1
|
Lee JM, Park MH, Park BS, Oh MK. Production of S-methyl-methionine using engineered Saccharomyces cerevisiae sake K6. J Ind Microbiol Biotechnol 2023; 50:kuad026. [PMID: 37653437 PMCID: PMC10495038 DOI: 10.1093/jimb/kuad026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Accepted: 08/29/2023] [Indexed: 09/02/2023]
Abstract
S-methyl-methionine (SMM), also known as vitamin U, is an important food supplement produced by various plants. In this study, we attempted to produce it in an engineered microorganism, Saccharomyces cerevisiae, by introducing an MMT gene encoding a methionine S-methyltransferase from Arabidopsis thaliana. The S. cerevisiae sake K6 strain, which is a Generally Recognized as Safe (GRAS) strain, was chosen as the host because it produces a significant amount of S-adenosylmethionine (SAM), a precursor of SMM. To increase SMM production in the host, MHT1 and SAM4 genes encoding homocysteine S-methyltransferase were knocked out to prevent SMM degradation. Additionally, MMP1, which encodes S-methyl-methionine permease, was deleted to prevent SMM from being imported into the cell. Finally, ACS2 gene encoding acetyl-CoA synthase was overexpressed, and MLS1 gene encoding malate synthase was deleted to increase SAM availability. Using the engineered strain, 1.92 g/L of SMM was produced by fed-batch fermentation. ONE-SENTENCE SUMMARY Introducing a plant-derived MMT gene encoding methionine S-methyltransferase into engineered Saccharomyces cerevisiae sake K6 allowed microbial production of S-methyl-methionine (SMM).
Collapse
Affiliation(s)
- Jun-Min Lee
- Department of Chemical & Biological Engineering, Korea University, Seoul 136-763, Korea
| | - Min-Ho Park
- Department of Chemical & Biological Engineering, Korea University, Seoul 136-763, Korea
| | - Bu-Soo Park
- Department of Chemical & Biological Engineering, Korea University, Seoul 136-763, Korea
- Samyang Corp. 295 Pangyo-ro, Bundang-gu, Seongnam-si, Gyeonggi-do 13488, Republic of Korea
| | - Min-Kyu Oh
- Department of Chemical & Biological Engineering, Korea University, Seoul 136-763, Korea
| |
Collapse
|
2
|
Whitcomb SJ, Rakpenthai A, Brückner F, Fischer A, Parmar S, Erban A, Kopka J, Hawkesford MJ, Hoefgen R. Cysteine and Methionine Biosynthetic Enzymes Have Distinct Effects on Seed Nutritional Quality and on Molecular Phenotypes Associated With Accumulation of a Methionine-Rich Seed Storage Protein in Rice. FRONTIERS IN PLANT SCIENCE 2020; 11:1118. [PMID: 32793268 PMCID: PMC7387578 DOI: 10.3389/fpls.2020.01118] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 07/07/2020] [Indexed: 06/11/2023]
Abstract
Staple crops in human and livestock diets suffer from deficiencies in certain "essential" amino acids including methionine. With the goal of increasing methionine in rice seed, we generated a pair of "Push × Pull" double transgenic lines, each containing a methionine-dense seed storage protein (2S albumin from sunflower, HaSSA) and an exogenous enzyme for either methionine (feedback desensitized cystathionine gamma synthase from Arabidopsis, AtD-CGS) or cysteine (serine acetyltransferase from E. coli, EcSAT) biosynthesis. In both double transgenic lines, the total seed methionine content was approximately 50% higher than in their untransformed parental line, Oryza sativa ssp. japonica cv. Taipei 309. HaSSA-containing rice seeds were reported to display an altered seed protein profile, speculatively due to insufficient sulfur amino acid content. However, here we present data suggesting that this may result from an overloaded protein folding machinery in the endoplasmic reticulum rather than primarily from redistribution of limited methionine from endogenous seed proteins to HaSSA. We hypothesize that HaSSA-associated endoplasmic reticulum stress results in redox perturbations that negatively impact sulfate reduction to cysteine, and we speculate that this is mitigated by EcSAT-associated increased sulfur import into the seed, which facilitates additional synthesis of cysteine and glutathione. The data presented here reveal challenges associated with increasing the methionine content in rice seed, including what may be relatively low protein folding capacity in the endoplasmic reticulum and an insufficient pool of sulfate available for additional cysteine and methionine synthesis. We propose that future approaches to further improve the methionine content in rice should focus on increasing seed sulfur loading and avoiding the accumulation of unfolded proteins in the endoplasmic reticulum. Oryza sativa ssp. japonica: urn:lsid:ipni.org:names:60471378-2.
Collapse
Affiliation(s)
- Sarah J. Whitcomb
- Laboratory of Amino Acid and Sulfur Metabolism, Department of Molecular Physiology, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany
| | - Apidet Rakpenthai
- Laboratory of Amino Acid and Sulfur Metabolism, Department of Molecular Physiology, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany
| | - Franziska Brückner
- Laboratory of Amino Acid and Sulfur Metabolism, Department of Molecular Physiology, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany
| | - Axel Fischer
- Bioinformatics Infrastructure Group, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany
| | - Saroj Parmar
- Plant Sciences Department, Rothamsted Research, Harpenden, United Kingdom
| | - Alexander Erban
- Applied Metabolome Analysis Infrastructure Group, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany
| | - Joachim Kopka
- Applied Metabolome Analysis Infrastructure Group, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany
| | | | - Rainer Hoefgen
- Laboratory of Amino Acid and Sulfur Metabolism, Department of Molecular Physiology, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany
| |
Collapse
|
3
|
Saint-Macary ME, Barbisan C, Gagey MJ, Frelin O, Beffa R, Lebrun MH, Droux M. Methionine biosynthesis is essential for infection in the rice blast fungus Magnaporthe oryzae. PLoS One 2015; 10:e0111108. [PMID: 25856162 PMCID: PMC4391826 DOI: 10.1371/journal.pone.0111108] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2013] [Accepted: 09/29/2014] [Indexed: 02/02/2023] Open
Abstract
Methionine is a sulfur amino acid standing at the crossroads of several biosynthetic pathways. In fungi, the last step of methionine biosynthesis is catalyzed by a cobalamine-independent methionine synthase (Met6, EC 2.1.1.14). In the present work, we studied the role of Met6 in the infection process of the rice blast fungus, Magnaporthe oryzae. To this end MET6 null mutants were obtained by targeted gene replacement. On minimum medium, MET6 null mutants were auxotrophic for methionine. Even when grown in presence of excess methionine, these mutants displayed developmental defects, such as reduced mycelium pigmentation, aerial hypha formation and sporulation. They also displayed characteristic metabolic signatures such as increased levels of cysteine, cystathionine, homocysteine, S-adenosylmethionine, S-adenosylhomocysteine while methionine and glutathione levels remained unchanged. These metabolic perturbations were associated with the over-expression of MgCBS1 involved in the reversed transsulfuration pathway that metabolizes homocysteine into cysteine and MgSAM1 and MgSAHH1 involved in the methyl cycle. This suggests a physiological adaptation of M. oryzae to metabolic defects induced by the loss of Met6, in particular an increase in homocysteine levels. Pathogenicity assays showed that MET6 null mutants were non-pathogenic on both barley and rice leaves. These mutants were defective in appressorium-mediated penetration and invasive infectious growth. These pathogenicity defects were rescued by addition of exogenous methionine and S-methylmethionine. These results show that M. oryzae cannot assimilate sufficient methionine from plant tissues and must synthesize this amino acid de novo to fulfill its sulfur amino acid requirement during infection.
Collapse
Affiliation(s)
| | - Crystel Barbisan
- Biochemistry Department, Bayer CropScience, F-69263, Lyon, France
| | - Marie Josèphe Gagey
- UMR 5240 MAP, UMR 5240 CNRS-UCB-INSA-BCS, Bayer CropScience, F-69263, Lyon, France
| | - Océane Frelin
- UMR 5240 MAP, UMR 5240 CNRS-UCB-INSA-BCS, Bayer CropScience, F-69263, Lyon, France
| | - Roland Beffa
- Biochemistry Department, Bayer CropScience, F-69263, Lyon, France
| | - Marc Henri Lebrun
- UMR 5240 MAP, UMR 5240 CNRS-UCB-INSA-BCS, Bayer CropScience, F-69263, Lyon, France
- * E-mail:
| | - Michel Droux
- UMR 5240 MAP, UMR 5240 CNRS-UCB-INSA-BCS, Bayer CropScience, F-69263, Lyon, France
| |
Collapse
|
4
|
Barding GA, Béni S, Fukao T, Bailey-Serres J, Larive CK. Comparison of GC-MS and NMR for metabolite profiling of rice subjected to submergence stress. J Proteome Res 2012. [PMID: 23205590 DOI: 10.1021/pr300953k] [Citation(s) in RCA: 89] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Natural disasters such as drought, extreme temperatures, and flooding can severely impact crop production. Understanding the metabolic response of crops threatened with these disasters provides insights into biological response mechanisms that can influence survival. In this study, a comparative analysis of GC-MS and (1)H NMR results was conducted for wild-type and tolerant rice varieties stressed by up to 3 days of submergence and allowed 1 day of postsubmergence recovery. Most metabolomics studies are conducted using a single analytical platform. Each platform, however, has inherent advantages and disadvantages that can influence the analytical coverage of the metabolome. In this work, a more thorough analysis of the plant stress response was possible through the use of both (1)H NMR and GC-MS. Several metabolites, such as S-methyl methionine and the dipeptide alanylglycine, were only detected and quantified by (1)H NMR. The high dynamic range of NMR, as compared with that of the GC-TOF-MS used in this study, provided broad coverage of the metabolome in a single experiment. The sensitivity of GC-MS facilitated the quantitation of sugars, organic acids, and amino acids, some of which were not detected by NMR, and provided additional insights into the regulation of the TCA cycle. The combined metabolic information provided by (1)H NMR and GC-MS was essential for understanding the complex biochemical and molecular response of rice plants to submergence.
Collapse
Affiliation(s)
- Gregory A Barding
- Department of Chemistry, University of California-Riverside, Riverside, California 92521, USA
| | | | | | | | | |
Collapse
|
5
|
Barding GA, Fukao T, Béni S, Bailey-Serres J, Larive CK. Differential Metabolic Regulation Governed by the Rice SUB1A Gene during Submergence Stress and Identification of Alanylglycine by 1H NMR Spectroscopy. J Proteome Res 2011; 11:320-30. [DOI: 10.1021/pr200919b] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Gregory A. Barding
- Department of Chemistry, University of California −Riverside, California, United States
- Center for Plant Cell Biology, University of California −Riverside, California, United States
| | - Takeshi Fukao
- Center for Plant Cell Biology, University of California −Riverside, California, United States
- Department of Botany and Plant Sciences, University of California −Riverside, California, United States
| | - Szabolcs Béni
- Department of Chemistry, University of California −Riverside, California, United States
- Department of Pharmaceutical Chemistry, Semmelweis University, Budapest, Hungary
| | - Julia Bailey-Serres
- Center for Plant Cell Biology, University of California −Riverside, California, United States
- Department of Botany and Plant Sciences, University of California −Riverside, California, United States
| | - Cynthia K. Larive
- Department of Chemistry, University of California −Riverside, California, United States
- Center for Plant Cell Biology, University of California −Riverside, California, United States
| |
Collapse
|
6
|
Loscos N, Ségurel M, Dagan L, Sommerer N, Marlin T, Baumes R. Identification of S-methylmethionine in Petit Manseng grapes as dimethyl sulphide precursor in wine. Anal Chim Acta 2007; 621:24-9. [PMID: 18573366 DOI: 10.1016/j.aca.2007.11.033] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2007] [Revised: 11/05/2007] [Accepted: 11/09/2007] [Indexed: 11/19/2022]
Abstract
A procedure for the extraction of free amino acids was applied to isolate S-methylmethionine (SMM) from late harvest Petit Manseng grapes. Grapes were destemmed and crushed, and the obtained clarified must was percolated through cation-exchange resins (Dowex 50 WX4-100). The retained compounds were eluted with ammonia solution and the extract was finally concentrated. Taking into account the potential DMS (PDMS using heat-alkaline treatment assay) of the initial grape juice used (51.5nmolmL(-1)) and the concentration factor of the extract (17.9-fold), the PDMS of the final extract (678nmolmL(-1)) gave an overall recovery of 73.5% for juice SMM. This compound was identified and quantified (484.5nmolmL(-1) relatively to [(2)H(3)]-SMM used as internal standard) by its selective detection in this extract without derivatization by MALDI-TOF-MS using instrumentation and procedures previously reported to analyze SMM in complex natural extracts. SMM and 22 other amino acids in the initial must and in the final SMM extract were also determined using a Biochrom 30 amino acid analyser with post-column ninhydrin derivatization. SMM peak identification and quantification (401.2nmolmL(-1) relatively to norleucine used as internal standard) were carried out by comparison with commercial SMM.
Collapse
Affiliation(s)
- N Loscos
- Dpto. De Química Analítica Facultad de Ciencias Universidad de Zaragoza, C/Pedro Cerbuna no. 12, 50009 Zaragoza, Spain
| | | | | | | | | | | |
Collapse
|