed: 11/29/2022]
8
Díaz C, Moreno-Sánchez N, Rueda J, Reverter A, Wang YH, Carabaño MJ. Model selection in a global analysis of a microarray experiment1. J Anim Sci 2009;87:88-98. [DOI: 10.2527/jas.2007-0713] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
9
Moreno-Sánchez N, Díaz C, Carabaño MJ, Rueda J, Rivero JLL. A comprehensive characterisation of the fibre composition and properties of a limb (flexor digitorum superficialis, membri thoraci) and a trunk (psoas major) muscle in cattle. BMC Cell Biol 2008;9:67. [PMID: 19077313 PMCID: PMC2630315 DOI: 10.1186/1471-2121-9-67] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2008] [Accepted: 12/15/2008] [Indexed: 11/10/2022]  Open
10
Wang YH, Bower NI, Reverter A, Tan SH, De Jager N, Wang R, McWilliam SM, Cafe LM, Greenwood PL, Lehnert SA. Gene expression patterns during intramuscular fat development in cattle. J Anim Sci 2008;87:119-30. [PMID: 18820161 DOI: 10.2527/jas.2008-1082] [Citation(s) in RCA: 136] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
11
Byrne KA, Wang YH, Lehnert SA, Harper GS, McWilliam SM, Bruce HL, Reverter A. Gene expression profiling of muscle tissue in Brahman steers during nutritional restriction. J Anim Sci 2007;83:1-12. [PMID: 15583036 DOI: 10.2527/2005.8311] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]  Open
12
Moser RJ, Reverter A, Lehnert SA. Gene expression profiling of porcine peripheral blood leukocytes after infection with Actinobacillus pleuropneumoniae. Vet Immunol Immunopathol 2007;121:260-74. [PMID: 18054086 DOI: 10.1016/j.vetimm.2007.10.007] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2007] [Revised: 08/02/2007] [Accepted: 10/11/2007] [Indexed: 01/15/2023]
13
Bernard C, Cassar-Malek I, Le Cunff M, Dubroeucq H, Renand G, Hocquette JF. New indicators of beef sensory quality revealed by expression of specific genes. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2007;55:5229-37. [PMID: 17547415 DOI: 10.1021/jf063372l] [Citation(s) in RCA: 136] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
14
Recent advances in cattle functional genomics and their application to beef quality. Animal 2007;1:159-73. [DOI: 10.1017/s1751731107658042] [Citation(s) in RCA: 65] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
15
Barendse W, Bunch RJ, Kijas JW, Thomas MB. The effect of genetic variation of the retinoic acid receptor-related orphan receptor C gene on fatness in cattle. Genetics 2006;175:843-53. [PMID: 17151246 PMCID: PMC1800623 DOI: 10.1534/genetics.106.064535] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
16
Nutrigenomics: Feeding the genes for improved fertility. Anim Reprod Sci 2006;96:312-22. [DOI: 10.1016/j.anireprosci.2006.08.009] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
17
Lehnert SA, Byrne KA, Reverter A, Nattrass GS, Greenwood PL, Wang YH, Hudson NJ, Harper GS. Gene expression profiling of bovine skeletal muscle in response to and during recovery from chronic and severe undernutrition1. J Anim Sci 2006;84:3239-50. [PMID: 17093216 DOI: 10.2527/jas.2006-192] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
18
Reverter A, Wang YH, Byrne KA, Tan SH, Harper GS, Lehnert SA. Joint analysis of multiple cDNA microarray studies via multivariate mixed models applied to genetic improvement of beef cattle. J Anim Sci 2006;82:3430-9. [PMID: 15537761 DOI: 10.2527/2004.82123430x] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
19
Reverter A, Hudson NJ, Wang Y, Tan SH, Barris W, Byrne KA, McWilliam SM, Bottema CDK, Kister A, Greenwood PL, Harper GS, Lehnert SA, Dalrymple BP. A gene coexpression network for bovine skeletal muscle inferred from microarray data. Physiol Genomics 2006;28:76-83. [PMID: 16985009 DOI: 10.1152/physiolgenomics.00105.2006] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
20
Reverter A, Ingham A, Lehnert SA, Tan SH, Wang Y, Ratnakumar A, Dalrymple BP. Simultaneous identification of differential gene expression and connectivity in inflammation, adipogenesis and cancer. ACTA ACUST UNITED AC 2006;22:2396-404. [PMID: 16864591 DOI: 10.1093/bioinformatics/btl392] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
21
Current Research Status for Economically Important Candidate Genes and Microarray Studies in Cattle. JOURNAL OF ANIMAL SCIENCE AND TECHNOLOGY 2006. [DOI: 10.5187/jast.2006.48.2.169] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
22
Tan SH, Reverter A, Wang Y, Byrne KA, McWilliam SM, Lehnert SA. Gene expression profiling of bovine in vitro adipogenesis using a cDNA microarray. Funct Integr Genomics 2006;6:235-49. [PMID: 16470362 DOI: 10.1007/s10142-005-0016-x] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2005] [Revised: 10/04/2005] [Accepted: 10/08/2005] [Indexed: 12/16/2022]
23
Lehnert SA, Wang YH, Tan SH, Reverter A. Gene expression-based approaches to beef quality research. ACTA ACUST UNITED AC 2006. [DOI: 10.1071/ea05226] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
24
Donaldson L, Vuocolo T, Gray C, Strandberg Y, Reverter A, McWilliam S, Wang Y, Byrne K, Tellam R. Construction and validation of a Bovine Innate Immune Microarray. BMC Genomics 2005;6:135. [PMID: 16176586 PMCID: PMC1261263 DOI: 10.1186/1471-2164-6-135] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2005] [Accepted: 09/22/2005] [Indexed: 01/12/2023]  Open
25
Functional genomics in farm animals – Microarray analysis. Meat Sci 2005;71:128-37. [DOI: 10.1016/j.meatsci.2005.04.011] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
26
Wang YH, Byrne KA, Reverter A, Harper GS, Taniguchi M, McWilliam SM, Mannen H, Oyama K, Lehnert SA. Transcriptional profiling of skeletal muscle tissue from two breeds of cattle. Mamm Genome 2005;16:201-10. [PMID: 15834637 DOI: 10.1007/s00335-004-2419-8] [Citation(s) in RCA: 103] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2004] [Accepted: 11/18/2004] [Indexed: 12/16/2022]
27
Wang YH, Reverter A, Mannen H, Taniguchi M, Harper GS, Oyama K, Byrne KA, Oka A, Tsuji S, Lehnert SA. Transcriptional profiling of muscle tissue in growing Japanese Black cattle to identify genes involved with the development of intramuscular fat. ACTA ACUST UNITED AC 2005. [DOI: 10.1071/ea05058] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
28
Reverter A, Barris W, Moreno-Sánchez N, McWilliam S, Wang YH, Harper GS, Lehnert SA, Dalrymple BP. Construction of gene interaction and regulatory networks in bovine skeletal muscle from expression data. ACTA ACUST UNITED AC 2005. [DOI: 10.1071/ea05039] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
29
Norris BJ, Bower NI, Smith WJM, Cam GR, Reverter A. Gene expression profiling of ovine skin and wool follicle development using a combined ovine - bovine skin cDNA microarray. ACTA ACUST UNITED AC 2005. [DOI: 10.1071/ea05050] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
30
Burrow HM, Bindon BM. Genetics research in the Cooperative Research Centre for Cattle and Beef Quality. ACTA ACUST UNITED AC 2005. [DOI: 10.1071/ea05069] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
31
Current Awareness on Comparative and Functional Genomics. Comp Funct Genomics 2005. [PMCID: PMC2447508 DOI: 10.1002/cfg.422] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]  Open
32
Reverter A, Barris W, McWilliam S, Byrne KA, Wang YH, Tan SH, Hudson N, Dalrymple BP. Validation of alternative methods of data normalization in gene co-expression studies. Bioinformatics 2004;21:1112-20. [PMID: 15564293 DOI: 10.1093/bioinformatics/bti124] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]  Open
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