1
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Erić V, Castro JL, Li X, Dsouza L, Frehan SK, Huijser A, Holzwarth AR, Buda F, Sevink GJA, de Groot HJM, Jansen TLC. Ultrafast Anisotropy Decay Reveals Structure and Energy Transfer in Supramolecular Aggregates. J Phys Chem B 2023; 127:7487-7496. [PMID: 37594912 PMCID: PMC10476209 DOI: 10.1021/acs.jpcb.3c04719] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Revised: 07/20/2023] [Indexed: 08/20/2023]
Abstract
Chlorosomes from green bacteria perform the most efficient light capture and energy transfer, as observed among natural light-harvesting antennae. Hence, their unique functional properties inspire developments in artificial light-harvesting and molecular optoelectronics. We examine two distinct organizations of the molecular building blocks as proposed in the literature, demonstrating how these organizations alter light capture and energy transfer, which can serve as a mechanism that the bacteria utilize to adapt to changes in light conditions. Spectral simulations of polarization-resolved two-dimensional electronic spectra unravel how changes in the helicity of chlorosomal aggregates alter energy transfer. We show that ultrafast anisotropy decay presents a spectral signature that reveals contrasting energy pathways in different chlorosomes.
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Affiliation(s)
- Vesna Erić
- Zernike
Institute for Advanced Materials, University
of Groningen, 9747 AG Groningen, The Netherlands
| | - Jorge Luis Castro
- Zernike
Institute for Advanced Materials, University
of Groningen, 9747 AG Groningen, The Netherlands
| | - Xinmeng Li
- Department
of Chemistry and Hylleraas Centre for Quantum Molecular Sciences, University of Oslo, Sem Sælands vei 26, 0315 Oslo, Norway
| | - Lolita Dsouza
- Leiden
Institute of Chemistry, Leiden University, Einsteinweg 55, 2300 RA Leiden, The Netherlands
| | - Sean K. Frehan
- MESA+
Institute for Nanotechnology, University
of Twente, Drienerlolaan 5, 7522 NB Enschede, The Netherlands
| | - Annemarie Huijser
- MESA+
Institute for Nanotechnology, University
of Twente, Drienerlolaan 5, 7522 NB Enschede, The Netherlands
| | - Alfred R. Holzwarth
- Department
of Biophysical Chemistry, Max Planck Institute
for Chemical Energy Conversion, Stiftstraße 34-36, 45470 Mülheim, Germany
| | - Francesco Buda
- Leiden
Institute of Chemistry, Leiden University, Einsteinweg 55, 2300 RA Leiden, The Netherlands
| | - G. J. Agur Sevink
- Leiden
Institute of Chemistry, Leiden University, Einsteinweg 55, 2300 RA Leiden, The Netherlands
| | - Huub J. M. de Groot
- Leiden
Institute of Chemistry, Leiden University, Einsteinweg 55, 2300 RA Leiden, The Netherlands
| | - Thomas L. C. Jansen
- Zernike
Institute for Advanced Materials, University
of Groningen, 9747 AG Groningen, The Netherlands
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2
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Leng X, Yan Y, Zhu R, Zou J, Zhang W, Shi Q. Revealing Intermolecular Electronic and Vibronic Coherence with Polarization-Dependent Two-Dimensional Beating Maps. J Phys Chem Lett 2023; 14:838-845. [PMID: 36656105 DOI: 10.1021/acs.jpclett.2c03413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
Two-dimensional electronic spectroscopy (2DES) has been widely employed as an efficient tool to reveal the impact of intermolecular electronic and/or vibronic quantum coherence on excitation energy transfer in light-harvesting complexes. However, intramolecular vibrational coherence would also contribute to oscillating signals in 2D spectra, along with the intermolecular coherence signals that are directly related to energy transfer. In this work, the possibility of screening the vibrational coherence signals is explored through polarization-dependent 2DES. The all-parallel (AP) and double-crossed (DC) polarization-dependent two-dimensional rephasing spectra (2DRS) are simulated for a minimalist heterodimer model with vibrational coupling. By combining the DC-2DRS and the 2D beating maps, we demonstrate that the population and vibrational coherence signals can be largely suppressed, resulting in highlighted intermolecular electronic and vibronic coherence signals. Moreover, the AP- and DC-2DBMs show rather different patterns at the vibrational frequency, indicating a possible way to identify pure vibrational coherence.
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Affiliation(s)
- Xuan Leng
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, China
| | - Yaming Yan
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, China
| | - Ruidan Zhu
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
| | - Jiading Zou
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Wenzhao Zhang
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, China
| | - Qiang Shi
- Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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3
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Zhu R, Ruan M, Li H, Leng X, Zou J, Wang J, Chen H, Wang Z, Weng Y. Vibrational and vibronic coherences in the energy transfer process of light-harvesting complex II revealed by two-dimensional electronic spectroscopy. J Chem Phys 2022; 156:125101. [DOI: 10.1063/5.0082280] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The presence of quantum coherence in light-harvesting complex II (LHCII) as a mechanism to understand the efficiency of the light-harvesting function in natural photosynthetic systems is still debated due to its structural complexity and weak-amplitude coherent oscillations. Here, we revisit the coherent dynamics and clarify different types of coherences in the energy transfer processes of LHCII using a joint method of the high-S/N transient grating and two-dimensional electronic spectroscopy. We find that the electronic coherence decays completely within 50 fs at room temperature. The vibrational coherences of chlorophyll a dominate over oscillations within 1 ps, whereas a low-frequency mode of 340 cm−1 with a vibronic mixing character may participate in vibrationally assisted energy transfer between chlorophylls a. Our results may suggest that vibronic mixing is relevant for rapid energy transfer processes among chlorophylls in LHCII.
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Affiliation(s)
- Ruidan Zhu
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Meixia Ruan
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hao Li
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xuan Leng
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jiading Zou
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jiayu Wang
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hailong Chen
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- Songshan Lake Materials Laboratory, Dongguan, Guangdong 523808, China
| | - Zhuan Wang
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
| | - Yuxiang Weng
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- Songshan Lake Materials Laboratory, Dongguan, Guangdong 523808, China
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4
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Dostál J. Nonresonant coherent two-dimensional spectroscopy. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2022; 267:120441. [PMID: 34678717 DOI: 10.1016/j.saa.2021.120441] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Revised: 09/03/2021] [Accepted: 09/22/2021] [Indexed: 06/13/2023]
Abstract
Coherent electronic two-dimensional spectroscopy is nowadays a matured experimental technique that monitors the time evolution of the studied sample after its resonant optical excitation. However, the experimental experience shows that even nonresonant interactions can provide detectable spectral contributions. These are often present as a weak parasitic signals originating in the solvent and/or cuvette walls underlying the resonant spectrum of the actual sample and as such they are usually discarded from the analysis. In this work, we adapt the formalism of double-sided Feynman diagrams for the needs of coherent two-dimensional spectroscopy in the nonresonant regime. We analytically calculate the third-order polarization of a two-level and several variants of three-level systems. As a result, we demonstrate the typical appearance of the optical Kerr-effect, cross-phase modulation, excited-state coherence, two-photon absorption and stimulated Raman scattering in the 2D spectrum. This provides a framework for studying these effects by means of coherent two-dimensional spectroscopy.
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Affiliation(s)
- Jakub Dostál
- Department of Chemical Physics and Optics, Faculty of Mathematics and Physics, Charles University, Ke Karlovu 3, Prague 121 16, Czech Republic; ELI Beamlines, Institute of Physics, Czech Academy of Sciences, Za Radnicí 835, Dolní Břežany 252 41, Czech Republic.
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5
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A polarization scheme that resolves cross-peaks with transient absorption and eliminates diagonal peaks in 2D spectroscopy. Proc Natl Acad Sci U S A 2022; 119:2117398119. [PMID: 35115405 PMCID: PMC8833161 DOI: 10.1073/pnas.2117398119] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/16/2021] [Indexed: 11/18/2022] Open
Abstract
Two-dimensional (2D) optical spectroscopy contains cross-peaks that are helpful features for determining molecular structure and monitoring energy transfer, but they can be difficult to resolve from the much more intense diagonal peaks. Transient absorption (TA) spectra contain transitions similar to cross-peaks in 2D spectroscopy, but in most cases they are obscured by the bleach and stimulated emission peaks. We report a polarization scheme, <0°,0°,+θ2(t2),-θ2(t2)>, that can be easily implemented in the pump-probe beam geometry, used most frequently in 2D and TA spectroscopy. This scheme removes the diagonal peaks in 2D spectroscopies and the intense bleach/stimulated emission peaks in TA spectroscopies, thereby resolving the cross-peak features. At zero pump-probe delay, θ2 = 60° destructively interferes two Feynman paths, eliminating all signals generated by field interactions with four parallel transition dipoles, and the intense diagonal and bleach/stimulated emission peaks. At later delay times, θ2(t2) is adjusted to compensate for anisotropy caused by rotational diffusion. When implemented with TA spectroscopy or microscopy, the pump-probe spectrum is dominated by the cross-peak features. The local oscillator is also attenuated, which enhances the signal two times. This overlooked polarization scheme reduces spectral congestion by eliminating diagonal peaks in 2D spectra and enables TA spectroscopy to measure similar information given by cross-peaks in 2D spectroscopy.
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6
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Kim J, Nguyen-Phan TC, Gardiner AT, Yoon TH, Cogdell RJ, Cho M, Scholes GD. Vibrational Modes Promoting Exciton Relaxation in the B850 Band of LH2. J Phys Chem Lett 2022; 13:1099-1106. [PMID: 35080414 DOI: 10.1021/acs.jpclett.1c03868] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Exciton relaxation dynamics in multichromophore systems are often modeled using Redfield theory, where bath fluctuations mediate the relaxation among the exciton eigenstates. Identifying the vibrational or phonon modes that are implicated in exciton relaxation allows more detailed understanding of exciton dynamics. Here we focus on a well-studied light-harvesting II complex (LH2) isolated from the photosynthetic purple bacterium Rhodoblastus acidophilus strain 10050. Using two synchronized mode-locked lasers, we carried out a polarization-dependent two-dimensional electronic spectroscopy (2DES) study of an ultrafast exciton relaxation in the B850 band of LH2. 2DES data with different polarization configurations enable us to investigate the exciton relaxation between the k = ±1 exciton states. Then, we identify vibrational modes coupled to the exciton relaxation by analyzing the coherent wavepackets in the 2DES signals. Focusing on the coherent vibrational wavepackets, the data suggest that certain symmetry-breaking modes of monomeric units play a key role in exciton relaxation.
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Affiliation(s)
- JunWoo Kim
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Tu C Nguyen-Phan
- Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8TA, United Kingdom
| | - Alastair T Gardiner
- Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8TA, United Kingdom
| | - Tai Hyun Yoon
- Center for Molecular Spectroscopy and Dynamics, Institute for Basic Science (IBS), Seoul 02841, Republic of Korea
- Department of Physics, Korea University, Seoul 02841, Republic of Korea
| | - Richard J Cogdell
- Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8TA, United Kingdom
| | - Minhaeng Cho
- Center for Molecular Spectroscopy and Dynamics, Institute for Basic Science (IBS), Seoul 02841, Republic of Korea
- Department of Chemistry, Korea University, Seoul 02841, Republic of Korea
| | - Gregory D Scholes
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
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7
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Biswas S, Kim J, Zhang X, Scholes GD. Coherent Two-Dimensional and Broadband Electronic Spectroscopies. Chem Rev 2022; 122:4257-4321. [PMID: 35037757 DOI: 10.1021/acs.chemrev.1c00623] [Citation(s) in RCA: 38] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Over the past few decades, coherent broadband spectroscopy has been widely used to improve our understanding of ultrafast processes (e.g., photoinduced electron transfer, proton transfer, and proton-coupled electron transfer reactions) at femtosecond resolution. The advances in femtosecond laser technology along with the development of nonlinear multidimensional spectroscopy enabled further insights into ultrafast energy transfer and carrier relaxation processes in complex biological and material systems. New discoveries and interpretations have led to improved design principles for optimizing the photophysical properties of various artificial systems. In this review, we first provide a detailed theoretical framework of both coherent broadband and two-dimensional electronic spectroscopy (2DES). We then discuss a selection of experimental approaches and considerations of 2DES along with best practices for data processing and analysis. Finally, we review several examples where coherent broadband and 2DES were employed to reveal mechanisms of photoinitiated ultrafast processes in molecular, biological, and material systems. We end the review with a brief perspective on the future of the experimental techniques themselves and their potential to answer an even greater range of scientific questions.
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Affiliation(s)
- Somnath Biswas
- Department of Chemistry, Princeton University, Princeton, New Jersey 08 544, United States
| | - JunWoo Kim
- Department of Chemistry, Princeton University, Princeton, New Jersey 08 544, United States
| | - Xinzi Zhang
- Department of Chemistry, Princeton University, Princeton, New Jersey 08 544, United States
| | - Gregory D Scholes
- Department of Chemistry, Princeton University, Princeton, New Jersey 08 544, United States
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8
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Mannouch JR, Richardson JO. A partially linearized spin-mapping approach for simulating nonlinear optical spectra. J Chem Phys 2022; 156:024108. [PMID: 35032975 DOI: 10.1063/5.0077744] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We present a partially linearized method based on spin-mapping for computing both linear and nonlinear optical spectra. As observables are obtained from ensembles of classical trajectories, the approach can be applied to the large condensed-phase systems that undergo photosynthetic light-harvesting processes. In particular, the recently derived spin partially linearized density matrix method has been shown to exhibit superior accuracy in computing population dynamics compared to other related classical-trajectory methods. Such a method should also be ideally suited to describing the quantum coherences generated by interaction with light. We demonstrate that this is, indeed, the case by calculating the nonlinear optical response functions relevant for the pump-probe and 2D photon-echo spectra for a Frenkel biexciton model and the Fenna-Matthews-Olsen light-harvesting complex. One especially desirable feature of our approach is that the full spectrum can be decomposed into its constituent components associated with the various Liouville-space pathways, offering a greater insight beyond what can be directly obtained from experiments.
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9
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Le DV, de la Perrelle JM, Do TN, Leng X, Tapping PC, Scholes GD, Kee TW, Tan HS. Characterization of the ultrafast spectral diffusion and vibronic coherence of TIPS-pentacene using 2D electronic spectroscopy. J Chem Phys 2021; 155:014302. [PMID: 34241376 DOI: 10.1063/5.0055528] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
TIPS-pentacene is a small-molecule organic semiconductor that is widely used in optoelectronic devices. It has been studied intensely owing to its ability to undergo singlet fission. In this study, we aim to develop further understanding of the coupling between the electronic and nuclear degrees of freedom of TIPS-pentacene (TIPS-Pn). We measured and analyzed the 2D electronic spectra of TIPS-Pn in solutions. Using center line slope (CLS) analysis, we characterized the frequency-fluctuation correlation function of the 0-0 vibronic transition. Strong oscillations in the CLS values were observed for up to 5 ps with a frequency of 264 cm-1, which are attributable to a large vibronic coupling with the TIPS-Pn ring-breathing vibrational mode. In addition, detailed analysis of the CLS values allowed us to retrieve two spectral diffusion lifetimes, which are attributed to the inertial and diffusive dynamics of solvent molecules. Amplitude beating analysis also uncovered couplings with another vibrational mode at 1173 cm-1. The experimental results can be described using the displaced harmonic oscillator model. By comparing the CLS values of the simulated data with the experimental CLS values, we estimated a Huang-Rhys factor of 0.1 for the ring-breathing vibrational mode. The results demonstrated how CLS analysis can be a useful method for characterizing the strength of vibronic coupling.
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Affiliation(s)
- Duc Viet Le
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371
| | | | - Thanh Nhut Do
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371
| | - Xuan Leng
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371
| | - Patrick C Tapping
- Department of Chemistry, University of Adelaide, Adelaide SA 5005, Australia
| | - Gregory D Scholes
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| | - Tak W Kee
- Department of Chemistry, University of Adelaide, Adelaide SA 5005, Australia
| | - Howe-Siang Tan
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371
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10
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Weakly RB, Gaynor JD, Khalil M. Multimode two-dimensional vibronic spectroscopy. II. Simulating and extracting vibronic coupling parameters from polarization-selective spectra. J Chem Phys 2021; 154:184202. [PMID: 34241007 DOI: 10.1063/5.0047727] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Abstract
Experimental demonstrations of polarization-selection two-dimensional Vibrational-Electronic (2D VE) and 2D Electronic-Vibrational (2D EV) spectroscopies aim to map the magnitudes and spatial orientations of coupled electronic and vibrational coordinates in complex systems. The realization of that goal depends on our ability to connect spectroscopic observables with molecular structural parameters. In this paper, we use a model Hamiltonian consisting of two anharmonically coupled vibrational modes in electronic ground and excited states with linear and bilinear vibronic coupling terms to simulate polarization-selective 2D EV and 2D VE spectra. We discuss the relationships between the linear vibronic coupling and two-dimensional Huang-Rhys parameters and between the bilinear vibronic coupling term and Duschinsky mixing. We develop a description of the vibronic transition dipoles and explore how the Hamiltonian parameters and non-Condon effects impact their amplitudes and orientations. Using simulated polarization-selective 2D EV and 2D VE spectra, we show how 2D peak positions, amplitudes, and anisotropy can be used to measure parameters of the vibronic Hamiltonian and non-Condon effects. This paper, along with the first in the series, provides the reader with a detailed description of reading, simulating, and analyzing multimode, polarization-selective 2D EV and 2D VE spectra with an emphasis on extracting vibronic coupling parameters from complex spectra.
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Affiliation(s)
- Robert B Weakly
- Department of Chemistry, University of Washington, P.O. Box 351700, Seattle, Washington 98195, USA
| | - James D Gaynor
- Department of Chemistry, University of Washington, P.O. Box 351700, Seattle, Washington 98195, USA
| | - Munira Khalil
- Department of Chemistry, University of Washington, P.O. Box 351700, Seattle, Washington 98195, USA
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11
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Gaynor JD, Weakly RB, Khalil M. Multimode two-dimensional vibronic spectroscopy. I. Orientational response and polarization-selectivity. J Chem Phys 2021; 154:184201. [PMID: 34241026 DOI: 10.1063/5.0047724] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Two-dimensional Electronic-Vibrational (2D EV) spectroscopy and two-dimensional Vibrational-Electronic (2D VE) spectroscopy are among the newest additions to the coherent multidimensional spectroscopy toolbox, and they are directly sensitive to vibronic couplings. In this first of two papers, the complete orientational response functions are developed for a model system consisting of two coupled anharmonic oscillators and two electronic states in order to simulate polarization-selective 2D EV and 2D VE spectra with arbitrary combinations of linearly polarized electric fields. Here, we propose analytical methods to isolate desired signals within complicated spectra and to extract the relative orientation between vibrational and vibronic dipole moments of the model system using combinations of polarization-selective 2D EV and 2D VE spectral features. Time-dependent peak amplitudes of coherence peaks are also discussed as means for isolating desired signals within the time-domain. This paper serves as a field guide for using polarization-selective 2D EV and 2D VE spectroscopies to map coupled vibronic coordinates on the molecular frame.
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Affiliation(s)
- James D Gaynor
- Department of Chemistry, University of Washington, P.O. Box 351700, Seattle, Washington 98195, USA
| | - Robert B Weakly
- Department of Chemistry, University of Washington, P.O. Box 351700, Seattle, Washington 98195, USA
| | - Munira Khalil
- Department of Chemistry, University of Washington, P.O. Box 351700, Seattle, Washington 98195, USA
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12
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The role of mixed vibronic Q y-Q x states in green light absorption of light-harvesting complex II. Nat Commun 2020; 11:6011. [PMID: 33243997 PMCID: PMC7691517 DOI: 10.1038/s41467-020-19800-y] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Accepted: 10/27/2020] [Indexed: 11/24/2022] Open
Abstract
The importance of green light for driving natural photosynthesis has long been underappreciated, however, under the presence of strong illumination, green light actually drives photosynthesis more efficiently than red light. This green light is absorbed by mixed vibronic Qy-Qx states, arising from chlorophyll (Chl)-Chl interactions, although almost nothing is known about these states. Here, we employ polarization-dependent two-dimensional electronic-vibrational spectroscopy to study the origin and dynamics of the mixed vibronic Qy-Qx states of light-harvesting complex II. We show the states in this region dominantly arise from Chl b and demonstrate how it is possible to distinguish between the degree of vibronic Qy versus Qx character. We find that the dynamics for states of predominately Chl b Qy versus Chl b Qx character are markedly different, as excitation persists for significantly longer in the Qx states and there is an oscillatory component to the Qx dynamics, which is discussed. Our findings demonstrate the central role of electronic-nuclear mixing in efficient light-harvesting and the different functionalities of Chl a and Chl b. The green component of the solar spectrum can efficiently drive natural photosynthesis, but the process has been little investigated due to the complexity of the excited states involved. Here the authors utilize polarization-dependent two-dimensional electronic-vibrational spectroscopy to define the origin and dynamics of these states in light-harvesting complex II.
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13
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Lloyd LT, Wood RE, Allodi MA, Sohoni S, Higgins JS, Otto JP, Engel GS. Leveraging scatter in two-dimensional spectroscopy: passive phase drift correction enables a global phasing protocol. OPTICS EXPRESS 2020; 28:32869-32881. [PMID: 33114962 DOI: 10.1364/oe.404601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2020] [Accepted: 10/06/2020] [Indexed: 06/11/2023]
Abstract
Phase stability between pulse pairs defining Fourier-transform time delays can limit resolution and complicates development and adoption of multidimensional coherent spectroscopies. We demonstrate a data processing procedure to correct the long-term phase drift of the nonlinear signal during two-dimensional (2D) experiments based on the relative phase between scattered excitation pulses and a global phasing procedure to generate fully absorptive 2D electronic spectra of wafer-scale monolayer MoS2. Our correction results in a ∼30-fold increase in effective long-term signal phase stability, from ∼λ/2 to ∼λ/70 with negligible extra experimental time and no additional optical components. This scatter-based drift correction should be applicable to other interferometric techniques as well, significantly lowering the practical experimental requirements for this class of measurements.
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14
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Sardjan AS, Westerman FP, Ogilvie JP, Jansen TLC. Observation of Ultrafast Coherence Transfer and Degenerate States with Polarization-Controlled Two-Dimensional Electronic Spectroscopy. J Phys Chem B 2020; 124:9420-9427. [PMID: 32990439 PMCID: PMC7586392 DOI: 10.1021/acs.jpcb.0c08126] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
![]()
Optical
spectroscopy is a powerful tool to interrogate quantum
states of matter. We present simulation results for the cross-polarized
two-dimensional electronic spectra of the light-harvesting system
LH2 of purple bacteria. We identify a spectral feature on the diagonal,
which we assign to ultrafast coherence transfer between degenerate
states. The implication for the interpretation of previous experiments
on different systems and the potential use of this feature are discussed.
In particular, we foresee that this kind of feature will be useful
for identifying mixed degenerate states and for identifying the origin
of symmetry breaking disorder in systems like LH2. Furthermore, this
may help identify both vibrational and electronic states in biological
systems such as proteins and solid-state materials such as hybrid
perovskites.
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Affiliation(s)
- Andy S Sardjan
- Zernike Institute for Advanced Materials, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Floris P Westerman
- Zernike Institute for Advanced Materials, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Jennifer P Ogilvie
- Department of Physics, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Thomas L C Jansen
- Zernike Institute for Advanced Materials, University of Groningen, 9747 AG Groningen, The Netherlands
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15
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Thomaz JE, Lindquist KP, Karunadasa HI, Fayer MD. Single Ensemble Non-exponential Photoluminescent Population Decays from a Broadband White-Light-Emitting Perovskite. J Am Chem Soc 2020; 142:16622-16631. [PMID: 32909430 DOI: 10.1021/jacs.0c05636] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The mechanism of white-light emission from layered Pb-X (X = Cl or Br) perovskites following UV excitation has generated considerable interest. Prior time-dependent studies indicated that the broadband photoluminescence (PL) from (110) perovskites arises from a distribution of self-trapped excitonic sites emitting in different regions of the visible spectrum with different decay dynamics. Here, using time-correlated single photon counting to study single crystals, we show that the white-light emission decay from the (110) perovskite (EDBE)PbBr4 (EDBE = 2,2'-(ethylenedioxy)bis(ethylammonium)) behaves as a single ensemble. Following the rapid decay (0.6 ns) of a small spectral side band, the broad emission line shape is constant to 100 ns. We propose that rapid local structural fluctuations cause the self-trapped excitons (STEs) to experience a wide range of energies, resulting in the very broad PL. The STEs sample fluctuating local environments on time scales fast compared to the PL, which averages the PL decay at all emission wavelengths, yielding single ensemble PL dynamics. Although emission occurs from a very wide, inhomogeneously broadened spectral line with time-averaged single ensemble luminescence dynamics, the decay is tri-exponential. Two heuristic models for the tri-exponential decay involving defects are discussed. Spin-coated films show faster non-exponential decays with the slowest component of the crystal PL absent. Like the crystals, the film PL decays as a single ensemble. These results demonstrate that the broadband emission decay of (EDBE)PbBr4 arises from a time-averaged single ensemble and not from a set of excited states emitting with distinct luminescence decays at different wavelengths.
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Affiliation(s)
- Joseph E Thomaz
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Kurt P Lindquist
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Hemamala I Karunadasa
- Department of Chemistry, Stanford University, Stanford, California 94305, United States.,Stanford Institute for Materials and Energy Sciences, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - Michael D Fayer
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
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16
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Petti MK, Ostrander JS, Birdsall ER, Kunz MB, Armstrong ZT, Alperstein AM, Zanni MT. A Proposed Method to Obtain Surface Specificity with Pump-Probe and 2D Spectroscopies. J Phys Chem A 2020; 124:3471-3483. [PMID: 32255629 PMCID: PMC7993518 DOI: 10.1021/acs.jpca.9b11791] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Surfaces and interfaces are ubiquitous in nature. From cell membranes, to photovoltaic thin films, surfaces have important function in both biological and materials systems. Spectroscopic techniques have been developed to probe systems like these, such as sum frequency generation (SFG) spectroscopies. The advantage of SFG spectroscopy, a second-order spectroscopy, is that it can distinguish between signals produced from molecules in the bulk versus on the surface. We propose a polarization scheme for third-order spectroscopy experiments, such as pump-probe and 2D spectroscopy, to select for surface signals and not bulk signals. This proposed polarization condition uses one pulse perpendicular compared to the other three to isolate cross-peaks arising from molecules with polar and uniaxial (i.e., biaxial) order at a surface, while removing the signal from bulk isotropic molecules. In this work, we focus on two of these cases: XXXY and YYYX, which differ by the sign of the cross-peak they create. We compare this technique to SFG spectroscopy and vibrational circular dichroism to provide insight to the behavior of the cross-peak signal. We propose that these singularly cross-polarized schemes provide odd-ordered spectroscopies the surface-specificity typically associated with even-ordered techniques.
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Affiliation(s)
- Megan K Petti
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
| | - Joshua S Ostrander
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
| | - Erin R Birdsall
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
| | - Miriam Bohlmann Kunz
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
| | - Zachary T Armstrong
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
| | - Ariel M Alperstein
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
| | - Martin T Zanni
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
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17
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Song Y, Schubert A, Maret E, Burdick RK, Dunietz BD, Geva E, Ogilvie JP. Vibronic structure of photosynthetic pigments probed by polarized two-dimensional electronic spectroscopy and ab initio calculations. Chem Sci 2019; 10:8143-8153. [PMID: 31857881 PMCID: PMC6836992 DOI: 10.1039/c9sc02329a] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 07/02/2019] [Indexed: 12/29/2022] Open
Abstract
Bacteriochlorophyll a (Bchl a) and chlorophyll a (Chl a) play important roles as light absorbers in photosynthetic antennae and participate in the initial charge-separation steps in photosynthetic reaction centers. Despite decades of study, questions remain about the interplay of electronic and vibrational states within the Q-band and its effect on the photoexcited dynamics. Here we report results of polarized two-dimensional electronic spectroscopic measurements, performed on penta-coordinated Bchl a and Chl a and their interpretation based on state-of-the-art time-dependent density functional theory calculations and vibrational mode analysis for spectral shapes. We find that the Q-band of Bchl a is comprised of two independent bands, that are assigned following the Gouterman model to Q x and Q y states with orthogonal transition dipole moments. However, we measure the angle to be ∼75°, a finding that is confirmed by ab initio calculations. The internal conversion rate constant from Q x to Q y is found to be 11 ps-1. Unlike Bchl a, the Q-band of Chl a contains three distinct peaks with different polarizations. Ab initio calculations trace these features back to a spectral overlap between two electronic transitions and their vibrational replicas. The smaller energy gap and the mixing of vibronic states result in faster internal conversion rate constants of 38-50 ps-1. We analyze the spectra of penta-coordinated Bchl a and Chl a to highlight the interplay between low-lying vibronic states and their relationship to photoinduced relaxation. Our findings shed new light on the photoexcited dynamics in photosynthetic systems where these chromophores are primary pigments.
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Affiliation(s)
- Yin Song
- Department of Physics , University of Michigan , 450 Church St , Ann Arbor , MI 48109 , USA .
| | - Alexander Schubert
- Department of Chemistry , University of Michigan , 930 N University Ave , Ann Arbor , MI 48109 , USA
- Department of Chemistry and Biochemistry , Kent State University , 1175 Risman Drive , Kent , OH 44242 , USA
| | - Elizabeth Maret
- Applied Physics Program , University of Michigan , 450 Church St , Ann Arbor , MI 48109 , USA
| | - Ryan K Burdick
- Department of Chemistry , University of Michigan , 930 N University Ave , Ann Arbor , MI 48109 , USA
| | - Barry D Dunietz
- Department of Chemistry and Biochemistry , Kent State University , 1175 Risman Drive , Kent , OH 44242 , USA
| | - Eitan Geva
- Department of Chemistry , University of Michigan , 930 N University Ave , Ann Arbor , MI 48109 , USA
| | - Jennifer P Ogilvie
- Department of Physics , University of Michigan , 450 Church St , Ann Arbor , MI 48109 , USA .
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18
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Insights into the mechanisms and dynamics of energy transfer in plant light-harvesting complexes from two-dimensional electronic spectroscopy. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2019; 1861:148050. [PMID: 31326408 DOI: 10.1016/j.bbabio.2019.07.005] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2019] [Revised: 07/01/2019] [Accepted: 07/15/2019] [Indexed: 12/25/2022]
Abstract
During the past two decades, two-dimensional electronic spectroscopy (2DES) and related techniques have emerged as a potent experimental toolset to study the ultrafast elementary steps of photosynthesis. Apart from the highly engaging albeit controversial analysis of the role of quantum coherences in the photosynthetic processes, 2DES has been applied to resolve the dynamics and pathways of energy and electron transport in various light-harvesting antenna systems and reaction centres, providing unsurpassed level of detail. In this paper we discuss the main technical approaches and their applicability for solving specific problems in photosynthesis. We then recount applications of 2DES to study the exciton dynamics in plant and photosynthetic light-harvesting complexes, especially light-harvesting complex II (LHCII) and the fucoxanthin-chlorophyll proteins of diatoms, with emphasis on the types of unique information about such systems that 2DES is capable to deliver. This article is part of a Special Issue entitled Light harvesting, edited by Dr. Roberta Croce.
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19
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Abstract
After presenting the basic theoretical models of excitation energy transfer and charge transfer, I describe some of the novel experimental methods used to probe them. Finally, I discuss recent results concerning ultrafast energy and charge transfer in biological systems, in chemical systems and in photovoltaics based on sensitized transition metal oxides.
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Affiliation(s)
- Majed Chergui
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC, Lausanne Centre for Ultrafast Science (LACUS), FSB, Station 6, CH-1015 Lausanne, Switzerland.
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20
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Wang L, Allodi MA, Engel GS. Quantum coherences reveal excited-state dynamics in biophysical systems. Nat Rev Chem 2019. [DOI: 10.1038/s41570-019-0109-z] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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21
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Massey SC, Ting PC, Yeh SH, Dahlberg PD, Sohail SH, Allodi MA, Martin EC, Kais S, Hunter CN, Engel GS. Orientational Dynamics of Transition Dipoles and Exciton Relaxation in LH2 from Ultrafast Two-Dimensional Anisotropy. J Phys Chem Lett 2019; 10:270-277. [PMID: 30599133 DOI: 10.1021/acs.jpclett.8b03223] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Light-harvesting complexes in photosynthetic organisms display fast and efficient energy transfer dynamics, which depend critically on the electronic structure of the coupled chromophores within the complexes and their interactions with their environment. We present ultrafast anisotropy dynamics, resolved in both time and frequency, of the transmembrane light-harvesting complex LH2 from Rhodobacter sphaeroides in its native membrane environment using polarization-controlled two-dimensional electronic spectroscopy. Time-dependent anisotropy obtained from both experiment and modified Redfield simulation reveals an orientational preference for excited state absorption and an ultrafast equilibration within the B850 band in LH2. This ultrafast equilibration is favorable for subsequent energy transfer toward the reaction center. Our results also show a dynamic difference in excited state absorption anisotropy between the directly excited B850 population and the population that is initially excited at 800 nm, suggesting absorption from B850 states to higher-lying excited states following energy transfer from B850*. These results give insight into the ultrafast dynamics of bacterial light harvesting and the excited state energy landscape of LH2 in the native membrane environment.
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Affiliation(s)
- Sara C Massey
- Department of Chemistry, Institute for Biophysical Dynamics, and the James Franck Institute , The University of Chicago , Chicago , Illinois 60637 , United States
| | - Po-Chieh Ting
- Department of Chemistry, Institute for Biophysical Dynamics, and the James Franck Institute , The University of Chicago , Chicago , Illinois 60637 , United States
| | - Shu-Hao Yeh
- Department of Chemistry, Institute for Biophysical Dynamics, and the James Franck Institute , The University of Chicago , Chicago , Illinois 60637 , United States
- Qatar Environment and Energy Research Institute , Hamad Bin Khalifa University , Qatar Foundation, Doha , Qatar
| | - Peter D Dahlberg
- Graduate Program in the Biophysical Sciences, Institute for Biophysical Dynamics, and the James Franck Institute , The University of Chicago , Chicago , Illinois 60637 , United States
| | - Sara H Sohail
- Department of Chemistry, Institute for Biophysical Dynamics, and the James Franck Institute , The University of Chicago , Chicago , Illinois 60637 , United States
| | - Marco A Allodi
- Department of Chemistry, Institute for Biophysical Dynamics, and the James Franck Institute , The University of Chicago , Chicago , Illinois 60637 , United States
| | - Elizabeth C Martin
- Department of Molecular Biology and Biotechnology , University of Sheffield , Firth Court, Western Bank, Sheffield S10 2TN , United Kingdom
| | - Sabre Kais
- Department of Chemistry , Purdue University , West Lafayette , Indiana 47907 , United States
| | - C Neil Hunter
- Department of Molecular Biology and Biotechnology , University of Sheffield , Firth Court, Western Bank, Sheffield S10 2TN , United Kingdom
| | - Gregory S Engel
- Department of Chemistry, Institute for Biophysical Dynamics, and the James Franck Institute , The University of Chicago , Chicago , Illinois 60637 , United States
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22
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Konar A, Sechrist R, Song Y, Policht VR, Laible PD, Bocian DF, Holten D, Kirmaier C, Ogilvie JP. Electronic Interactions in the Bacterial Reaction Center Revealed by Two-Color 2D Electronic Spectroscopy. J Phys Chem Lett 2018; 9:5219-5225. [PMID: 30136848 DOI: 10.1021/acs.jpclett.8b02394] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
The bacterial reaction center (BRC) serves as an important model system for understanding the charge separation processes in photosynthesis. Knowledge of the electronic structure of the BRC is critical for understanding its charge separation mechanism. While it is well-accepted that the "special pair" pigments are strongly coupled, the degree of coupling among other BRC pigments has been thought to be relatively weak. Here we study the W(M250)V mutant BRC by two-color two-dimensional electronic spectroscopy to correlate changes in the Q x region with excitation of the Q y transitions. The resulting Q y-Q x cross-peaks provide a sensitive measure of the electronic interactions throughout the BRC pigment network and complement one-color 2D studies in which such interactions are often obscured by energy transfer and excited-state absorption signals. Our observations should motivate the refinement of electronic structure models of the BRC to facilitate improved understanding of the charge separation mechanism.
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Affiliation(s)
- Arkaprabha Konar
- Department of Physics , University of Michigan , Ann Arbor , Michigan 49109-1040 , United States
| | - Riley Sechrist
- Department of Physics , University of Michigan , Ann Arbor , Michigan 49109-1040 , United States
| | - Yin Song
- Department of Physics , University of Michigan , Ann Arbor , Michigan 49109-1040 , United States
| | - Veronica R Policht
- Department of Physics , University of Michigan , Ann Arbor , Michigan 49109-1040 , United States
| | - Philip D Laible
- Biosciences Division , Argonne National Laboratory , Argonne , Illinois 60439 , United States
| | - David F Bocian
- Department of Chemistry , University of California , Riverside , California 92521 , United States
| | - Dewey Holten
- Department of Chemistry , Washington University , St. Louis , Missouri 63130 , United States
| | - Christine Kirmaier
- Department of Chemistry , Washington University , St. Louis , Missouri 63130 , United States
| | - Jennifer P Ogilvie
- Department of Physics , University of Michigan , Ann Arbor , Michigan 49109-1040 , United States
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23
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Ke Y, Zhao Y. Calculations of coherent two-dimensional electronic spectra using forward and backward stochastic wavefunctions. J Chem Phys 2018; 149:014104. [DOI: 10.1063/1.5037684] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Affiliation(s)
- Yaling Ke
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, and Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, People’s Republic of China
| | - Yi Zhao
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, and Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, People’s Republic of China
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24
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Rather SR, Bezdek MJ, Koch M, Chirik PJ, Scholes GD. Ultrafast Photophysics of a Dinitrogen-Bridged Molybdenum Complex. J Am Chem Soc 2018; 140:6298-6307. [PMID: 29719149 DOI: 10.1021/jacs.8b00890] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Among the many metal-dinitrogen complexes synthesized, the end-on bridging (μ2, η1, η1-N2) coordination mode is notoriously unreactive for nitrogen fixation. This is principally due to the large activation energy for ground-state nitrogen-element bond formation and motivates exploration of the photoexcited reactivity of this coordination mode. To provide the foundation for this concept, the photophysics of a dinitrogen-bridged molybdenum complex was explored by ultrafast electronic spectroscopies. The complex absorbs light from the UV to near-IR, and the transitions are predominantly of metal-to-ligand charge transfer (MLCT) character. Five excitation wavelengths (440, 520, 610, 730, and 1150 nm) were employed to access MLCT bands, and the dynamics were probed between 430 and 1600 nm. Despite the large energy space occupied by electronic states (ca. 1.2 eV), the dynamics were independent of the excitation wavelength. In the proposed kinetic model, photoexcitation from a Mo-N═N-Mo centered ground state populates the π*-state delocalized over two terpyridine ligands. Due to a large terpyridine-terpyridine spatial separation, electronic localization occurs within 100 fs, augmented by symmetry breaking. The subsequent interplay of internal conversion and intersystem crossing (ISC) populates the lowest 3MLCT state in 2-3 ps. Decay to the ground state occurs either directly or via a thermally activated metal-centered (3MC) trap state having two time constants (10-15 ps, 23-26 ps [298 K]; 103 ps, 612 ps [77 K]). ISC between 1MLCT and 3MLCT involves migration of energized electron density from the terpyridine π* orbitals to the Mo-N═N-Mo core. Implication of the observed dynamics for the potential N-H bond forming reactivity are discussed.
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Affiliation(s)
- Shahnawaz R Rather
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
| | - Máté J Bezdek
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
| | - Marius Koch
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
| | - Paul J Chirik
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
| | - Gregory D Scholes
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
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25
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Pan J, Gelzinis A, Chorošajev V, Vengris M, Senlik SS, Shen JR, Valkunas L, Abramavicius D, Ogilvie JP. Ultrafast energy transfer within the photosystem II core complex. Phys Chem Chem Phys 2018; 19:15356-15367. [PMID: 28574545 DOI: 10.1039/c7cp01673e] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
We report 2D electronic spectroscopy on the photosystem II core complex (PSII CC) at 77 K under different polarization conditions. A global analysis of the high time-resolution 2D data shows rapid, sub-100 fs energy transfer within the PSII CC. It also reveals the 2D spectral signatures of slower energy equilibration processes occurring on several to hundreds of picosecond time scales that are consistent with previous work. Using a recent structure-based model of the PSII CC [Y. Shibata, S. Nishi, K. Kawakami, J. R. Shen and T. Renger, J. Am. Chem. Soc., 2013, 135, 6903], we simulate the energy transfer in the PSII CC by calculating auxiliary time-resolved fluorescence spectra. We obtain the observed sub-100 fs evolution, even though the calculated electronic energy shows almost no dynamics at early times. On the other hand, the electronic-vibrational interaction energy increases considerably over the same time period. We conclude that interactions with vibrational degrees of freedom not only induce population transfer between the excitonic states in the PSII CC, but also reshape the energy landscape of the system. We suggest that the experimentally observed ultrafast energy transfer is a signature of excitonic-polaron formation.
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Affiliation(s)
- Jie Pan
- Department of Physics, University of Michigan, Ann Arbor, 48109, USA.
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26
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Oliver TAA. Recent advances in multidimensional ultrafast spectroscopy. ROYAL SOCIETY OPEN SCIENCE 2018; 5:171425. [PMID: 29410844 PMCID: PMC5792921 DOI: 10.1098/rsos.171425] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 12/20/2017] [Indexed: 05/14/2023]
Abstract
Multidimensional ultrafast spectroscopies are one of the premier tools to investigate condensed phase dynamics of biological, chemical and functional nanomaterial systems. As they reach maturity, the variety of frequency domains that can be explored has vastly increased, with experimental techniques capable of correlating excitation and emission frequencies from the terahertz through to the ultraviolet. Some of the most recent innovations also include extreme cross-peak spectroscopies that directly correlate the dynamics of electronic and vibrational states. This review article summarizes the key technological advances that have permitted these recent advances, and the insights gained from new multidimensional spectroscopic probes.
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Affiliation(s)
- Thomas A. A. Oliver
- School of Chemistry, Cantock's Close, University of Bristol, Bristol BS8 1TS, UK
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27
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Seiler H, Palato S, Kambhampati P. Coherent multi-dimensional spectroscopy at optical frequencies in a single beam with optical readout. J Chem Phys 2017; 147:094203. [DOI: 10.1063/1.4990500] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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28
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Ultrafast coherence transfer in DNA-templated silver nanoclusters. Nat Commun 2017; 8:15577. [PMID: 28548085 PMCID: PMC5493596 DOI: 10.1038/ncomms15577] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2016] [Accepted: 04/06/2017] [Indexed: 12/16/2022] Open
Abstract
DNA-templated silver nanoclusters of a few tens of atoms or less have come into prominence over the last several years due to very strong absorption and efficient emission. Applications in microscopy and sensing have already been realized, however little is known about the excited-state structure and dynamics in these clusters. Here we report on a multidimensional spectroscopy investigation of the energy-level structure and the early-time relaxation cascade, which eventually results in the population of an emitting state. We find that the ultrafast intramolecular relaxation is strongly coupled to a specific vibrational mode, resulting in the concerted transfer of population and coherence between excited states on a sub-100 fs timescale. DNA-templated silver nanoclusters possess desirable optical properties, but their excited state dynamics remain poorly understood. Here the authors show that intracluster relaxations in such clusters are strongly coupled to a vibrational mode, resulting in ultrafast concerted transfer of population and coherence between excited states.
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29
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Wang C, Flanagan ML, McGillicuddy RD, Zheng H, Ginzburg AR, Yang X, Moffat K, Engel GS. Bacteriophytochrome Photoisomerization Proceeds Homogeneously Despite Heterogeneity in Ground State. Biophys J 2016; 111:2125-2134. [PMID: 27851937 PMCID: PMC5113153 DOI: 10.1016/j.bpj.2016.10.017] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2016] [Revised: 09/21/2016] [Accepted: 10/11/2016] [Indexed: 11/21/2022] Open
Abstract
Phytochromes are red/far-red photoreceptors that are widely distributed in plants and prokaryotes. Ultrafast photoisomerization of a double bond in a biliverdin cofactor or other linear tetrapyrrole drives their photoactivity, but their photodynamics are only partially understood. Multiexponential dynamics were observed in previous ultrafast spectroscopic studies and were attributed to heterogeneous populations of the pigment-protein complex. In this work, two-dimensional photon echo spectroscopy was applied to study dynamics of the bacteriophytochromes RpBphP2 and PaBphP. Two-dimensional photon echo spectroscopy can simultaneously resolve inhomogeneity in ensembles and fast dynamics by correlating pump wavelength with the emitted signal wavelength. The distribution of absorption and emission energies within the same state indicates an ensemble of heterogeneous protein environments that are spectroscopically distinct. However, the lifetimes of the dynamics are uniform across the ensemble, suggesting a homogeneous model involving sequential intermediates for the initial photodynamics of isomerization.
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Affiliation(s)
- Cheng Wang
- Department of Chemistry, The James Franck Institute, Institute for Biophysical Dyanmics, The University of Chicago, Chicago, Illinois
| | - Moira L Flanagan
- Graduate Program in Biophysical Science, The James Franck Institute, Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois
| | - Ryan D McGillicuddy
- Department of Chemistry, The James Franck Institute, Institute for Biophysical Dyanmics, The University of Chicago, Chicago, Illinois
| | - Haibin Zheng
- Department of Chemistry, The James Franck Institute, Institute for Biophysical Dyanmics, The University of Chicago, Chicago, Illinois
| | - Alan Ruvim Ginzburg
- Department of Chemistry, The James Franck Institute, Institute for Biophysical Dyanmics, The University of Chicago, Chicago, Illinois
| | - Xiaojing Yang
- Department of Biochemistry and Molecular Biology, and Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois
| | - Keith Moffat
- Department of Biochemistry and Molecular Biology, and Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois
| | - Gregory S Engel
- Department of Chemistry, The James Franck Institute, Institute for Biophysical Dyanmics, The University of Chicago, Chicago, Illinois.
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30
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Dostál J, Benešová B, Brixner T. Two-dimensional electronic spectroscopy can fully characterize the population transfer in molecular systems. J Chem Phys 2016; 145:124312. [DOI: 10.1063/1.4962577] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Affiliation(s)
- Jakub Dostál
- Institut für Physikalische und Theoretische Chemie, Universität Würzburg, Am Hubland, 97074 Würzburg, Germany
| | - Barbora Benešová
- Institut für Mathematik, Universität Würzburg, Emil-Fischer-Straße 40, 97074 Würzburg, Germany
| | - Tobias Brixner
- Institut für Physikalische und Theoretische Chemie, Universität Würzburg, Am Hubland, 97074 Würzburg, Germany
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31
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Thyrhaug E, Žídek K, Dostál J, Bína D, Zigmantas D. Exciton Structure and Energy Transfer in the Fenna-Matthews-Olson Complex. J Phys Chem Lett 2016; 7:1653-1660. [PMID: 27082631 DOI: 10.1021/acs.jpclett.6b00534] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
The Fenna-Matthews-Olson (FMO) photosynthetic complex found in green sulfur bacteria has over the last decades been one of the favorite "model" systems for biological energy transfer. However, even after 40 years of studies, quantitative knowledge about its energy-transfer properties is limited. Here, two-dimensional electronic spectroscopy with full polarization control is used to provide an accurate description of the electronic structure and population dynamics in the complex. The sensitivity of the technique has further allowed us to spectroscopically identify the eighth bacterio-chlorophyll molecule recently discovered in the crystal structure. The time evolution of the spectral structure, covering time scales from tens of femtoseconds up to a nanosecond, reflects the energy flow in FMO and enables us to extract an unambiguous energy-transfer scheme.
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Affiliation(s)
- Erling Thyrhaug
- Department of Chemical Physics, Lund University , P.O. Box 124, 22100 Lund, Sweden
| | - Karel Žídek
- Department of Chemical Physics, Lund University , P.O. Box 124, 22100 Lund, Sweden
| | - Jakub Dostál
- Department of Chemical Physics, Lund University , P.O. Box 124, 22100 Lund, Sweden
- Institut für Physikalische und Theoretische Chemie, Universität Würzburg , Am Hubland, D-97074 Würzburg, Germany
| | - David Bína
- Biology Centre CAS, Branišovská 31, and Faculty of Science, University of South Bohemia , Branišovská 1760, 370 05 České Budějovice, Czech Republic
| | - Donatas Zigmantas
- Department of Chemical Physics, Lund University , P.O. Box 124, 22100 Lund, Sweden
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32
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Cassette E, Dean JC, Scholes GD. Two-Dimensional Visible Spectroscopy For Studying Colloidal Semiconductor Nanocrystals. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2016; 12:2234-44. [PMID: 26849032 DOI: 10.1002/smll.201502733] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2015] [Indexed: 05/27/2023]
Abstract
Possibilities offered by 2D visible spectroscopy for the investigation of the properties of excitons in colloidal semiconductor nanocrystals are overviewed, with a particular focus on their ultrafast dynamics. The technique of 2D electronic spectroscopy is illustrated with several examples showing its advantages compared to 1D ultrafast spectroscopic techniques (transient absorption and time-resolved photoluminescence).
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Affiliation(s)
- Elsa Cassette
- Department of Chemistry, Princeton University, Princeton, NJ, 08544, USA
| | - Jacob C Dean
- Department of Chemistry, Princeton University, Princeton, NJ, 08544, USA
| | - Gregory D Scholes
- Department of Chemistry, Princeton University, Princeton, NJ, 08544, USA
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33
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Singh VP, Westberg M, Wang C, Dahlberg PD, Gellen T, Gardiner AT, Cogdell RJ, Engel GS. Towards quantification of vibronic coupling in photosynthetic antenna complexes. J Chem Phys 2016; 142:212446. [PMID: 26049466 DOI: 10.1063/1.4921324] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Photosynthetic antenna complexes harvest sunlight and efficiently transport energy to the reaction center where charge separation powers biochemical energy storage. The discovery of existence of long lived quantum coherence during energy transfer has sparked the discussion on the role of quantum coherence on the energy transfer efficiency. Early works assigned observed coherences to electronic states, and theoretical studies showed that electronic coherences could affect energy transfer efficiency--by either enhancing or suppressing transfer. However, the nature of coherences has been fiercely debated as coherences only report the energy gap between the states that generate coherence signals. Recent works have suggested that either the coherences observed in photosynthetic antenna complexes arise from vibrational wave packets on the ground state or, alternatively, coherences arise from mixed electronic and vibrational states. Understanding origin of coherences is important for designing molecules for efficient light harvesting. Here, we give a direct experimental observation from a mutant of LH2, which does not have B800 chromophores, to distinguish between electronic, vibrational, and vibronic coherence. We also present a minimal theoretical model to characterize the coherences both in the two limiting cases of purely vibrational and purely electronic coherence as well as in the intermediate, vibronic regime.
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Affiliation(s)
- V P Singh
- Department of Chemistry, The James Franck Institute and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - M Westberg
- Department of Chemistry, The James Franck Institute and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - C Wang
- Department of Chemistry, The James Franck Institute and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - P D Dahlberg
- Graduate Program in the Biophysical Sciences, The James Franck Institute and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - T Gellen
- Department of Chemistry, The James Franck Institute and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - A T Gardiner
- Department of Botany, Institute of Molecular Cell and Systems Biology, University of Glasgow, Glasgow, Scotland
| | - R J Cogdell
- Department of Botany, Institute of Molecular Cell and Systems Biology, University of Glasgow, Glasgow, Scotland
| | - G S Engel
- Department of Chemistry, The James Franck Institute and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
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34
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MacGowan SA, Senge MO. Contribution of bacteriochlorophyll conformation to the distribution of site-energies in the FMO protein. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2016; 1857:427-42. [PMID: 26851682 DOI: 10.1016/j.bbabio.2016.02.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2015] [Revised: 01/30/2016] [Accepted: 02/01/2016] [Indexed: 10/22/2022]
Abstract
The structural data for the Fenna-Matthews-Olson (FMO) protein indicate that the bacteriochlorophylls (BChls) display a significant degree of conformational heterogeneity of their peripheral substituents and the protein-induced nonplanar skeletal deformations of the tetrapyrrole macrocycle. As electronic properties of chromophores are altered by such differences, a conformational effect may influence the site-energies of specific pigments and thus play a role in mediating the excitation energy transfer dynamics, but this has not yet been established. The difficulty of assessing this question is shown to be partly the result of the inability of the sequential truncation approach usually employed to account for interactions between the conformations of the macrocycle and its substituents and an alternative approach is suggested. By assigning the BChl atoms to meaningful atom groups and performing all possible permutations of partial optimizations in a full-factorial design, where each group is either frozen in the crystal geometry or optimized in vacuo, followed by excited state calculations on each resulting structure (PM6//ZIndo/S), the specific effects of the conformations of each BChl component as well as mutual interactions between the molecular fragments on the site-energy can be delineated. This factorial relaxation procedure gives different estimates of the macrocycle conformational perturbation than the approach of sequentially truncating the BChl periphery. The results were evaluated in the context of published site-energies for the FMO pigments from three species to identify how conformational effects contribute to their distribution and instances of cross-species conservation and functional divergence of the BChl nonplanarity conformational contribution are described.
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Affiliation(s)
- Stuart A MacGowan
- School of Chemistry, SFI Tetrapyrrole Laboratory, Trinity Biomedical Sciences Institute, 152-160 Pearse Street, Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Mathias O Senge
- School of Chemistry, SFI Tetrapyrrole Laboratory, Trinity Biomedical Sciences Institute, 152-160 Pearse Street, Trinity College Dublin, The University of Dublin, Dublin 2, Ireland.
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35
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Bakulin AA, Silva C, Vella E. Ultrafast Spectroscopy with Photocurrent Detection: Watching Excitonic Optoelectronic Systems at Work. J Phys Chem Lett 2016; 7:250-8. [PMID: 26711855 PMCID: PMC4819534 DOI: 10.1021/acs.jpclett.5b01955] [Citation(s) in RCA: 59] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2015] [Accepted: 12/29/2015] [Indexed: 05/22/2023]
Abstract
While ultrafast spectroscopy with photocurrent detection was almost unknown before 2012, in the last 3 years, a number of research groups from different fields have independently developed ultrafast electric probe approaches and reported promising pilot studies. Here, we discuss these recent advances and provide our perspective on how photocurrent detection successfully overcomes many limitations of all-optical methods, which makes it a technique of choice when device photophysics is concerned. We also highlight compelling existing problems and research questions and suggest ways for further development, outlining the potential breakthroughs to be expected in the near future using photocurrent ultrafast optical probes.
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Affiliation(s)
- Artem A. Bakulin
- Cavendish Laboratory, University of Cambridge, Cambridge CB3 0HE, United Kingdom
| | - Carlos Silva
- Département de physique & Regroupement
québécois sur les matériaux de pointe, Université de Montréal, C.P. 6128, Succursale centre-ville, Montréal, Québec H3C 3J7, Canada
| | - Eleonora Vella
- Département de physique & Regroupement
québécois sur les matériaux de pointe, Université de Montréal, C.P. 6128, Succursale centre-ville, Montréal, Québec H3C 3J7, Canada
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36
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Wehner J, Engel V. Two-dimensional optical spectroscopy of homo- and heterodimers. Phys Chem Chem Phys 2016; 18:32910-32920. [DOI: 10.1039/c6cp04936b] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We theoretically study the two-dimensional (2D) spectroscopy of molecular dimers.
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Affiliation(s)
- Johannes Wehner
- Universität Würzburg
- Institut für Physikalische und Theoretische Chemie
- 97074 Würzburg
- Germany
| | - Volker Engel
- Universität Würzburg
- Institut für Physikalische und Theoretische Chemie
- 97074 Würzburg
- Germany
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37
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Vibronic origin of long-lived coherence in an artificial molecular light harvester. Nat Commun 2015; 6:7755. [PMID: 26158602 PMCID: PMC4510969 DOI: 10.1038/ncomms8755] [Citation(s) in RCA: 103] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2015] [Accepted: 06/04/2015] [Indexed: 01/11/2023] Open
Abstract
Natural and artificial light-harvesting processes have recently gained new interest. Signatures of long-lasting coherence in spectroscopic signals of biological systems have been repeatedly observed, albeit their origin is a matter of ongoing debate, as it is unclear how the loss of coherence due to interaction with the noisy environments in such systems is averted. Here we report experimental and theoretical verification of coherent exciton–vibrational (vibronic) coupling as the origin of long-lasting coherence in an artificial light harvester, a molecular J-aggregate. In this macroscopically aligned tubular system, polarization-controlled 2D spectroscopy delivers an uncongested and specific optical response as an ideal foundation for an in-depth theoretical description. We derive analytical expressions that show under which general conditions vibronic coupling leads to prolonged excited-state coherence. Two-dimensional spectroscopy revealed oscillatory signals in photosynthesis' exciton dynamics, but crowded spectra impede the identification of what sustains the oscillations. Here the authors probe an J-aggregate, whose uncongested response shows that vibronic coupling is responsible for the sustained coherence.
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38
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Senlik SS, Policht VR, Ogilvie JP. Two-Color Nonlinear Spectroscopy for the Rapid Acquisition of Coherent Dynamics. J Phys Chem Lett 2015; 6:2413-20. [PMID: 26266711 DOI: 10.1021/acs.jpclett.5b00861] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
There has been considerable recent interest in the observation of coherent dynamics in photosynthetic systems by 2D electronic spectroscopy (2DES). In particular, coherences that persist during the "waiting time" in a 2DES experiment have been attributed to electronic, vibrational, and vibronic origins in various systems. The typical method for characterizing these coherent dynamics requires the acquisition of 2DES spectra as a function of waiting time, essentially a 3DES measurement. Such experiments require lengthy data acquisition times that degrade the signal-to-noise of the recorded coherent dynamics. We present a rapid and high signal-to-noise pulse-shaping-based approach for the characterization of coherent dynamics. Using chlorophyll a, we demonstrate that this method retains much of the information content of a 3DES measurement and provides insight into the physical origin of the coherent dynamics, distinguishing between ground and excited state coherences. It also enables high resolution determination of ground and excited state frequencies.
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Affiliation(s)
- S Seckin Senlik
- †Department of Physics, University of Michigan, Ann Arbor, 48109, United States
| | - Veronica R Policht
- ‡Applied Physics Program, University of Michigan, Ann Arbor, 48109, United States
| | - Jennifer P Ogilvie
- †Department of Physics, University of Michigan, Ann Arbor, 48109, United States
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39
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Wilkins DM, Dattani NS. Why Quantum Coherence Is Not Important in the Fenna–Matthews–Olsen Complex. J Chem Theory Comput 2015; 11:3411-9. [DOI: 10.1021/ct501066k] [Citation(s) in RCA: 74] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Affiliation(s)
- David M. Wilkins
- Physical and Theoretical
Chemistry Laboratory, Oxford University, South Parks Road, Oxford, OX1 3QZ, United Kingdom
| | - Nikesh S. Dattani
- Quantum
Chemistry Laboratory,
Department of Chemistry, Kyoto University, 606-8502, Kyoto, Japan
- School of Materials Science
and Engineering, Nanyang Technological University, Block N4.1, Nanyang Avenue, Singapore 639798
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40
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Schlau-Cohen GS. Principles of light harvesting from single photosynthetic complexes. Interface Focus 2015; 5:20140088. [PMID: 26052423 DOI: 10.1098/rsfs.2014.0088] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Photosynthetic systems harness sunlight to power most life on Earth. In the initial steps of photosynthetic light harvesting, absorbed energy is converted to chemical energy with near-unity quantum efficiency. This is achieved by an efficient, directional and regulated flow of energy through a network of proteins. Here, we discuss the following three key principles of this flow and of photosynthetic light harvesting: thermal fluctuations of the protein structure; intrinsic conformational switches with defined functional consequences; and environmentally triggered conformational switches. Through these principles, photosynthetic systems balance two types of operational costs: metabolic costs, or the cost of maintaining and running the molecular machinery, and opportunity costs, or the cost of losing any operational time. Understanding how the molecular machinery and dynamics are designed to balance these costs may provide a blueprint for improved artificial light-harvesting devices. With a multi-disciplinary approach combining knowledge of biology, this blueprint could lead to low-cost and more effective solar energy conversion. Photosynthetic systems achieve widespread light harvesting across the Earth's surface; in the face of our growing energy needs, this is functionality we need to replicate, and perhaps emulate.
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Affiliation(s)
- G S Schlau-Cohen
- Department of Chemistry , Massachusetts Institute of Technology , 77 Massachusetts Avenue, 6-225, Cambridge, MA 02139 , USA
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41
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Beck WF, Bishop MM, Roscioli JD, Ghosh S, Frank HA. Excited state conformational dynamics in carotenoids: Dark intermediates and excitation energy transfer. Arch Biochem Biophys 2015; 572:175-183. [DOI: 10.1016/j.abb.2015.02.016] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2014] [Revised: 01/24/2015] [Accepted: 02/13/2015] [Indexed: 11/26/2022]
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42
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Fuller FD, Ogilvie JP. Experimental implementations of two-dimensional fourier transform electronic spectroscopy. Annu Rev Phys Chem 2015; 66:667-90. [PMID: 25664841 DOI: 10.1146/annurev-physchem-040513-103623] [Citation(s) in RCA: 164] [Impact Index Per Article: 18.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Two-dimensional electronic spectroscopy (2DES) reveals connections between an optical excitation at a given frequency and the signals it creates over a wide range of frequencies. These connections, manifested as cross-peak locations and their lineshapes, reflect the underlying electronic and vibrational structure of the system under study. How these spectroscopic signatures evolve in time reveals the system dynamics and provides a detailed picture of coherent and incoherent processes. 2DES is rapidly maturing and has already found numerous applications, including studies of photosynthetic energy transfer and photochemical reactions and many-body interactions in nanostructured materials. Many systems of interest contain electronic transitions spanning the ultraviolet to the near infrared and beyond. Most 2DES measurements to date have explored a relatively small frequency range. We discuss the challenges of implementing 2DES and compare and contrast different approaches in terms of their information content, ease of implementation, and potential for broadband measurements.
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Affiliation(s)
- Franklin D Fuller
- Department of Physics, University of Michigan, Ann Arbor, Michigan 48109;
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43
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Huang JY, Lin CY, Liu WS, Chyi JI. Quantum control study of ultrafast optical responses in semiconductor quantum dot devices. OPTICS EXPRESS 2014; 22:30815-30825. [PMID: 25607030 DOI: 10.1364/oe.22.030815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Two quantum control spectroscopic techniques were applied to study InAs quantum dot (QD) devices, which contain different strain-reducing layers. By adaptively control light matter interaction, a delayed resonant response from the InAs QDs was found to be encoded into the optimal phase profile of ultrafast optical pulse used. We verified the delayed resonant response to originate from excitons coupled to acoustic phonons of InAs QDs with two-dimensional coherent spectroscopy. Our study yields valuable dynamical information that can deepen our understanding of the coherent coupling process of exciton in the quantum-confined systems.
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44
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Seibt J, Pullerits T. Combined treatment of relaxation and fluctuation dynamics in the calculation of two-dimensional electronic spectra. J Chem Phys 2014; 141:114106. [DOI: 10.1063/1.4895401] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Affiliation(s)
- Joachim Seibt
- Department of Chemical Physics, Lund University, Box 124, SE-2100 Lund, Sweden
| | - Tõnu Pullerits
- Department of Chemical Physics, Lund University, Box 124, SE-2100 Lund, Sweden
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45
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Heisler IA, Moca R, Camargo FVA, Meech SR. Two-dimensional electronic spectroscopy based on conventional optics and fast dual chopper data acquisition. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2014; 85:063103. [PMID: 24985795 DOI: 10.1063/1.4879822] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
We report an improved experimental scheme for two-dimensional electronic spectroscopy (2D-ES) based solely on conventional optical components and fast data acquisition. This is accomplished by working with two choppers synchronized to a 10 kHz repetition rate amplified laser system. We demonstrate how scattering and pump-probe contributions can be removed during 2D measurements and how the pump probe and local oscillator spectra can be generated and saved simultaneously with each population time measurement. As an example the 2D-ES spectra for cresyl violet were obtained. The resulting 2D spectra show a significant oscillating signal during population evolution time which can be assigned to an intramolecular vibrational mode.
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Affiliation(s)
- Ismael A Heisler
- School of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom
| | - Roberta Moca
- School of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom
| | - Franco V A Camargo
- School of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom
| | - Stephen R Meech
- School of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom
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46
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Fidler AF, Singh VP, Long PD, Dahlberg PD, Engel GS. Probing energy transfer events in the light harvesting complex 2 (LH2) of Rhodobacter sphaeroides with two-dimensional spectroscopy. J Chem Phys 2014; 139:155101. [PMID: 24160544 DOI: 10.1063/1.4824637] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
Abstract
Excitation energy transfer events in the photosynthetic light harvesting complex 2 (LH2) of Rhodobacter sphaeroides are investigated with polarization controlled two-dimensional electronic spectroscopy. A spectrally broadened pulse allows simultaneous measurement of the energy transfer within and between the two absorption bands at 800 nm and 850 nm. The phased all-parallel polarization two-dimensional spectra resolve the initial events of energy transfer by separating the intra-band and inter-band relaxation processes across the two-dimensional map. The internal dynamics of the 800 nm region of the spectra are resolved as a cross peak that grows in on an ultrafast time scale, reflecting energy transfer between higher lying excitations of the B850 chromophores into the B800 states. We utilize a polarization sequence designed to highlight the initial excited state dynamics which uncovers an ultrafast transfer component between the two bands that was not observed in the all-parallel polarization data. We attribute the ultrafast transfer component to energy transfer from higher energy exciton states to lower energy states of the strongly coupled B850 chromophores. Connecting the spectroscopic signature to the molecular structure, we reveal multiple relaxation pathways including a cyclic transfer of energy between the two rings of the complex.
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Affiliation(s)
- Andrew F Fidler
- Department of Chemistry, The Institute for Biophysical Dynamics, and The James Franck Institute, The University of Chicago, Chicago, Illinois 60637, USA
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47
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Jumper CC, Anna JM, Stradomska A, Schins J, Myahkostupov M, Prusakova V, Oblinsky DG, Castellano FN, Knoester J, Scholes GD. Intramolecular radiationless transitions dominate exciton relaxation dynamics. Chem Phys Lett 2014. [DOI: 10.1016/j.cplett.2014.03.007] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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48
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Tollerud JO, Hall CR, Davis JA. Isolating quantum coherence using coherent multi-dimensional spectroscopy with spectrally shaped pulses. OPTICS EXPRESS 2014; 22:6719-6733. [PMID: 24664021 DOI: 10.1364/oe.22.006719] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
We demonstrate how spectral shaping in coherent multidimensional spectroscopy can isolate specific signal pathways and directly access quantitative details. By selectively exciting pathways involving a coherent superposition of exciton states we are able to identify, isolate and analyse weak coherent coupling between spatially separated excitons in an asymmetric double quantum well. Analysis of the isolated signal elucidates details of the coherent interactions between the spatially separated excitons. With a dynamic range exceeding 10(4) in electric field amplitude, this approach facilitates quantitative comparisons of different signal pathways and a comprehensive description of the electronic states and their interactions.
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49
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Zheng H, Caram JR, Dahlberg PD, Rolczynski BS, Viswanathan S, Dolzhnikov DS, Khadivi A, Talapin DV, Engel GS. Dispersion-free continuum two-dimensional electronic spectrometer. APPLIED OPTICS 2014; 53:1909-17. [PMID: 24663470 PMCID: PMC4349747 DOI: 10.1364/ao.53.001909] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2013] [Accepted: 02/06/2014] [Indexed: 05/06/2023]
Abstract
Electronic dynamics span broad energy scales with ultrafast time constants in the condensed phase. Two-dimensional (2D) electronic spectroscopy permits the study of these dynamics with simultaneous resolution in both frequency and time. In practice, this technique is sensitive to changes in nonlinear dispersion in the laser pulses as time delays are varied during the experiment. We have developed a 2D spectrometer that uses broadband continuum generated in argon as the light source. Using this visible light in phase-sensitive optical experiments presents new challenges in implementation. We demonstrate all-reflective interferometric delays using angled stages. Upon selecting an ~180 nm window of the available bandwidth at ~10 fs compression, we probe the nonlinear response of broadly absorbing CdSe quantum dots and electronic transitions of Chlorophyll a.
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Affiliation(s)
- Haibin Zheng
- Department of Chemistry, The James Franck Institute, and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - Justin R. Caram
- Department of Chemistry, The James Franck Institute, and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - Peter D. Dahlberg
- Program in the Biophysical Sciences, The James Franck Institute, and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - Brian S. Rolczynski
- Department of Chemistry, The James Franck Institute, and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - Subha Viswanathan
- Department of Chemistry, The James Franck Institute, and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - Dmitriy S. Dolzhnikov
- Department of Chemistry and The James Franck Institute, The University of Chicago, Chicago, Illinois 60637, USA
| | - Amir Khadivi
- Department of Chemistry, The James Franck Institute, and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
| | - Dmitri V. Talapin
- Department of Chemistry and The James Franck Institute, The University of Chicago, Chicago, Illinois 60637, USA
| | - Gregory S. Engel
- Department of Chemistry, The James Franck Institute, and The Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois 60637, USA
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50
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Ryu IS, Dong H, Fleming GR. Role of Electronic-Vibrational Mixing in Enhancing Vibrational Coherences in the Ground Electronic States of Photosynthetic Bacterial Reaction Center. J Phys Chem B 2014; 118:1381-8. [DOI: 10.1021/jp4100476] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Ian Seungwan Ryu
- Department of Chemistry, University of California—Berkeley, and Physical Bioscience
Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Hui Dong
- Department of Chemistry, University of California—Berkeley, and Physical Bioscience
Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Graham R. Fleming
- Department of Chemistry, University of California—Berkeley, and Physical Bioscience
Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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