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For: Hasegawa J, Shimahara H, Mizutani M, Uchiyama S, Arai H, Ishii M, Kobayashi Y, Ferguson SJ, Sambongi Y, Igarashi Y. Stabilization of Pseudomonas aeruginosa cytochrome c(551) by systematic amino acid substitutions based on the structure of thermophilic Hydrogenobacter thermophilus cytochrome c(552). J Biol Chem 1999;274:37533-7. [PMID: 10608805 DOI: 10.1074/jbc.274.53.37533] [Citation(s) in RCA: 62] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
Number Cited by Other Article(s)
1
Heterologous expression and biochemical comparison of two homologous SoxX proteins of endosymbiontic Candidatus Vesicomyosocius okutanii and free-living Hydrogenovibrio crunogenus from deep-sea vent environments. Protein Expr Purif 2022;200:106157. [PMID: 35987324 DOI: 10.1016/j.pep.2022.106157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Revised: 08/11/2022] [Accepted: 08/12/2022] [Indexed: 11/21/2022]
2
Louis BBV, Abriata LA. Reviewing Challenges of Predicting Protein Melting Temperature Change Upon Mutation Through the Full Analysis of a Highly Detailed Dataset with High-Resolution Structures. Mol Biotechnol 2021;63:863-884. [PMID: 34101125 PMCID: PMC8443528 DOI: 10.1007/s12033-021-00349-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Accepted: 06/01/2021] [Indexed: 11/26/2022]
3
Sakaguchi R, Fujiyoshi S, Wakai S, Yamanaka M, Sambongi Y. Thermal destabilization mechanism of cytochrome c' from psychrophilic Shewanella violacea. Biosci Biotechnol Biochem 2021;85:1121-1127. [PMID: 33686411 DOI: 10.1093/bbb/zbab007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Accepted: 01/06/2021] [Indexed: 02/01/2023]
4
Yang H, Yamanaka M, Nagao S, Yasuhara K, Shibata N, Higuchi Y, Hirota S. Protein surface charge effect on 3D domain swapping in cells for c-type cytochromes. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2019;1867:140265. [PMID: 31437585 DOI: 10.1016/j.bbapap.2019.140265] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2019] [Revised: 07/19/2019] [Accepted: 08/14/2019] [Indexed: 12/13/2022]
5
Fujii S, Masanari-Fujii M, Kobayashi S, Kato C, Nishiyama M, Harada Y, Wakai S, Sambongi Y. Commonly stabilized cytochromes c from deep-sea Shewanella and Pseudomonas. Biosci Biotechnol Biochem 2018;82:1-8. [PMID: 29540113 DOI: 10.1080/09168451.2018.1448255] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Accepted: 02/23/2018] [Indexed: 10/17/2022]
6
Yamane-Koshizawa D, Fujii S, Maruno T, Kobayashi Y, Yamanaka M, Wakai S, Sambongi Y. Stabilization of mesophilic Allochromatium vinosum cytochrome c′ through specific mutations modeled by a thermophilic homologue. Biosci Biotechnol Biochem 2018;82:304-311. [DOI: 10.1080/09168451.2017.1419856] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
7
Kobayashi S, Fujii S, Koga A, Wakai S, Matubayasi N, Sambongi Y. Pseudomonas aeruginosa cytochrome c551 denaturation by five systematic urea derivatives that differ in the alkyl chain length. Biosci Biotechnol Biochem 2017;81:1274-1278. [DOI: 10.1080/09168451.2017.1303361] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
8
Fujii S, Oki H, Kawahara K, Yamane D, Yamanaka M, Maruno T, Kobayashi Y, Masanari M, Wakai S, Nishihara H, Ohkubo T, Sambongi Y. Structural and functional insights into thermally stable cytochrome c' from a thermophile. Protein Sci 2017;26:737-748. [PMID: 28097774 PMCID: PMC5368077 DOI: 10.1002/pro.3120] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2016] [Revised: 01/06/2017] [Accepted: 01/09/2017] [Indexed: 11/10/2022]
9
Hayashi Y, Yamanaka M, Nagao S, Komori H, Higuchi Y, Hirota S. Domain swapping oligomerization of thermostable c-type cytochrome in E. coli cells. Sci Rep 2016;6:19334. [PMID: 26838805 PMCID: PMC4738263 DOI: 10.1038/srep19334] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2015] [Accepted: 12/07/2015] [Indexed: 01/21/2023]  Open
10
Tozawa K, Ferguson SJ, Redfield C, Smith LJ. Comparison of the backbone dynamics of wild-type Hydrogenobacter thermophilus cytochrome c(552) and its b-type variant. JOURNAL OF BIOMOLECULAR NMR 2015;62:221-231. [PMID: 25953310 PMCID: PMC4451467 DOI: 10.1007/s10858-015-9938-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/29/2015] [Accepted: 04/27/2015] [Indexed: 06/04/2023]
11
Nagao S, Ueda M, Osuka H, Komori H, Kamikubo H, Kataoka M, Higuchi Y, Hirota S. Domain-swapped dimer of Pseudomonas aeruginosa cytochrome c551: structural insights into domain swapping of cytochrome c family proteins. PLoS One 2015;10:e0123653. [PMID: 25853415 PMCID: PMC4390240 DOI: 10.1371/journal.pone.0123653] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2015] [Accepted: 02/23/2015] [Indexed: 02/06/2023]  Open
12
Stabilization Mechanism of Cytochromec552from a Moderately Thermophilic Bacterium,Hydrogenophilus thermoluteolus. Biosci Biotechnol Biochem 2014;72:2103-9. [DOI: 10.1271/bbb.80187] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
13
Effects of Cysteine Introduction into Three Homologous Cytochromesc. Biosci Biotechnol Biochem 2014;73:1227-9. [DOI: 10.1271/bbb.90028] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
14
Santini S, Bizzarri AR, Yamada T, Beattie CW, Cannistraro S. Binding of azurin to cytochromec551 as investigated by surface plasmon resonance and fluorescence. J Mol Recognit 2014;27:124-30. [DOI: 10.1002/jmr.2346] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2013] [Accepted: 12/02/2013] [Indexed: 11/07/2022]
15
Tai H, Tonegawa K, Shibata T, Hemmi H, Kobayashi N, Yamamoto Y. Inversion of the stereochemistry around the sulfur atom of the axial methionine side chain through alteration of amino acid side chain packing in Hydrogenobacter thermophilus cytochrome C552 and its functional consequences. Biochemistry 2013;52:4800-9. [PMID: 23796250 DOI: 10.1021/bi4004028] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
16
Singh RK, Tiwari MK, Singh R, Lee JK. From protein engineering to immobilization: promising strategies for the upgrade of industrial enzymes. Int J Mol Sci 2013;14:1232-77. [PMID: 23306150 PMCID: PMC3565319 DOI: 10.3390/ijms14011232] [Citation(s) in RCA: 268] [Impact Index Per Article: 24.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2012] [Revised: 11/14/2012] [Accepted: 12/24/2012] [Indexed: 11/16/2022]  Open
17
Hayashi Y, Nagao S, Osuka H, Komori H, Higuchi Y, Hirota S. Domain Swapping of the Heme and N-Terminal α-Helix in Hydrogenobacter thermophilus Cytochrome c552 Dimer. Biochemistry 2012;51:8608-16. [DOI: 10.1021/bi3011303] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
18
Fine tuning of the redox function of Pseudomonas aeruginosa cytochrome c551 through structural properties of a polypeptide loop bearing an axial Met residue. J Inorg Biochem 2012;108:182-7. [DOI: 10.1016/j.jinorgbio.2011.11.027] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2011] [Revised: 11/19/2011] [Accepted: 11/28/2011] [Indexed: 11/17/2022]
19
Lucas MF, Guallar V. An atomistic view on human hemoglobin carbon monoxide migration processes. Biophys J 2012;102:887-96. [PMID: 22385860 DOI: 10.1016/j.bpj.2012.01.011] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2011] [Revised: 01/02/2012] [Accepted: 01/11/2012] [Indexed: 10/28/2022]  Open
20
Tai H, Irie K, Mikami SI, Yamamoto Y. Enhancement of the thermostability of Hydrogenobacter thermophilus cytochrome c(552) through introduction of an extra methylene group into its hydrophobic protein interior. Biochemistry 2011;50:3161-9. [PMID: 21417336 DOI: 10.1021/bi200256d] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
21
Yamanaka M, Masanari M, Sambongi Y. Conferment of Folding Ability to a Naturally Unfolded Apocytochrome c through Introduction of Hydrophobic Amino Acid Residues. Biochemistry 2011;50:2313-20. [DOI: 10.1021/bi101646m] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
22
Wazawa T, Miyazaki T, Sambongi Y, Suzuki M. Hydration analysis of Pseudomonas aeruginosa cytochrome c551 upon acid unfolding by dielectric relaxation spectroscopy. Biophys Chem 2010;151:160-9. [DOI: 10.1016/j.bpc.2010.06.008] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2010] [Revised: 06/21/2010] [Accepted: 06/22/2010] [Indexed: 10/19/2022]
23
Tai H, Mikami SI, Irie K, Watanabe N, Shinohara N, Yamamoto Y. Role of a Highly Conserved Electrostatic Interaction on the Surface of Cytochrome c in Control of the Redox Function. Biochemistry 2009;49:42-8. [DOI: 10.1021/bi901484b] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
24
Mikami SI, Tai H, Yamamoto Y. Effect of the Redox-Dependent Ionization State of the Heme Propionic Acid Side Chain on the Entropic Contribution to the Redox Potential of Pseudomonas aeruginosa Cytochrome c551. Biochemistry 2009;48:8062-9. [DOI: 10.1021/bi9008962] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
25
Electron transfer from cytochrome c to cupredoxins. J Biol Inorg Chem 2009;14:821-8. [DOI: 10.1007/s00775-009-0494-8] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2008] [Accepted: 02/28/2009] [Indexed: 10/21/2022]
26
Tai H, Munegumi T, Yamamoto Y. Stability of the heme Fe-N-terminal amino group coordination bond in denatured cytochrome c. Inorg Chem 2009;48:331-8. [PMID: 19053349 DOI: 10.1021/ic801202d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
27
Sonoyama T, Hasegawa J, Uchiyama S, Nakamura S, Kobayashi Y, Sambongi Y. Stability enhancement of cytochrome c through heme deprotonation and mutations. Biophys Chem 2009;139:37-41. [DOI: 10.1016/j.bpc.2008.09.020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2008] [Accepted: 09/30/2008] [Indexed: 10/21/2022]
28
Using a strategy based on the concept of convergent evolution to identify residue substitutions responsible for thermal adaptation. Proteins 2008;73:53-62. [DOI: 10.1002/prot.22049] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
29
Fernandes AP, Couto I, Morgado L, Londer YY, Salgueiro CA. Isotopic labeling of c-type multiheme cytochromes overexpressed in E. coli. Protein Expr Purif 2008;59:182-8. [PMID: 18343156 DOI: 10.1016/j.pep.2008.02.001] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2008] [Revised: 02/06/2008] [Accepted: 02/07/2008] [Indexed: 11/30/2022]
30
Ogawa K, Sonoyama T, Takeda T, Ichiki SI, Nakamura S, Kobayashi Y, Uchiyama S, Nakasone K, Takayama SIJ, Mita H, Yamamoto Y, Sambongi Y. Roles of a short connecting disulfide bond in the stability and function of psychrophilic Shewanella violacea cytochrome c (5). Extremophiles 2007;11:797-807. [PMID: 17657404 DOI: 10.1007/s00792-007-0099-5] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2007] [Accepted: 06/15/2007] [Indexed: 10/23/2022]
31
LeMaster DM, Hernández G. Residue cluster additivity of thermodynamic stability in the hydrophobic core of mesophile vs. hyperthermophile rubredoxins. Biophys Chem 2007;125:483-9. [PMID: 17118523 DOI: 10.1016/j.bpc.2006.10.013] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2006] [Revised: 10/27/2006] [Accepted: 10/27/2006] [Indexed: 11/23/2022]
32
LeMaster DM, Hernández G. Additivity of Differential Conformational Dynamics in Hyperthermophile/Mesophile Rubredoxin Chimeras as Monitored by Hydrogen Exchange. Chembiochem 2006;7:1886-9. [PMID: 17068837 DOI: 10.1002/cbic.200600276] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
33
Goihberg E, Dym O, Tel-Or S, Levin I, Peretz M, Burstein Y. A single proline substitution is critical for the thermostabilization of Clostridium beijerinckii alcohol dehydrogenase. Proteins 2006;66:196-204. [PMID: 17063493 DOI: 10.1002/prot.21170] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
34
Chan CH, Liang HK, Hsiao NW, Ko MT, Lyu PC, Hwang JK. Relationship between local structural entropy and protein thermostability. Proteins 2006;57:684-91. [PMID: 15532068 DOI: 10.1002/prot.20263] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
35
Borgia A, Bonivento D, Travaglini-Allocatelli C, Di Matteo A, Brunori M. Unveiling a hidden folding intermediate in c-type cytochromes by protein engineering. J Biol Chem 2006;281:9331-6. [PMID: 16452476 DOI: 10.1074/jbc.m512127200] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
36
Kojima N, Yamanaka M, Ichiki SI, Sambongi Y. Unexpected elevated production of Aquifex aeolicus cytochrome c555 in Escherichia coli cells lacking disulfide oxidoreductases. Biosci Biotechnol Biochem 2005;69:1418-21. [PMID: 16041151 DOI: 10.1271/bbb.69.1418] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
37
Tai H, Nagatomo S, Mita H, Sambongi Y, Yamamoto Y. Characterization of Non-Native Heme Coordination Structures Emerging upon Guanidine Hydrochloric Acid-Induced Unfolding ofPseudomonas aeruginosaFerricytochromec551. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2005. [DOI: 10.1246/bcsj.78.2019] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
38
Jiménez HR, Pardal C, Moratal JM. 1H NMR studies of paramagnetic ferricytochrome c-551 from Pseudomonas aeruginosa at high pH: The role of histidine 16 in the spin transition. Polyhedron 2005. [DOI: 10.1016/j.poly.2005.06.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
39
LeMaster DM, Hernández G. Additivity in Both Thermodynamic Stability and Thermal Transition Temperature for Rubredoxin Chimeras via Hybrid Native Partitioning. Structure 2005;13:1153-63. [PMID: 16084387 DOI: 10.1016/j.str.2005.05.007] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2005] [Revised: 04/17/2005] [Accepted: 05/06/2005] [Indexed: 11/23/2022]
40
Ichiki SI, Nakamura S, Ohkubo T, Kobayashi Y, Hasegawa J, Uchiyama S, Nishihara H, Mizuta K, Sambongi Y. Cloning, expression, crystallization and preliminary X-ray characterization of cytochrome c552 from a moderate thermophilic bacterium, Hydrogenophilus thermoluteolus. Acta Crystallogr Sect F Struct Biol Cryst Commun 2005;61:395-8. [PMID: 16511051 PMCID: PMC1952422 DOI: 10.1107/s1744309105007761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2005] [Accepted: 03/11/2005] [Indexed: 11/11/2022]
41
Liang HK, Huang CM, Ko MT, Hwang JK. Amino acid coupling patterns in thermophilic proteins. Proteins 2005;59:58-63. [PMID: 15688447 DOI: 10.1002/prot.20386] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
42
Oikawa K, Nakamura S, Sonoyama T, Ohshima A, Kobayashi Y, Takayama SIJ, Yamamoto Y, Uchiyama S, Hasegawa J, Sambongi Y. Five amino acid residues responsible for the high stability of Hydrogenobacter thermophilus cytochrome c552: reciprocal mutation analysis. J Biol Chem 2004;280:5527-32. [PMID: 15598654 DOI: 10.1074/jbc.m412392200] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
43
Eijsink VGH, Bjørk A, Gåseidnes S, Sirevåg R, Synstad B, van den Burg B, Vriend G. Rational engineering of enzyme stability. J Biotechnol 2004;113:105-20. [PMID: 15380651 DOI: 10.1016/j.jbiotec.2004.03.026] [Citation(s) in RCA: 326] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2003] [Revised: 02/16/2004] [Accepted: 03/04/2004] [Indexed: 11/19/2022]
44
Campos LA, Garcia-Mira MM, Godoy-Ruiz R, Sanchez-Ruiz JM, Sancho J. Do Proteins Always Benefit from a Stability Increase? Relevant and Residual Stabilisation in a Three-state Protein by Charge Optimisation. J Mol Biol 2004;344:223-37. [PMID: 15504413 DOI: 10.1016/j.jmb.2004.09.047] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2004] [Revised: 08/31/2004] [Accepted: 09/20/2004] [Indexed: 11/28/2022]
45
Bjørk A, Dalhus B, Mantzilas D, Sirevåg R, Eijsink VGH. Large improvement in the thermal stability of a tetrameric malate dehydrogenase by single point mutations at the dimer-dimer interface. J Mol Biol 2004;341:1215-26. [PMID: 15321717 DOI: 10.1016/j.jmb.2004.06.079] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2004] [Revised: 06/06/2004] [Accepted: 06/22/2004] [Indexed: 10/26/2022]
46
Tachiiri N, Hemmi H, Takayama SIJ, Mita H, Hasegawa J, Sambongi Y, Yamamoto Y. Effects of axial methionine coordination on the in-plane asymmetry of the heme electronic structure of cytochrome c. J Biol Inorg Chem 2004;9:733-42. [PMID: 15235942 DOI: 10.1007/s00775-004-0569-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2004] [Accepted: 06/01/2004] [Indexed: 10/26/2022]
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Hiraoka Y, Yamada T, Goto M, Das Gupta TK, Chakrabarty AM. Modulation of mammalian cell growth and death by prokaryotic and eukaryotic cytochrome c. Proc Natl Acad Sci U S A 2004;101:6427-32. [PMID: 15082831 PMCID: PMC404061 DOI: 10.1073/pnas.0401631101] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
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Goto M, Yamada T, Kimbara K, Horner J, Newcomb M, Gupta TKD, Chakrabarty AM. Induction of apoptosis in macrophages by Pseudomonas aeruginosa azurin: tumour-suppressor protein p53 and reactive oxygen species, but not redox activity, as critical elements in cytotoxicity. Mol Microbiol 2003;47:549-59. [PMID: 12519204 DOI: 10.1046/j.1365-2958.2003.03317.x] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Yamada T, Goto M, Punj V, Zaborina O, Kimbara K, Das Gupta TK, Chakrabarty AM. The bacterial redox protein azurin induces apoptosis in J774 macrophages through complex formation and stabilization of the tumor suppressor protein p53. Infect Immun 2002;70:7054-62. [PMID: 12438386 PMCID: PMC133031 DOI: 10.1128/iai.70.12.7054-7062.2002] [Citation(s) in RCA: 60] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
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Sambongi Y, Uchiyama S, Kobayashi Y, Igarashi Y, Hasegawa J. Cytochrome c from a thermophilic bacterium has provided insights into the mechanisms of protein maturation, folding, and stability. EUROPEAN JOURNAL OF BIOCHEMISTRY 2002;269:3355-61. [PMID: 12135473 DOI: 10.1046/j.1432-1033.2002.03045.x] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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