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He L, Chen IW, Zhang Z, Zheng W, Sayadi A, Wang L, Sang W, Ji R, Lei J, Arnqvist G, Lei C, Zhu-Salzman K. In silico promoter analysis and functional validation identify CmZFH, the co-regulator of hypoxia-responsive genes CmScylla and CmLPCAT. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY 2022; 140:103681. [PMID: 34800642 DOI: 10.1016/j.ibmb.2021.103681] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Revised: 09/30/2021] [Accepted: 11/06/2021] [Indexed: 06/13/2023]
Abstract
Oxygen (O2) plays an essential role in aerobic organisms including terrestrial insects. Under hypoxic stress, the cowpea bruchid (Callosobruchus maculatus) ceases feeding and growth. However, larvae, particularly 4th instar larvae exhibit very high tolerance to hypoxia and can recover normal growth once brought to normoxia. To better understand the molecular mechanism that enables insects to cope with low O2 stress, we performed RNA-seq to distinguish hypoxia-responsive genes in midguts and subsequently identified potential common cis-elements in promoters of hypoxia-induced and -repressed genes, respectively. Selected elements were subjected to gel-shift and transient transfection assays to confirm their cis-regulatory function. Of these putative common cis-elements, AREB6 appeared to regulate the expression of CmLPCAT and CmScylla, two hypoxia-induced genes. CmZFH, the putative AREB6-binding protein, was hypoxia-inducible. Transient expression of CmZFH in Drosophila S2 cells activated CmLPCAT and CmScylla, and their induction was likely through interaction of CmZFH with AREB6. Binding to AREB6 was further confirmed by bacterially expressed CmZFH recombinant protein. Deletion analyses indicated that the N-terminal zinc-finger cluster of CmZFH was the key AREB6-binding domain. Through in silico and experimental exploration, we discovered novel transcriptional regulatory components associated with gene expression dynamics under hypoxia that facilitated insect survival.
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Affiliation(s)
- Li He
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China; Department of Entomology, Texas A&M University, College Station, TX, 77843, USA; Institute for Plant Genomics & Biotechnology, Texas A&M University, College Station, TX, 77843, USA
| | - Ivy W Chen
- Department of Entomology, Texas A&M University, College Station, TX, 77843, USA; Institute for Plant Genomics & Biotechnology, Texas A&M University, College Station, TX, 77843, USA
| | - Zan Zhang
- Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Academy of Agricultural Sciences, Southwest University, Chongqing, 400716, China
| | - Wenping Zheng
- Key Laboratory of Horticultural Plant Biology (MOE), Institute of Urban and Horticultural Entomology, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China
| | - Ahmed Sayadi
- Animal Ecology, Department of Ecology and Genetics, Uppsala University, Uppsala, 75236, Sweden
| | - Lei Wang
- Department of Entomology, Texas A&M University, College Station, TX, 77843, USA; Institute for Plant Genomics & Biotechnology, Texas A&M University, College Station, TX, 77843, USA
| | - Wen Sang
- Department of Entomology, Texas A&M University, College Station, TX, 77843, USA; Institute for Plant Genomics & Biotechnology, Texas A&M University, College Station, TX, 77843, USA
| | - Rui Ji
- Department of Entomology, Texas A&M University, College Station, TX, 77843, USA; Institute for Plant Genomics & Biotechnology, Texas A&M University, College Station, TX, 77843, USA
| | - Jiaxin Lei
- Department of Entomology, Texas A&M University, College Station, TX, 77843, USA; Institute for Plant Genomics & Biotechnology, Texas A&M University, College Station, TX, 77843, USA
| | - Göran Arnqvist
- Animal Ecology, Department of Ecology and Genetics, Uppsala University, Uppsala, 75236, Sweden
| | - Chaoliang Lei
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China
| | - Keyan Zhu-Salzman
- Department of Entomology, Texas A&M University, College Station, TX, 77843, USA; Institute for Plant Genomics & Biotechnology, Texas A&M University, College Station, TX, 77843, USA.
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Sainsbury F, Rhéaume AJ, Goulet MC, Vorster J, Michaud D. Discrimination of Differentially Inhibited Cysteine Proteases by Activity-Based Profiling Using Cystatin Variants with Tailored Specificities. J Proteome Res 2012; 11:5983-93. [DOI: 10.1021/pr300699n] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | | | | | - Juan Vorster
- Department of Plant Production
and Soil Science, University of Pretoria, Pretoria, South Africa
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Chi YH, Ahn JE, Yun DJ, Lee SY, Liu TX, Zhu-Salzman K. Changes in oxygen and carbon dioxide environment alter gene expression of cowpea bruchids. JOURNAL OF INSECT PHYSIOLOGY 2011; 57:220-230. [PMID: 21078326 DOI: 10.1016/j.jinsphys.2010.11.011] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2010] [Revised: 11/05/2010] [Accepted: 11/08/2010] [Indexed: 05/30/2023]
Abstract
Hermetic storage is a widely adopted technique for preventing stored grain from being damaged by storage insect pests. In the air-tight container, insects consume oxygen through metabolism while concomitantly raising carbon dioxide concentrations through respiration. Previous studies on the impact of hypoxia and hypercapnia on feeding behavior of cowpea bruchids have shown that feeding activity gradually decreases in proportion to the changing gas concentrations and virtually ceases at approximately 3-6% (v/v) oxygen and 15-18% carbon dioxide. Further, a number of bruchid larvae are able to recover their feeding activity after days of low oxygen and high carbon dioxide, although extended exposure tends to reduce survival. In the current study, to gain insight into the molecular mechanism underpinning the hypoxia-coping response, we profiled transcriptomic responses to hypoxia/hypercapnia (3% oxygen, 17% carbon dioxide for 4 and 24h) using cDNA microarrays, followed by quantitative RT-PCR verification of selected gene expression changes. A total of 1046 hypoxia-responsive cDNAs were sequenced; these clustered into 765 contigs, of which 645 were singletons. Many (392) did not show homology with known genes, or had homology only with genes of unknown function in a BLAST search. The identified differentially-regulated sequences encoded proteins presumptively involved in nutrient transport and metabolism, cellular signaling and structure, development, and stress responses. Gene expression profiles suggested that insects compensate for lack of oxygen by coordinately reducing energy demand, shifting to anaerobic metabolism, and strengthening cellular structure and muscular contraction.
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Affiliation(s)
- Yong Hun Chi
- Department of Entomology, Texas A&M University, College Station, TX 77843, USA
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