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Xiao W, Yan S, Liu X, Sun S, Ui Haq Khan Z, Wu W, Sun J. Theoretical study on the degradation mechanism, kinetics and toxicity for aqueous ozonation reaction of furan derivatives. CHEMOSPHERE 2023; 332:138782. [PMID: 37142106 DOI: 10.1016/j.chemosphere.2023.138782] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 03/29/2023] [Accepted: 04/24/2023] [Indexed: 05/06/2023]
Abstract
The compounds including Furan-2,5-dicarboxylic acid (FDCA), 2-methyl-3-furoic acid (MFA), and 2-furoic acid (FA), containing Furan rings are considered to be possessing high ozone reactivity, although in depth studies of their ozonation processes have not been carried out yet. Hence, mechanism, kinetics and toxicity by quantum chemical, and their structure activity relationship are being investigated in this study. Studies of reaction mechanisms revealed that during the ozonolysis of three furan derivatives containing C=C double bond, furan ring opening occurs. At temperature (298 K) and pressure of 1 atm the degradations rates of 2.22 × 103 M-1 s-1 (FDCA), 5.81 × 106 M-1 s-1 (MFA) and 1.22 × 105 M-1 s-1 (FA) suggested that the reactivity order is: MFA > FA > FDCA. In the presence of water, oxygen and ozone, the primary product of ozonation, the Criegee intermediates (CIs) would produce lower molecule weight of aldehydes and carboxylic acids by undergoing degradation pathways. The aquatic toxicity reveals that three furan derivatives play green chemicals roles. Significantly, most of degradation products are least harmful to organisms residing the hydrosphere. The mutagenicity and developmental toxicity of FDCA is minimum as compared to FA and MFA, which shows the applicability of FDCA in a wider and broader field. Results of this study revealed its importance in the industrial sector and degradation experiments.
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Affiliation(s)
- Weikang Xiao
- Hubei Key Laboratory of Pollutant Analysis & Reuse Technology, College of Chemistry and Chemical Engineering, Hubei Normal University, Cihu Road 11, Huangshi, Hubei, 435002, PR China
| | - Suding Yan
- College of Urban and Environmental Sciences, Hubei Normal University, Huangshi, 435002, PR China
| | - Xiufan Liu
- Hubei Key Laboratory of Pollutant Analysis & Reuse Technology, College of Chemistry and Chemical Engineering, Hubei Normal University, Cihu Road 11, Huangshi, Hubei, 435002, PR China
| | - Simei Sun
- Huangshi Key Laboratory of Photoelectric Technology and Materials, College of Physics and Electronic Science, Hubei Normal University, Huangshi, 435002, PR China
| | - Zia Ui Haq Khan
- Department of Environmental Sciences, COMSATS University Islamabad, Vehari Campus, 61100, Pakistan
| | - Wenzhong Wu
- College of Foreign Languages, Hubei Normal University, Cihu Road 11, Huangshi, Hubei, 435002, PR China
| | - Jingyu Sun
- Hubei Key Laboratory of Pollutant Analysis & Reuse Technology, College of Chemistry and Chemical Engineering, Hubei Normal University, Cihu Road 11, Huangshi, Hubei, 435002, PR China.
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Conformational fidelity and hydrogen bond associability of L-histidine with sulfamate anion studied through XRD, quantum chemical, spectroscopic and molecular docking simulation as a cdk-4 inhibitor against retinoblastoma. J Mol Struct 2023. [DOI: 10.1016/j.molstruc.2022.134402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Impact of a single water molecule on the atmospheric oxidation of thiophene by hydroperoxyl radical. Sci Rep 2022; 12:18959. [PMID: 36347924 PMCID: PMC9643398 DOI: 10.1038/s41598-022-22831-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Accepted: 10/19/2022] [Indexed: 11/11/2022] Open
Abstract
Water as an important assistant can alter the reactivity of atmospheric species. This project is designed to investigate the impact of a single water molecule on the atmospheric reactions of aromatic compounds that have not been attended to comprehensively. In the first part, the atmospheric oxidation mechanisms of thiophene initiated by hydroperoxyl radical through a multiwell-multichannel potential energy surface were studied to have useful information about the chemistry of the considered reaction. It was verified that for the thiophene plus HO2 reaction, the addition mechanism is dominant the same as other aromatic compounds. Due to the importance of the subject and the presence of water molecules in the atmosphere with a high concentration that we know as relative humidity, and also the lack of insight into the influence of water on the reactions of aromatic compounds with active atmospheric species, herein, the effect of a single water molecule on the addition pathways of the title reaction is evaluated. In another word, this research explores how water can change the occurrence of reactions of aromatic compounds in the atmosphere. For this, the presence of one water molecule is simulated by higher-level calculations (BD(T) method) through the main interactions with the stationary points of the most probable pathways. The results show that the mechanism of the reaction with water is more complicated than the bare reaction due to the formation of the ring-like structures. Also, water molecule decreases the relative energies of all addition pathways. Moreover, atoms in molecule theory (AIM) along with the kinetic study by the transition state (TST) and the Rice–Ramsperger–Kassel–Marcus (RRKM) theories demonstrate that the overall interactions of a path determine how the rate of that path changes. In this regard, our results establish that the interactions of water with HO2 (thiophene) in the initial complex 1WHA (1WTA or 1WTB) are stronger (weaker) than the sum of its interactions in transition states. Also, for the water-assisted pathways, the ratio of the partition function of the transition state to the partition functions of the reactants is similar to the respective bare reaction. Therefore, the reaction rates of the bare pathways are more than the water-assisted paths that include the 1WHA complex and are less than the paths that involve the 1WTA and 1WTB complexes.
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Xiao W, Sun S, Yan S, Wu W, Sun J. Theoretical study on the formation of Criegee intermediates from ozonolysis of pentenal: An example of trans-2-pentenal. CHEMOSPHERE 2022; 303:135142. [PMID: 35636604 DOI: 10.1016/j.chemosphere.2022.135142] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Revised: 05/17/2022] [Accepted: 05/25/2022] [Indexed: 06/15/2023]
Abstract
In this study, we investigated the reaction mechanism and kinetics of ozone with trans-2-pentenal using density functional theory (DFT) and conventional transition state theory (CTST). At 298 K and 1 atm, the gas-phase reaction mechanisms and kinetic parameters were calculated at the level of CCSD(T)/6-311+G(d,p)//M06-2X/6-311+G(d,p). Both CC and CO bond cycloaddition as well as hydrogen abstraction were found. The calculations indicated that the main reaction path is 1,3-dipole cycloaddition reactions of ozone with CC bond with the relatively lower syn-energy-barrier of 3.35 kcal mol-1 to form primary ozonide which decomposed to produce a carbonyl oxide called a Criegee intermediate (CI) and an aldehyde. The subsequent reactions of CIs were analysed in detail. It is found that the reaction pathways of the novelty CIs containing an aldehyde group are extremely similar with general CIs when they react with NO, NO2, SO2, H2O, CH2O and O2. The condensed Fukui function were calculated to identify the active site of the chosen molecules. At 298 K and 1 atm, the reaction rate coefficient was 9.13 × 10-18 cm3 molecule-1 s-1 with atmospheric lifetime of 1.3 days. The calculated rate constant is in general agreement with the available experimental data. The branching ratios indicated that syn-addition pathways are prior to anti-addition. The atmospheric ratios for CIs formation and the bimolecular reaction rate constants for the Criegee intermediates with the variety of partners were calculated. Our theoretical results are of importance in atmospheric chemistry of unsaturated aldehyde oxidation by ozone.
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Affiliation(s)
- Weikang Xiao
- Hubei Key Laboratory of Pollutant Analysis & Reuse Technology, College of Chemistry and Chemical Engineering, Hubei Normal University, Cihu Road 11, Huangshi, Hubei, 435002, PR China
| | - Simei Sun
- Huangshi Key Laboratory of Photoelectric Technology and Materials, College of Physics and Electronic Science, Hubei Normal University, Huangshi, 435002, PR China
| | - Suding Yan
- College of Urban and Environmental Sciences, Hubei Normal University, Huangshi, 435002, PR China
| | - Wenzhong Wu
- College of Foreign Languages, Hubei Normal University, Cihu Road 11, Huangshi, Hubei, 435002, PR China
| | - Jingyu Sun
- Hubei Key Laboratory of Pollutant Analysis & Reuse Technology, College of Chemistry and Chemical Engineering, Hubei Normal University, Cihu Road 11, Huangshi, Hubei, 435002, PR China.
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Tamilvanan V, Subramani M, Subramani D, Ramasamy S. Probing of sequential atmospheric degradation of chlorine radical initiated 1,8-cineole in the presence of O 2 and NO radical with the emission of secondary pollution. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 300:118974. [PMID: 35150796 DOI: 10.1016/j.envpol.2022.118974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Revised: 01/24/2022] [Accepted: 02/07/2022] [Indexed: 06/14/2023]
Abstract
1,8-cineole is an essential monoterpene cyclic ether which is released into the troposphere by many types of plants. It interacts with several atmospheric oxidants because of which is removed from the troposphere via oxidation. The oxidation of 1,8-cineole with Cl radical and the subsequent addition of atmospheric O2 and NO radical with the intermediates are studied using the quantum chemical method. Further, the thermodynamic parameters of 1,8-cineole, such as enthalpy and Gibbs free energy are calculated for all initial and subsequent reactions to facilitate perspicacity. The dissociation and formation of chemical bonds during H abstraction from 1,8-cineole at C2, C6, and C8 sites are described using Mayer bond order analysis. The reaction force analysis demonstrates that the structural rearrangement is dominant with the yield percentages of 85%, 50.80%, and 96.9% over electron reordering with the yield percentages of 15%, 49.19%, and 3.03% respectively in the H abstraction reaction of 1,8-cineole. In the temperature range of 278-350 K, the total CVT/SCT rate constant is calculated to be 2.94 × 10-12 cm3/molecule/sec, which is consistent with the experimentally available value of 2.2 × 10-10 cm3/molecule/sec. At 298 K, branching ratios of rate constant of alkyl radical intermediates I1A, I1B, and I1C are calculated with the percentage of 42.19%, 21.52%, and 36.29% respectively, which suggest that the Cl addition to the C2 site contributes more to the total rate constant rather than the other two sites (C6 and C8). The lifetime of 1,8-cineole is calculated to be 5.2 weeks, implies that the 1,8-cineole may be readily destroyed in the atmosphere after it is released. Secondary pollutants formed from this degradation mechanism may be harmful to the environment and the living things.
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Affiliation(s)
- Vasuki Tamilvanan
- Department of Physics, Bharathiar University, Coimbatore, 641046, Tamil Nadu, India
| | | | | | - Shankar Ramasamy
- Department of Physics, Bharathiar University, Coimbatore, 641046, Tamil Nadu, India.
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Subramani M, Saravanan V, Theerthagiri J, Subramaniam V, Pazhanivel T, Ramasamy S, Manickam S. Kinetics and degradation of camphene with OH radicals and its subsequent fate under the atmospheric O 2 and NO radicals - A theoretical study. CHEMOSPHERE 2021; 267:129250. [PMID: 33338722 DOI: 10.1016/j.chemosphere.2020.129250] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Revised: 11/28/2020] [Accepted: 12/06/2020] [Indexed: 06/12/2023]
Abstract
Camphene (C10H16) is an abundant bicyclic monoterpene in the atmosphere which can be easily oxidized by the atmospheric OH radicals. In this study, the oxidation of camphene with OH radicals and its subsequent reactions are studied using quantum chemical method. Thermochemical parameters show that the addition of OH radicals to the terminal C10 atom of camphene is thermodynamically more stable than the addition of OH radicals to the internal C7 atom of camphene. The reaction force profile demonstrates that the formation of two hydroxyalkoxy radical intermediates (I1a and I2a) are mainly dominated by the structural rearrangement with 94.28% and 99.43% of the total energy, respectively. The overall reaction rate coefficient for camphene + OH radical is 2.1⨯10-12 cm3 molecule-1 sec-1 at 298 K and 1 atm which agree well with the experimental reaction rate coefficient (5.58⨯10-11 cm3 molecule-1 sec-1) for the reaction of camphene with OH radical. The branching ratio for the addition of OH radical to the C10 position of camphene is 68.32%, and the C7 position of camphene is 31.68% at 298 K. The calculated lifetime reveals that camphene degrades quickly in the atmosphere owing to its short lifetime of 5.3 h. The obtained mechanistic and kinetic results reveal that the addition of OH radical to the C10 position is more dominant than the C7 position, and it is more stable and spontaneous in the atmosphere.
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Affiliation(s)
| | - Vinnarasi Saravanan
- Department of Physics, Bharathiar University, Coimbatore, Tamil Nadu, 641046, India
| | - Jayaraman Theerthagiri
- Department of Chemistry and Research Institute of Natural Sciences, Gyeongsang National University, Jinju, 52828, South Korea
| | | | - Thangavelu Pazhanivel
- Smart Materials Interface Laboratory, Department of Physics, Periyar University, Salem, Tamilnadu, 636011, India
| | - Shankar Ramasamy
- Department of Physics, Bharathiar University, Coimbatore, Tamil Nadu, 641046, India.
| | - Sivakumar Manickam
- Petroleum and Chemical Engineering, Faculty of Engineering, Universiti Teknologi Brunei, Bandar Seri Begawan, BE1410, Brunei Darussalam
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Srivastava R. Chemical reactivity theory (CRT) study of small drug-like biologically active molecules. J Biomol Struct Dyn 2020; 39:943-952. [DOI: 10.1080/07391102.2020.1725642] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Ruby Srivastava
- Bioinformatics, CSIR-Centre for Cellular and Molecular Biology, Hyderabad, India
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Theoretical investigation on the ozonolysis mechanism of (E)-2-formylcinnamaldehyde in the atmosphere. Chem Phys Lett 2019. [DOI: 10.1016/j.cplett.2019.06.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Experimental and density functional theory (MEP, FMO, NLO, Fukui functions) and antibacterial activity studies on 2-amino-4- (4-nitrophenyl) -5,6-dihydrobenzo [h] quinoline-3-carbonitrile. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.10.001] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Elakiya C, Shankar R, Vijayakumar S, Kolandaivel P. A theoretical study on the reaction mechanism and kinetics of allyl alcohol (CH2 = CHCH2OH) with ozone (O3) in the atmosphere. Mol Phys 2017. [DOI: 10.1080/00268976.2017.1292012] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- C. Elakiya
- Department of Physics, Bharathiar University, Coimbatore, India
| | - R. Shankar
- Department of Physics, Bharathiar University, Coimbatore, India
| | - S. Vijayakumar
- Department of Medical Physics, Bharathiar University, Coimbatore, India
| | - P. Kolandaivel
- Department of Physics, Bharathiar University, Coimbatore, India
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