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Čubiňák M, Edlová T, Polák P, Tobrman T. Indolylboronic Acids: Preparation and Applications. Molecules 2019; 24:E3523. [PMID: 31569441 PMCID: PMC6803883 DOI: 10.3390/molecules24193523] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2019] [Revised: 09/24/2019] [Accepted: 09/25/2019] [Indexed: 11/16/2022] Open
Abstract
Indole derivatives are associated with a variety of both biological activities and applications in the field of material chemistry. A number of different strategies for synthesizing substituted indoles by means of the reactions of indolylboronic acids with electrophilic compounds are considered the methods of choice for modifying indoles because indolylboronic acids are easily available, stable, non-toxic and new reactions using indolylboronic acids have been described in the literature. Thus, the aim of this review is to summarize the methods available for the preparation of indolylboronic acids as well as their chemical transformations. The review covers the period 2010-2019.
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Affiliation(s)
- Marek Čubiňák
- Department of Organic Chemistry, University of Chemistry and Technology Prague, Technická 5, 166 28 Prague 6, Czech Republic.
| | - Tereza Edlová
- Department of Organic Chemistry, University of Chemistry and Technology Prague, Technická 5, 166 28 Prague 6, Czech Republic.
| | - Peter Polák
- Department of Organic Chemistry, University of Chemistry and Technology Prague, Technická 5, 166 28 Prague 6, Czech Republic.
| | - Tomáš Tobrman
- Department of Organic Chemistry, University of Chemistry and Technology Prague, Technická 5, 166 28 Prague 6, Czech Republic.
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Boeszoermenyi A, Chhabra S, Dubey A, Radeva DL, Burdzhiev NT, Chanev CD, Petrov OI, Gelev VM, Zhang M, Anklin C, Kovacs H, Wagner G, Kuprov I, Takeuchi K, Arthanari H. Aromatic 19F- 13C TROSY: a background-free approach to probe biomolecular structure, function, and dynamics. Nat Methods 2019; 16:333-340. [PMID: 30858598 PMCID: PMC6549241 DOI: 10.1038/s41592-019-0334-x] [Citation(s) in RCA: 67] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2018] [Accepted: 01/30/2019] [Indexed: 12/30/2022]
Abstract
Atomic-level information about the structure and dynamics of biomolecules is critical for an understanding of their function. Nuclear magnetic resonance (NMR) spectroscopy provides unique insights into the dynamic nature of biomolecules and their interactions, capturing transient conformers and their features. However, relaxation-induced line broadening and signal overlap make it challenging to apply NMR spectroscopy to large biological systems. Here we took advantage of the high sensitivity and broad chemical shift range of 19F nuclei and leveraged the remarkable relaxation properties of the aromatic 19F-13C spin pair to disperse 19F resonances in a two-dimensional transverse relaxation-optimized spectroscopy spectrum. We demonstrate the application of 19F-13C transverse relaxation-optimized spectroscopy to investigate proteins and nucleic acids. This experiment expands the scope of 19F NMR in the study of the structure, dynamics, and function of large and complex biological systems and provides a powerful background-free NMR probe.
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Affiliation(s)
- Andras Boeszoermenyi
- Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA
- Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA
| | - Sandeep Chhabra
- Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA
- Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA
- Medicinal Chemistry, Monash Institute of Pharmaceutical Sciences, Monash University, Parkville, Victoria, Australia
| | - Abhinav Dubey
- Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA
- Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA
| | - Denitsa L Radeva
- Faculty of Chemistry and Pharmacy, Sofia University, Sofia, Bulgaria
| | | | - Christo D Chanev
- Faculty of Chemistry and Pharmacy, Sofia University, Sofia, Bulgaria
| | - Ognyan I Petrov
- Faculty of Chemistry and Pharmacy, Sofia University, Sofia, Bulgaria
| | - Vladimir M Gelev
- Faculty of Chemistry and Pharmacy, Sofia University, Sofia, Bulgaria
| | - Meng Zhang
- Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA
| | | | | | - Gerhard Wagner
- Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA
| | - Ilya Kuprov
- School of Chemistry, University of Southampton, Highfield, Southampton, UK
| | - Koh Takeuchi
- Molecular Profiling Research Center for Drug Discovery , National Institute of Advanced Industrial Science and Technology, Tokyo, Japan.
| | - Haribabu Arthanari
- Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA.
- Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.
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Yang T, Moreira W, Nyantakyi SA, Chen H, Aziz DB, Go ML, Dick T. Amphiphilic Indole Derivatives as Antimycobacterial Agents: Structure–Activity Relationships and Membrane Targeting Properties. J Med Chem 2017; 60:2745-2763. [DOI: 10.1021/acs.jmedchem.6b01530] [Citation(s) in RCA: 52] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Tianming Yang
- Department
of Pharmacy and ‡Department of Microbiology and Immunology, National University of Singapore, Singapore 117543, Singapore
| | - Wilfried Moreira
- Department
of Pharmacy and ‡Department of Microbiology and Immunology, National University of Singapore, Singapore 117543, Singapore
| | - Samuel Agyei Nyantakyi
- Department
of Pharmacy and ‡Department of Microbiology and Immunology, National University of Singapore, Singapore 117543, Singapore
| | - Huan Chen
- Department
of Pharmacy and ‡Department of Microbiology and Immunology, National University of Singapore, Singapore 117543, Singapore
| | - Dinah binte Aziz
- Department
of Pharmacy and ‡Department of Microbiology and Immunology, National University of Singapore, Singapore 117543, Singapore
| | - Mei-Lin Go
- Department
of Pharmacy and ‡Department of Microbiology and Immunology, National University of Singapore, Singapore 117543, Singapore
| | - Thomas Dick
- Department
of Pharmacy and ‡Department of Microbiology and Immunology, National University of Singapore, Singapore 117543, Singapore
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Schäfer D, Weiß P, Ermert J, Castillo Meleán J, Zarrad F, Neumaier B. Preparation of No-Carrier-Added 6-[18F]Fluoro-l-tryptophan via Cu-Mediated Radiofluorination. European J Org Chem 2016. [DOI: 10.1002/ejoc.201600705] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Dominique Schäfer
- Forschungszentrum Jülich GmbH; Institut für Neurowissenschaften und Medizin; INM-5: Nuklearchemie; 52425 Jülich Germany
| | - Philipp Weiß
- Forschungszentrum Jülich GmbH; Institut für Neurowissenschaften und Medizin; INM-5: Nuklearchemie; 52425 Jülich Germany
| | - Johannes Ermert
- Forschungszentrum Jülich GmbH; Institut für Neurowissenschaften und Medizin; INM-5: Nuklearchemie; 52425 Jülich Germany
| | - Johnny Castillo Meleán
- Forschungszentrum Jülich GmbH; Institut für Neurowissenschaften und Medizin; INM-5: Nuklearchemie; 52425 Jülich Germany
| | - Fadi Zarrad
- Forschungszentrum Jülich GmbH; Institut für Neurowissenschaften und Medizin; INM-5: Nuklearchemie; 52425 Jülich Germany
| | - Bernd Neumaier
- Forschungszentrum Jülich GmbH; Institut für Neurowissenschaften und Medizin; INM-5: Nuklearchemie; 52425 Jülich Germany
- Institute of Radiochemistry and Experimental Molecular Imaging; University Hospital Cologne; Kerpener Str. 62 50937 Cologne Germany
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Weiss PS, Ermert J, Castillo Meleán J, Schäfer D, Coenen HH. Radiosynthesis of 4-[(18)F]fluoro-L-tryptophan by isotopic exchange on carbonyl-activated precursors. Bioorg Med Chem 2015; 23:5856-69. [PMID: 26193761 DOI: 10.1016/j.bmc.2015.06.073] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2015] [Revised: 06/27/2015] [Accepted: 06/29/2015] [Indexed: 12/18/2022]
Abstract
Several (18)F-labeled aromatic amino acids have been developed primarily for tumor imaging with positron-emission-tomography (PET). Also, (18)F-labeled tryptophan derivatives were synthesized by electrophilic (18)F-fluorination or by introducing a [(18)F]fluoroalkyl group. Here, a 3-step method for a nucleophilic radiosynthesis of 4-[(18)F]fluoro-L-tryptophan was developed. A carbonyl activated precursor containing a chiral amino acid building block was radiofluorinated by isotopic exchange, followed by removal of the activating formyl group by reductive decarbonylation and subsequent cleavage of the building block under acidic conditions. The title compound was obtained within 100 min with a radiochemical yield of about 13%, a molar activity of >70 MBq/mmol and an enantiomeric excess of >99%.
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Affiliation(s)
- Philipp S Weiss
- Institut für Neurowissenschaften und Medizin, INM-5: Nuklearchemie, Forschungszentrum Jülich, 52425 Jülich, Germany
| | - Johannes Ermert
- Institut für Neurowissenschaften und Medizin, INM-5: Nuklearchemie, Forschungszentrum Jülich, 52425 Jülich, Germany.
| | - Johnny Castillo Meleán
- Institut für Neurowissenschaften und Medizin, INM-5: Nuklearchemie, Forschungszentrum Jülich, 52425 Jülich, Germany
| | - Dominique Schäfer
- Institut für Neurowissenschaften und Medizin, INM-5: Nuklearchemie, Forschungszentrum Jülich, 52425 Jülich, Germany
| | - Heinz H Coenen
- Institut für Neurowissenschaften und Medizin, INM-5: Nuklearchemie, Forschungszentrum Jülich, 52425 Jülich, Germany
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