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Alexandre MTA, Krüger TPJ, Pascal AA, Veremeienko V, Llansola-Portoles MJ, Gundermann K, van Grondelle R, Büchel C, Robert B. Molecular events accompanying aggregation-induced energy quenching in fucoxanthin-chlorophyll proteins. BIOCHIMICA ET BIOPHYSICA ACTA. BIOENERGETICS 2024; 1865:149500. [PMID: 39074571 DOI: 10.1016/j.bbabio.2024.149500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 07/21/2024] [Accepted: 07/26/2024] [Indexed: 07/31/2024]
Abstract
In high light, the antenna system in oxygenic photosynthetic organisms switches to a photoprotective mode, dissipating excess energy in a process called non-photochemical quenching (NPQ). Diatoms exhibit very efficient NPQ, accompanied by a xanthophyll cycle in which diadinoxanthin is de-epoxidized into diatoxanthin. Diatoms accumulate pigments from this cycle in high light, and exhibit faster and more pronounced NPQ. The mechanisms underlying NPQ in diatoms remain unclear, but it can be mimicked by aggregation of their isolated light-harvesting complexes, FCP (fucoxanthin chlorophyll-a/c protein). We assess this model system by resonance Raman measurements of two peripheral FCPs, trimeric FCPa and nonameric FCPb, isolated from high- and low-light-adapted cells (LL,HL). Quenching is associated with a reorganisation of these proteins, affecting the conformation of their bound carotenoids, and in a manner which is highly dependent on the protein considered. FCPa from LL diatoms exhibits significant changes in diadinoxanthin structure, together with a smaller conformational change of at least one fucoxanthin. For these LL-FCPa, quenching is associated with consecutive events, displaying distinct spectral signatures, and its amplitude correlates with the planarity of the diadinoxanthin structure. HL-FCPa aggregation is associated with a change in planarity of a 515-nm-absorbing fucoxanthin, and, to a lesser extent, of diadinoxanthin. Finally, in FCPb, a blue-absorbing fucoxanthin is primarily affected. FCPs thus possess a plastic structure, undergoing several conformational changes upon aggregation, dependent upon their precise composition and structure. NPQ in diatoms may therefore arise from a combination of structural changes, dependent on the environment the cells are adapted to.
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Affiliation(s)
- Maxime T A Alexandre
- Institute of Integrative Biology of the Cell, CEA, CNRS, Université Paris-Saclay, Avenue de la Terrasse, 91198 Gif sur Yvette, France; Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, De Boelelaan, 1081 HV Amsterdam, the Netherlands
| | - Tjaart P J Krüger
- Department of Physics, Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural Sciences, University of Pretoria, Private bag X20, Hatfield 0028, South Africa
| | - Andrew A Pascal
- Institute of Integrative Biology of the Cell, CEA, CNRS, Université Paris-Saclay, Avenue de la Terrasse, 91198 Gif sur Yvette, France.
| | - Vasyl Veremeienko
- Institute of Integrative Biology of the Cell, CEA, CNRS, Université Paris-Saclay, Avenue de la Terrasse, 91198 Gif sur Yvette, France
| | - Manuel J Llansola-Portoles
- Institute of Integrative Biology of the Cell, CEA, CNRS, Université Paris-Saclay, Avenue de la Terrasse, 91198 Gif sur Yvette, France
| | - Kathi Gundermann
- Institute of Molecular Biosciences, Department of Biosciences, Goethe University Frankfurt, Max von Laue Str. 9, 60438 Frankfurt, Germany
| | - Rienk van Grondelle
- Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, De Boelelaan, 1081 HV Amsterdam, the Netherlands
| | - Claudia Büchel
- Institute of Molecular Biosciences, Department of Biosciences, Goethe University Frankfurt, Max von Laue Str. 9, 60438 Frankfurt, Germany
| | - Bruno Robert
- Institute of Integrative Biology of the Cell, CEA, CNRS, Université Paris-Saclay, Avenue de la Terrasse, 91198 Gif sur Yvette, France
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2
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Botha JL, van Heerden B, Krüger TPJ. Advanced analysis of single-molecule spectroscopic data. BIOPHYSICAL REPORTS 2024; 4:100173. [PMID: 39097230 PMCID: PMC11374972 DOI: 10.1016/j.bpr.2024.100173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2024] [Revised: 06/29/2024] [Accepted: 07/25/2024] [Indexed: 08/05/2024]
Abstract
We present Full SMS, a multipurpose graphical user interface (GUI)-based software package for analyzing single-molecule spectroscopy (SMS) data. SMS typically delivers multiparameter data-such as fluorescence brightness, lifetime, and spectra-of molecular- or nanometer-scale particles such as single dye molecules, quantum dots, or fluorescently labeled biological macromolecules. Full SMS allows an unbiased statistical analysis of fluorescence brightness through level resolution and clustering, analysis of fluorescence lifetimes through decay fitting, as well as the calculation of second-order correlation functions and the display of fluorescence spectra and raster-scan images. Additional features include extensive data filtering options, a custom HDF5-based file format, and flexible data export options. The software is open source and written in Python but GUI based so it may be used without any programming knowledge. A multiprocess architecture was employed for computational efficiency. The software is also designed to be easily extendable to include additional import data types and analysis capabilities.
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Affiliation(s)
- Joshua L Botha
- Department of Physics, University of Pretoria, Pretoria, Gauteng, South Africa
| | - Bertus van Heerden
- Department of Physics, University of Pretoria, Pretoria, Gauteng, South Africa; Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, Gauteng, South Africa; National Institute of Theoretical and Computational Sciences (NITheCS), South Africa
| | - Tjaart P J Krüger
- Department of Physics, University of Pretoria, Pretoria, Gauteng, South Africa; Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, Gauteng, South Africa; National Institute of Theoretical and Computational Sciences (NITheCS), South Africa.
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3
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Gelzinis A, Chmeliov J, Tutkus M, Vitulskienė E, Franckevičius M, Büchel C, Robert B, Valkunas L. Fluorescence quenching in aggregates of fucoxanthin-chlorophyll protein complexes: Interplay of fluorescing and dark states. BIOCHIMICA ET BIOPHYSICA ACTA. BIOENERGETICS 2024; 1865:149030. [PMID: 38163538 DOI: 10.1016/j.bbabio.2023.149030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 11/29/2023] [Accepted: 12/21/2023] [Indexed: 01/03/2024]
Abstract
Diatoms, a major group of algae, account for about a quarter of the global primary production on Earth. These photosynthetic organisms face significant challenges due to light intensity variations in their underwater habitat. To avoid photodamage, they have developed very efficient non-photochemical quenching (NPQ) mechanisms. These mechanisms originate in their light-harvesting antenna - the fucoxanthin-chlorophyll protein (FCP) complexes. Spectroscopic studies of NPQ in vivo are often hindered by strongly overlapping signals from the photosystems and their antennae. Fortunately, in vitro FCP aggregates constitute a useful model system to study fluorescence (FL) quenching in diatoms. In this work, we present streak-camera FL measurements on FCPa and FCPb complexes, isolated from a centric diatom Cyclotella meneghiniana, and their aggregates. We find that spectra of non-aggregated FCP are dominated by a single fluorescing species, but the FL spectra of FCP aggregates additionally contain contributions from a redshifted emissive state. We relate this red state to a charge transfer state between chlorophyll c and chlorophyll a molecules. The FL quenching, on the other hand, is due to an additional dark state that involves incoherent energy transfer to the fucoxanthin carotenoids. Overall, the global picture of energy transfer and quenching in FCP aggregates is very similar to that of major light-harvesting complexes in higher plants (LHCII), but microscopic details between FCPs and LHCIIs differ significantly.
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Affiliation(s)
- Andrius Gelzinis
- Department of Molecular Compound Physics, Center for Physical Sciences and Technology, Saulėtekio Ave. 3, 10257 Vilnius, Lithuania; Institute of Chemical Physics, Faculty of Physics, Vilnius University, Saulėtekio Ave. 9-III, 10222 Vilnius, Lithuania
| | - Jevgenij Chmeliov
- Department of Molecular Compound Physics, Center for Physical Sciences and Technology, Saulėtekio Ave. 3, 10257 Vilnius, Lithuania; Institute of Chemical Physics, Faculty of Physics, Vilnius University, Saulėtekio Ave. 9-III, 10222 Vilnius, Lithuania
| | - Marijonas Tutkus
- Department of Molecular Compound Physics, Center for Physical Sciences and Technology, Saulėtekio Ave. 3, 10257 Vilnius, Lithuania; Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio Ave. 7, 10257 Vilnius, Lithuania
| | - Ernesta Vitulskienė
- Department of Molecular Compound Physics, Center for Physical Sciences and Technology, Saulėtekio Ave. 3, 10257 Vilnius, Lithuania
| | - Marius Franckevičius
- Department of Molecular Compound Physics, Center for Physical Sciences and Technology, Saulėtekio Ave. 3, 10257 Vilnius, Lithuania
| | - Claudia Büchel
- Institute of Molecular Biosciences, Goethe University Frankfurt, Max-von-Laue Straße 9, 60438 Frankfurt, Germany
| | - Bruno Robert
- Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France
| | - Leonas Valkunas
- Department of Molecular Compound Physics, Center for Physical Sciences and Technology, Saulėtekio Ave. 3, 10257 Vilnius, Lithuania; Institute of Chemical Physics, Faculty of Physics, Vilnius University, Saulėtekio Ave. 9-III, 10222 Vilnius, Lithuania.
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4
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Maity S, Daskalakis V, Jansen TLC, Kleinekathöfer U. Electric Field Susceptibility of Chlorophyll c Leads to Unexpected Excitation Dynamics in the Major Light-Harvesting Complex of Diatoms. J Phys Chem Lett 2024; 15:2499-2510. [PMID: 38410961 PMCID: PMC10926154 DOI: 10.1021/acs.jpclett.3c03241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 02/04/2024] [Accepted: 02/12/2024] [Indexed: 02/28/2024]
Abstract
Diatoms are one of the most abundant photosynthetic organisms on earth and contribute largely to atmospheric oxygen production. They contain fucoxanthin and chlorophyll-a/c binding proteins (FCPs) as light-harvesting complexes with a remarkable adaptation to the fluctuating light on ocean surfaces. To understand the basis of the photosynthetic process in diatoms, the excitation energy funneling within FCPs must be probed. A state-of-the-art multiscale analysis within a quantum mechanics/molecular mechanics framework has been employed. To this end, the chlorophyll (Chl) excitation energies within the FCP complex from the diatom Phaeodactylum tricornutum have been determined. The Chl-c excitation energies were found to be 5-fold more susceptible to electric fields than those of Chl-a pigments and thus are significantly lower in FCP than in organic solvents. This finding challenges the general belief that the excitation energy of Chl-c is always higher than that of Chl-a in FCP proteins and reveals that Chl-c molecules are much more sensitive to electric fields within protein scaffolds than in Chl-a pigments. The analysis of the linear absorption spectrum and the two-dimensional electronic spectra of the FCP complex strongly supports these findings and allows us to study the excitation transfer within the FCP complex.
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Affiliation(s)
- Sayan Maity
- School
of Science, Constructor University, Campus Ring 1, 28759 Bremen, Germany
| | - Vangelis Daskalakis
- Department
of Chemical Engineering, School of Engineering,
University of Patras, Patras 26504, Greece
| | - Thomas L. C. Jansen
- Zernike
Institute for Advanced Materials, University
of Groningen, Nijenborgh 4, 9747 AG Groningen, Netherlands
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5
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Ansteatt S, Gelfand R, Pelton M, Ptaszek M. Geometry-Independent Ultrafast Energy Transfer in Bioinspired Arrays Containing Electronically Coupled BODIPY Dimers as Energy Donors. Chemistry 2023; 29:e202301571. [PMID: 37494565 DOI: 10.1002/chem.202301571] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Revised: 07/20/2023] [Accepted: 07/21/2023] [Indexed: 07/28/2023]
Abstract
In photosynthetic light-harvesting complexes, strong interaction between chromophores enables efficient absorption of solar radiation and has been suggested to enable ultrafast energy funneling to the reaction center. To examine whether similar effects can be realized in synthetic systems, and to determine the mechanisms of energy transfer, we synthesized and characterized a series of bioinspired arrays containing strongly-coupled BODIPY dimers as energy donors and chlorin derivatives as energy acceptors. The BODIPY dimers feature broad absorption in the range of 500-600 nm, complementing the chlorin absorption to provide absorption across the entire visible spectrum. Ultrafast (~10 ps) energy transfer was observed from photoexcited BODIPY dyads to chlorin subunits. Surprisingly, the energy-transfer rate is nearly independent of the position where the BODIPY dimer is attached to the chlorin and of the type of connecting linker. In addition, the energy-transfer rate from BODIPY dimers to chlorin is slower than the corresponding rate in arrays containing BODIPY monomers. The lower rate, corresponding to less efficient through-bond transfer, is most likely due to weaker electronic coupling between the ground state of the chlorin acceptor and the delocalized electronic state of the BODIPY dimer, compared to the localized state of a BODIPY monomer.
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Affiliation(s)
- Sara Ansteatt
- Department of Chemistry and Biochemistry, University of Maryland, Baltimore County (UMBC), 1000 Hilltop Circle, Baltimore, MD 21250, USA
| | - Rachel Gelfand
- Department of Physics, University of Maryland, Baltimore County (UMBC), 1000 Hilltop Circle, Baltimore, MD 21250, USA
| | - Matthew Pelton
- Department of Chemistry and Biochemistry, University of Maryland, Baltimore County (UMBC), 1000 Hilltop Circle, Baltimore, MD 21250, USA
- Department of Physics, University of Maryland, Baltimore County (UMBC), 1000 Hilltop Circle, Baltimore, MD 21250, USA
| | - Marcin Ptaszek
- Department of Chemistry and Biochemistry, University of Maryland, Baltimore County (UMBC), 1000 Hilltop Circle, Baltimore, MD 21250, USA
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6
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Fridman H, Levy HM, Meir A, Casotto A, Malkinson R, Dehnel J, Yochelis S, Lifshitz E, Bar-Gill N, Collini E, Paltiel Y. Ultrafast Coherent Delocalization Revealed in Multilayer QDs under a Chiral Potential. J Phys Chem Lett 2023; 14:2234-2240. [PMID: 36820505 PMCID: PMC11139383 DOI: 10.1021/acs.jpclett.2c03743] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Accepted: 02/13/2023] [Indexed: 06/18/2023]
Abstract
In recent years, it was found that current passing through chiral molecules exhibits spin preference, an effect known as Chiral Induced Spin Selectivity (CISS). The effect also enables the reduction of scattering and therefore enhances delocalization. As a result, the delocalization of an exciton generated in the dots is not symmetric and relates to the electronic and hole excited spins. In this work utilizing fast spectroscopy on hybrid multilayered QDs with a chiral polypeptide linker system, we probed the interdot chiral coupling on a short time scale. Surprisingly, we found strong coherent coupling and delocalization despite having long 4-nm chiral linkers. We ascribe the results to asymmetric delocalization that is controlled by the electron spin. The effect is not measured when using shorter nonchiral linkers. As the system mimics light-harvesting antennas, the results may shed light on a mechanism of fast and efficient energy transfer in these systems.
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Affiliation(s)
- Hanna
T. Fridman
- Applied
Physics Department, Jerusalem, The Hebrew
University of Jerusalem, Jerusalem 91904, Israel
| | - Hadar Manis Levy
- Department
of Chemical Sciences, University of Padova, Via Marzolo 1, I-35131 Padova, Italy
| | - Amitai Meir
- Applied
Physics Department, Jerusalem, The Hebrew
University of Jerusalem, Jerusalem 91904, Israel
| | - Andrea Casotto
- Department
of Chemical Sciences, University of Padova, Via Marzolo 1, I-35131 Padova, Italy
| | - Rotem Malkinson
- Applied
Physics Department, Jerusalem, The Hebrew
University of Jerusalem, Jerusalem 91904, Israel
| | - Joanna Dehnel
- Nancy
and Stephen Grand Technion Energy Program, Russell Berrie Nanotechnology
Institute, Quantum Information Center, Schulich Faculty of Chemistry,
Solid State Institute, Technion Israel Institute
of Technology, Solid Stat, IL-3200003 Haifa, Israel
| | - Shira Yochelis
- Applied
Physics Department, Jerusalem, The Hebrew
University of Jerusalem, Jerusalem 91904, Israel
| | - Efrat Lifshitz
- Nancy
and Stephen Grand Technion Energy Program, Russell Berrie Nanotechnology
Institute, Quantum Information Center, Schulich Faculty of Chemistry,
Solid State Institute, Technion Israel Institute
of Technology, Solid Stat, IL-3200003 Haifa, Israel
| | - Nir Bar-Gill
- Applied
Physics Department, Jerusalem, The Hebrew
University of Jerusalem, Jerusalem 91904, Israel
- The Racah
Institute of Physics, The Hebrew University
of Jerusalem, Jerusalem 91904, Israel
- The Center
for Nanoscience and Nanotechnology, The
Hebrew University of Jerusalem, Jerusalem 91904, Israel
| | - Elisabetta Collini
- Department
of Chemical Sciences, University of Padova, Via Marzolo 1, I-35131 Padova, Italy
| | - Yossi Paltiel
- Applied
Physics Department, Jerusalem, The Hebrew
University of Jerusalem, Jerusalem 91904, Israel
- The Center
for Nanoscience and Nanotechnology, The
Hebrew University of Jerusalem, Jerusalem 91904, Israel
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7
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van Heerden B, Kruger T. Theoretical comparison of real-time feedback-driven single-particle tracking techniques. J Chem Phys 2022; 157:084111. [DOI: 10.1063/5.0096729] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Real-time feedback-driven single-particle tracking is a technique that uses feedbackcontrol to enable single-molecule spectroscopy of freely diffusing particles in nativeor near-native environments. A number of different RT-FD-SPT approaches exist,and comparisons between methods based on experimental results are of limited usedue to differences in samples and setups. In this study, we used statistical calcu-lations and dynamical simulations to directly compare the performance of differentmethods. The methods considered were the orbital method, the Knight's Tour (gridscan) method and MINFLUX, and we considered both fluorescence-based and inter-ferometric scattering (iSCAT) approaches. There is a fundamental trade-off betweenprecision and speed, with the Knight's Tour method being able to track the fastestdiffusion but with low precision, and MINFLUX being the most precise but onlytracking slow diffusion. To compare iSCAT and fluorescence, different biologicalsamples were considered, including labeled and intrinsically fluorescent samples. Thesuccess of iSCAT as compared to fluorescence is strongly dependent on the particlesize and the density and photophysical properties of the fluorescent particles. Usinga wavelength for iSCAT that is negligibly absorbed by the tracked particle allowsan increased illumination intensity, which results in iSCAT providing better trackingfor most samples. This work highlights the fundamental aspects of performance inRT-FD-SPT and should assist with the selection of an appropriate method for a par-ticular application. The approach used can easily be extended to other RT-FD-SPTmethods.
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8
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van Heerden B, Vickers NA, Krüger TPJ, Andersson SB. Real-Time Feedback-Driven Single-Particle Tracking: A Survey and Perspective. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2022; 18:e2107024. [PMID: 35758534 PMCID: PMC9308725 DOI: 10.1002/smll.202107024] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2021] [Revised: 04/07/2022] [Indexed: 05/14/2023]
Abstract
Real-time feedback-driven single-particle tracking (RT-FD-SPT) is a class of techniques in the field of single-particle tracking that uses feedback control to keep a particle of interest in a detection volume. These methods provide high spatiotemporal resolution on particle dynamics and allow for concurrent spectroscopic measurements. This review article begins with a survey of existing techniques and of applications where RT-FD-SPT has played an important role. Each of the core components of RT-FD-SPT are systematically discussed in order to develop an understanding of the trade-offs that must be made in algorithm design and to create a clear picture of the important differences, advantages, and drawbacks of existing approaches. These components are feedback tracking and control, ranging from simple proportional-integral-derivative control to advanced nonlinear techniques, estimation to determine particle location from the measured data, including both online and offline algorithms, and techniques for calibrating and characterizing different RT-FD-SPT methods. Then a collection of metrics for RT-FD-SPT is introduced to help guide experimentalists in selecting a method for their particular application and to help reveal where there are gaps in the techniques that represent opportunities for further development. Finally, this review is concluded with a discussion on future perspectives in the field.
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Affiliation(s)
- Bertus van Heerden
- Department of Physics, University of Pretoria, Pretoria, 0002, South Africa
- Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002, South Africa
| | - Nicholas A Vickers
- Department of Mechanical Engineering, Boston University, Boston, MA, 02215, USA
| | - Tjaart P J Krüger
- Department of Physics, University of Pretoria, Pretoria, 0002, South Africa
- Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002, South Africa
| | - Sean B Andersson
- Department of Mechanical Engineering, Boston University, Boston, MA, 02215, USA
- Division of Systems Engineering, Boston University, Boston, MA, 02215, USA
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Tselios C, Varotsis C. Evidence for reversible light-dependent transitions in the photosynthetic pigments of diatoms. RSC Adv 2022; 12:31555-31563. [PMID: 36380945 PMCID: PMC9631684 DOI: 10.1039/d2ra05284a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 10/31/2022] [Indexed: 11/06/2022] Open
Abstract
Marine diatoms contribute to oxygenic photosynthesis and carbon fixation and handle large changes under variable light intensity on a regular basis. The unique light-harvesting apparatus of diatoms are the fucoxanthin–chlorophyll a/c-binding proteins (FCPs). Here, we show the enhancement of chlorophyll a/c (Chl a/c), fucoxanthin (Fx), and diadinoxanthin (Dd) marker bands in the Raman spectra of the centric diatom T. pseudonana, which allows distinction of the pigment content in the cells grown under low- (LL) and high-light (HL) intensity at room temperature. Reversible LL–HL dependent conformations of Chl c, characteristic of two conformations of the porphyrin macrocycle, and the presence of five- and six-coordinated Chl a/c with weak axial ligands are observed in the Raman data. Under HL the energy transfer from Chl c to Chl a is reduced and that from the red-shifted Fxs is minimal. Therefore, Chl c and the blue-shifted Fxs are the only contributors to the energy transfer pathways under HL and the blue- to red-shifted Fxs energy transfer pathway characteristic of the LL is inactive. The results indicate that T. pseudonana can redirect its function from light harvesting to energy-quenching state, and reversibly to light-harvesting upon subsequent illumination to LL by reproducing the red-shifted Fxs and decrease the number of Dds. The LL to HL reversible transitions are accompanied by structural modifications of Chl a/c and the lack of the red-shifted Fxs. A reversible light-intensity behavior of Dds and Fxs composition in the cells of T. pseudonana. The observed LL to HL reversible transitions are accompanied by structural modifications of Chls a/c and the lack of the red-shifted Fxs.![]()
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Affiliation(s)
- Charalampos Tselios
- Cyprus University of Technology, Department of Chemical Engineering, Lemesos, Cyprus
| | - Constantinos Varotsis
- Cyprus University of Technology, Department of Chemical Engineering, Lemesos, Cyprus
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10
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Chrysafoudi A, Maity S, Kleinekathöfer U, Daskalakis V. Robust Strategy for Photoprotection in the Light-Harvesting Antenna of Diatoms: A Molecular Dynamics Study. J Phys Chem Lett 2021; 12:9626-9633. [PMID: 34585934 DOI: 10.1021/acs.jpclett.1c02498] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Diatoms generate a large portion of the oxygen produced on earth due to their exceptional light-harvesting properties involving fucoxanthin and chlorophyll-binding proteins (FCP). At the same time, an efficient adaptation of these complexes to fluctuating light conditions is necessary to protect the diatoms against photodamage. So far, structural and dynamic data for the interaction between FCP and the photoprotective LHCX family of proteins in diatoms are lacking. In this computational study, we provide a structural basis for a remarkable pH-dependent adaptation at the molecular level. Upon binding of the LHCX1 protein to the FCP complex together with a change in pH, conformational changes within the FCP protein result in a variation of the electronic coupling in a specific chlorophyll-fucoxanthin pair, leading to a change in the exciton transfer rate by almost an order of magnitude. A common strategy for photoprotection between diatoms and higher plants is identified and discussed.
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Affiliation(s)
- Anthi Chrysafoudi
- Department of Biology, University of Crete, Voutes University Campus, GR-70013 Heraklion, Crete, Greece
| | - Sayan Maity
- Department of Physics and Earth Sciences, Jacobs University Bremen, Campus Ring 1, 28759 Bremen, Germany
| | - Ulrich Kleinekathöfer
- Department of Physics and Earth Sciences, Jacobs University Bremen, Campus Ring 1, 28759 Bremen, Germany
| | - Vangelis Daskalakis
- Department of Chemical Engineering, Cyprus University of Technology, 30 Archbishop Kyprianou Str., 3603 Limassol, Cyprus
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11
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Zhao Y, Sørensen ER, Lindkvist TT, Kjaer C, Brøndsted Nielsen M, Chen L, Brøndsted Nielsen S. Triangular Rhodamine Triads and Their Intrinsic Photophysics Revealed from Gas-Phase Ion Fluorescence Experiments. Chemistry 2021; 27:10875-10882. [PMID: 34060662 DOI: 10.1002/chem.202101322] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2021] [Indexed: 11/10/2022]
Abstract
When ionic dyes are close together, the internal Coulomb interaction may affect their photophysics and the energy-transfer efficiency. To explore this, we have prepared triangular architectures of three rhodamines connected to a central triethynylbenzene unit (1,3,5-tris(buta-1,3-diyn-1-yl)benzene) based on acetylenic coupling reactions and measured fluorescence spectra of the isolated, triply charged ions in vacuo. We find from comparisons with previously reported monomer and dimer spectra that while polarization of the π-system causes redshifted emission, the separation between the rhodamines is too large for a Stark shift. This picture is supported by electrostatic calculations on model systems composed of three linear and polarizable ionic dyes in D3h configuration: The electric field that each dye experiences from the other two is too small to induce a dipole moment, both in the ground and the excited state. In the case of heterotrimers that contain either two rhodamine 575 (R575) and one R640 or one R575 and two R640, emission is almost purely from R640 although the polarization of the π-system expectedly diminishes the dipole-dipole interaction.
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Affiliation(s)
- Ying Zhao
- State Key Laboratory and Institute of Elemento-Organic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | | | | | - Christina Kjaer
- Department of Physics and Astronomy, Aarhus University, Aarhus, Denmark
| | | | - Li Chen
- State Key Laboratory and Institute of Elemento-Organic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
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12
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Aksu H, Maiti B, Ptaszek M, Dunietz BD. Photoinduced charge transfer in Zn(II) and Au(III)-ligated symmetric and asymmetric bacteriochlorin dyads: A computational study. J Chem Phys 2021; 153:134111. [PMID: 33032416 DOI: 10.1063/5.0023609] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
The excited-state properties and photoinduced charge-transfer (CT) kinetics in a series of symmetrical and asymmetrical Zn- and Au-ligated meso-meso-connected bacteriochlorin (BChl) complexes are studied computationally. BChl derivatives, which are excellent near-IR absorbing chromophores, are found to play a central role in bacterial photosynthetic reaction centers but are rarely used in artificial solar energy harvesting systems. The optical properties of chemically linked BChl complexes can be tuned by varying the linking group and involving different ligated metal ions. We investigate charge transfer in BChl dyads that are either directly linked or through a phenylene ring (1,4-phenylene) and which are ligating Zn or Au ions. The directly linked dyads with a nearly perpendicular arrangement of the BChl units bear markedly different properties than phenylene linked dyads. In addition, we find that the dielectric dependence of the intramolecular CT rate is very strong in neutral Zn-ligated dyads, whereas cationic Au-ligated dyads show negligible dielectric dependence of the CT rate. Rate constants of the photo induced CT process are calculated at the semiclassical Marcus level and are compared to fully quantum mechanical Fermi's golden rule based values. The rates are calculated using a screened range separated hybrid functional that offers a consistent framework for addressing environment polarization. We study solvated systems in two solvents of a low and a high scalar dielectric constant.
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Affiliation(s)
- Huseyin Aksu
- Department of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242-0001, USA
| | - Buddhadev Maiti
- Department of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242-0001, USA
| | - Marcin Ptaszek
- Department of Chemistry and Biochemistry, University of Maryland, Baltimore, Maryland 21250-1000, USA
| | - Barry D Dunietz
- Department of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242-0001, USA
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Lepetit B, Büchel C. Comment on “Acidic pH-Induced Modification of Energy Transfer in Diatom Fucoxanthin Chlorophyll a/ c-Binding Proteins”. J Phys Chem B 2020; 124:10585-10587. [DOI: 10.1021/acs.jpcb.0c06717] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bernard Lepetit
- Plant Ecophysiology, Universität Konstanz, 78457 Konstanz, Germany
| | - Claudia Büchel
- Institute of Molecular Biosciences, Goethe University Frankfurt, 60438 Frankfurt, Germany
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14
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Saccon F, Durchan M, Polívka T, Ruban AV. The robustness of the terminal emitter site in major LHCII complexes controls xanthophyll function during photoprotection. Photochem Photobiol Sci 2020; 19:1308-1318. [PMID: 32815966 DOI: 10.1039/d0pp00174k] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Xanthophylls in light harvesting complexes perform a number of functions ranging from structural support to light-harvesting and photoprotection. In the major light harvesting complex of photosystem II in plants (LHCII), the innermost xanthophyll binding pockets are occupied by lutein molecules. The conservation of these sites within the LHC protein family suggests their importance in LHCII functionality. In the present work, we induced the photoprotective switch in LHCII isolated from the Arabidopsis mutant npq1lut2, where the lutein molecules are exchanged with violaxanthin. Despite the differences in the energetics of the pigments and the impairment of chlorophyll fluorescence quenching in vivo, we show that isolated complexes containing violaxanthin are still able to induce the quenching switch to a similar extent to wild type LHCII monomers. Moreover, the same spectroscopic changes take place, which suggest the involvement of the terminal emitter site (L1) in energy dissipation in both complexes. These results indicate the robust nature of the L1 xanthophyll binding domain in LHCII, where protein structural cues are the major determinant of the function of the bound carotenoid.
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Affiliation(s)
- Francesco Saccon
- Queen Mary University of London, School of Biological and Chemical Sciences, Mile End Road E1 4NS, London, UK.
| | - Milan Durchan
- University of South Bohemia, Institute of Physics, Faculty of Science, České Budějovice, Czech Republic
| | - Tomáš Polívka
- University of South Bohemia, Institute of Physics, Faculty of Science, České Budějovice, Czech Republic
| | - Alexander V Ruban
- Queen Mary University of London, School of Biological and Chemical Sciences, Mile End Road E1 4NS, London, UK.
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15
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16
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Pi X, Zhao S, Wang W, Liu D, Xu C, Han G, Kuang T, Sui SF, Shen JR. The pigment-protein network of a diatom photosystem II-light-harvesting antenna supercomplex. Science 2020; 365:365/6452/eaax4406. [PMID: 31371578 DOI: 10.1126/science.aax4406] [Citation(s) in RCA: 113] [Impact Index Per Article: 28.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2019] [Accepted: 06/18/2019] [Indexed: 01/05/2023]
Abstract
Diatoms play important roles in global primary productivity and biogeochemical cycling of carbon, in part owing to the ability of their photosynthetic apparatus to adapt to rapidly changing light intensity. We report a cryo-electron microscopy structure of the photosystem II (PSII)-fucoxanthin (Fx) chlorophyll (Chl) a/c binding protein (FCPII) supercomplex from the centric diatom Chaetoceros gracilis The supercomplex comprises two protomers, each with two tetrameric and three monomeric FCPIIs around a PSII core that contains five extrinsic oxygen-evolving proteins at the lumenal surface. The structure reveals the arrangement of a huge pigment network that contributes to efficient light energy harvesting, transfer, and dissipation processes in the diatoms.
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Affiliation(s)
- Xiong Pi
- State Key Laboratory of Membrane Biology, Beijing Advanced Innovation Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Songhao Zhao
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.,University of Chinese Academy of Sciences, Yuquan Road, Shijingshan District, Beijing 100049, China
| | - Wenda Wang
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Desheng Liu
- State Key Laboratory of Membrane Biology, Beijing Advanced Innovation Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Caizhe Xu
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.,University of Chinese Academy of Sciences, Yuquan Road, Shijingshan District, Beijing 100049, China
| | - Guangye Han
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Tingyun Kuang
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
| | - Sen-Fang Sui
- State Key Laboratory of Membrane Biology, Beijing Advanced Innovation Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China.
| | - Jian-Ren Shen
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China. .,Research Institute for Interdisciplinary Science, Graduate School of Natural Science and Technology, Okayama University, Okayama 700-8530, Japan
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17
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Kyeyune F, Botha JL, van Heerden B, Malý P, van Grondelle R, Diale M, Krüger TPJ. Strong plasmonic fluorescence enhancement of individual plant light-harvesting complexes. NANOSCALE 2019; 11:15139-15146. [PMID: 31372623 DOI: 10.1039/c9nr04558a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Plasmonic coupling of metallic nanoparticles and adjacent pigments can dramatically increase the brightness of the pigments due to the enhanced local electric field. Here, we demonstrate that the fluorescence brightness of a single plant light-harvesting complex (LHCII) can be significantly enhanced when coupled to a gold nanorod (AuNR). The AuNRs utilized in this study were prepared via chemical reactions, and the hybrid system was constructed using a simple and economical spin-assisted layer-by-layer technique. Enhancement of fluorescence brightness of up to 240-fold was observed, accompanied by a 109-fold decrease in the average (amplitude-weighted) fluorescence lifetime from approximately 3.5 ns down to 32 ps, corresponding to an excitation enhancement of 63-fold and emission enhancement of up to 3.8-fold. This large enhancement is due to the strong spectral overlap of the longitudinal localized surface plasmon resonance of the utilized AuNRs and the absorption or emission bands of LHCII. This study provides an inexpensive strategy to explore the fluorescence dynamics of weakly emitting photosynthetic light-harvesting complexes at the single molecule level.
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Affiliation(s)
- Farooq Kyeyune
- Department of Physics, University of Pretoria, Hatfield, 0028 Pretoria, South Africa.
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18
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Affiliation(s)
- Claudia Büchel
- Institute of Molecular Biosciences, Goethe University Frankfurt, 60438 Frankfurt, Germany.
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Büchel C. Light harvesting complexes in chlorophyll c-containing algae. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2019; 1861:148027. [PMID: 31153887 DOI: 10.1016/j.bbabio.2019.05.003] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Revised: 05/22/2019] [Accepted: 05/24/2019] [Indexed: 12/30/2022]
Abstract
Besides the so-called 'green lineage' of eukaryotic photosynthetic organisms that include vascular plants, a huge variety of different algal groups exist that also harvest light by means of membrane intrinsic light harvesting proteins (Lhc). The main taxa of these algae are the Cryptophytes, Haptophytes, Dinophytes, Chromeridae and the Heterokonts, the latter including diatoms, brown algae, Xanthophyceae and Eustigmatophyceae amongst others. Despite the similarity in Lhc proteins between vascular plants and these algae, pigmentation is significantly different since no Chl b is bound, but often replaced by Chl c, and a large diversity in carotenoids functioning in light harvesting and/or photoprotection is present. Due to the presence of Chl c in most of the taxa the name 'Chl c-containing organisms' has become common, however, Chl b-less is more precise since some harbour Lhc proteins that only bind one type of Chl, Chl a. In recent years huge progress has been made about the occurrence and function of Lhc in diatoms, so-called fucoxanthin chlorophyll proteins (FCP), where also the first molecular structure became available recently. In addition, especially energy transfer amongst the unusual pigments bound was intensively studied in many of these groups. This review summarises the present knowledge about the molecular structure, the arrangement of the different Lhc in complexes, the excitation energy transfer abilities and the involvement in photoprotection of the different Lhc systems in the so-called Chl c-containing organisms. This article is part of a Special Issue entitled Light harvesting, edited by Dr. Roberta Croce.
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Affiliation(s)
- Claudia Büchel
- Institute of Molecular Biosciences, Goethe University Frankfurt, Max-von-Laue Straße 9, 60438 Frankfurt, Germany.
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21
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The role of far-red spectral states in the energy regulation of phycobilisomes. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2019; 1860:341-349. [DOI: 10.1016/j.bbabio.2019.01.007] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2018] [Revised: 12/18/2018] [Accepted: 01/26/2019] [Indexed: 11/19/2022]
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22
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Unique photosynthetic electron transport tuning and excitation distribution in heterokont algae. PLoS One 2019; 14:e0209920. [PMID: 30625205 PMCID: PMC6326504 DOI: 10.1371/journal.pone.0209920] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2018] [Accepted: 12/13/2018] [Indexed: 01/01/2023] Open
Abstract
Heterokont algae are significant contributors to marine primary productivity. These algae have a photosynthetic machinery that shares many common features with that of Viridiplantae (green algae and land plants). Here we demonstrate, however, that the photosynthetic machinery of heterokont algae responds to light fundamentally differently than that of Viridiplantae. While exposure to high light leads to electron accumulation within the photosynthetic electron transport chain in Viridiplantae, this is not the case in heterokont algae. We use this insight to manipulate the photosynthetic electron transport chain and demonstrate that heterokont algae can dynamically distribute excitation energy between the two types of photosystems. We suggest that the reported electron transport and excitation distribution features are adaptations to the marine light environment.
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Pavel M, Rienk VG. Interplay of disorder and delocalization in photosynthetic light harvesting. Curr Opin Chem Biol 2018; 47:1-6. [PMID: 29957484 DOI: 10.1016/j.cbpa.2018.06.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2018] [Accepted: 06/04/2018] [Indexed: 10/28/2022]
Abstract
Photosystems, the machines of photosynthesis, are highly complex and energetically disordered pigment-protein structures. Yet, they perform their function, be it highly efficient energy transfer and charge separation or the ability to switch between light-harvesting and photoprotective states, extremely well. In this opinioned review we describe the interplay of disorder and exciton delocalization in photosynthetic light harvesting. By discussing recent research advances on grounds of well-established concepts, we demonstrate that not only is the excitation delocalization a robust phenomenon, but that it in fact enables the light-harvesting function in the disordered environment.
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Affiliation(s)
- Malý Pavel
- Faculty of Science, Vrije Universiteit Amsterdam, Netherlands; Faculty of Mathematics and Physics, Charles University, Prague, Czechia
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24
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Staleva-Musto H, Kuznetsova V, West RG, Keşan G, Minofar B, Fuciman M, Bína D, Litvín R, Polívka T. Nonconjugated Acyloxy Group Deactivates the Intramolecular Charge-Transfer State in the Carotenoid Fucoxanthin. J Phys Chem B 2018; 122:2922-2930. [PMID: 29469573 DOI: 10.1021/acs.jpcb.8b00743] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
We used ultrafast transient absorption spectroscopy to study excited-state dynamics of the keto-carotenoid fucoxanthin (Fx) and its two derivatives: 19'-butanoyloxyfucoxanthin (bFx) and 19'-hexanoyloxyfucoxanthin (hFx). These derivatives occur in some light-harvesting systems of photosynthetic microorganisms, and their presence is typically related to stress conditions. Even though the hexanoyl (butanoyl) moiety is not a part of the conjugated system of hFx (bFx), their absorption spectra in polar solvents exhibit more pronounced vibrational bands of the S2 state than for Fx. The effect of the nonconjugated acyloxy moiety is further observed in transient absorption spectra, which for Fx exhibit characteristic features of an intramolecular charge transfer (ICT) state in all polar solvents. For bFx and hFx, however, much weaker ICT features are detected in methanol, and the spectral markers of the ICT state disappear completely in polar, but aprotic acetonitrile. The presence of the acyloxy moiety also alters the lifetimes of the S1/ICT state. For Fx, the lifetimes are 60, 30, and 20 ps in n-hexane, acetonitrile, and methanol, whereas for bFx and hFx, these lifetimes yield 60, 60, and 40 ps, respectively. Testing the S1/ICT state lifetimes of hFx in other solvents revealed that some ICT features can be induced only in polar, protic solvents (methanol, ethanol, and ethylene glycol). Thus, bFx and hFx represent a rather rare example of a system in which a nonconjugated functional group significantly alters excited-state dynamics. By comparison with other carotenoids, we show that a keto group at the acyloxy tail, even though it is not in conjugation, affects the electron distribution along the conjugated backbone, resulting in the observed decrease of the ICT character of the S1/ICT state of bFx and hFx.
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Affiliation(s)
- Hristina Staleva-Musto
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic
| | - Valentyna Kuznetsova
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic
| | - Robert G West
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic
| | - Gürkan Keşan
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic.,Department of Chemistry, Faculty of Science , Gebze Technical University , 41400 Gebze , Kocaeli , Turkey
| | - Babak Minofar
- Center for Nanobiology and Structural Biology, Institute of Microbiology , Czech Academy of Sciences , CZ 373 33 Nové Hrady , Czech Republic
| | - Marcel Fuciman
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic
| | - David Bína
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic.,Institute of Plant Molecular Biology, Biological Centre , Czech Academy of Sciences , CZ 370 05 České Budějovice , Czech Republic
| | - Radek Litvín
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic.,Institute of Plant Molecular Biology, Biological Centre , Czech Academy of Sciences , CZ 370 05 České Budějovice , Czech Republic
| | - Tomáš Polívka
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic.,Institute of Plant Molecular Biology, Biological Centre , Czech Academy of Sciences , CZ 370 05 České Budějovice , Czech Republic
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