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Ondar EE, Polynski MV, Ananikov VP. Predicting 195 Pt NMR Chemical Shifts in Water-Soluble Inorganic/Organometallic Complexes with a Fast and Simple Protocol Combining Semiempirical Modeling and Machine Learning. Chemphyschem 2023:e202200940. [PMID: 36806426 DOI: 10.1002/cphc.202200940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 02/20/2023] [Accepted: 02/20/2023] [Indexed: 02/23/2023]
Abstract
Water-soluble Pt complexes are the key components in medicinal chemistry and catalysis. The well-known cisplatin family of anticancer drugs and industrial hydrosylilation catalysts are two leading examples. On the molecular level, the activity mechanisms of such complexes mostly involve changes in the Pt coordination sphere. Using 195 Pt NMR spectroscopy for operando monitoring would be a valuable tool for uncovering the activity mechanisms; however, reliable approaches for the rapid correlation of Pt complex structure with 195 Pt chemical shifts are very challenging and not available for everyday research practice. While NMR shielding is a response property, molecular 3D structure determines NMR spectra, as widely known, which allows us to build up 3D structure to 195 Pt chemical shift correlations. Accordingly, we present a new workflow for the determination of lowest-energy configurational/conformational isomers based on the GFN2-xTB semiempirical method and prediction of corresponding chemical shifts with a Machine Learning (ML) model tuned for Pt complexes. The workflow was designed for the prediction of 195 Pt chemical shifts of water-soluble Pt(II) and Pt(IV) anionic, neutral, and cationic complexes with halide, NO2 - , (di)amino, and (di)carboxylate ligands with chemical shift values ranging from -6293 to 7090 ppm. The model offered an accuracy (normalized root-mean-square deviation/RMSD) of 1.08 %/145.02 ppm on the held-out test set.
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Affiliation(s)
- Evgeniia E Ondar
- Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, Moscow, 119991, Russia
| | - Mikhail V Polynski
- Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, Moscow, 119991, Russia.,Scientific Technological Center of Organic and Pharmaceutical Chemistry, National Academy of Sciences, 26 Azatutyan Ave, 0014, Yerevan, Armenia
| | - Valentine P Ananikov
- Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, Moscow, 119991, Russia
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Yu Zheng J, Ling Zhou K, Kang Zhao W, Wang Y, He J, Wang X, Wang H, Yan H, Bao Han C. Enhanced the synergistic degradation effect between active hydroxyl and reactive oxygen species for indoor formaldehyde based on platinum atoms modified MnOOH/MnO 2 catalyst. J Colloid Interface Sci 2022; 628:359-370. [PMID: 35998461 DOI: 10.1016/j.jcis.2022.08.079] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2022] [Revised: 08/09/2022] [Accepted: 08/11/2022] [Indexed: 10/15/2022]
Abstract
Maintaining high activity during prolonged catalysis is always the pursuit in catalytic degradation of organic pollutants. For indoor formaldehyde (HCHO) degradation, the accumulation of intermediates is the major factor limiting the conversion of HCHO to final product CO2 (HCHO-to-CO2 conversion) and long-lasting catalysis. Herein, a three-dimensional radialized nanostructure catalyst self-assembled by MnOOH/MnO2 nanosheets anchored with Pt single atoms (PtSA-MnOOH/MnO2 with a trace platinum loading amount of 0.09%) is developed by thermally assisted two-step electrochemical method, which achieves enhanced CO2 production in catalytic HCHO degradation at the room temperature by the collaborative action of active hydroxyl (OH*) and active oxygen species (O2*). By boosting intermediates' decomposing, the catalyst implements real-time HCHO-to-CO2 conversion (∼85.7%) and long-term continuous HCHO removal (∼98%) during 100 h in a 15 ppm HCHO atmosphere at 25 °C under a weight hourly space velocity of 30000 mL/gcat∙h. Density functional theory calculation shows that the formation energy of O2* from O2 over PtSA-MnOOH/MnO2 is nearly half lower than that over Pt-MnO2 catalyst. And decomposing accumulated intermediates gives the credit to OH* species sustainably generated by the combined action of MnOOH and O2*. The synergistic action between PtSA and MnOOH contributes to the continuous production of O2* and OH* for enhancing CO2 production in indoor catalytic formaldehyde degradation.
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Affiliation(s)
- Jia Yu Zheng
- The Key Laboratory of Advanced Functional Materials, Ministry of Education of China, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Kai Ling Zhou
- The Key Laboratory of Advanced Functional Materials, Ministry of Education of China, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Wen Kang Zhao
- The Key Laboratory of Advanced Functional Materials, Ministry of Education of China, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Yueshuai Wang
- The Key Laboratory of Advanced Functional Materials, Ministry of Education of China, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Junda He
- Key Laboratory of Beijing on Regional Air Pollution Control, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Xinxin Wang
- The Key Laboratory of Advanced Functional Materials, Ministry of Education of China, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Hao Wang
- The Key Laboratory of Advanced Functional Materials, Ministry of Education of China, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Hui Yan
- The Key Laboratory of Advanced Functional Materials, Ministry of Education of China, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Chang Bao Han
- The Key Laboratory of Advanced Functional Materials, Ministry of Education of China, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China.
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Chen X, Yuan B, Yu F, Liu Y, Xie C, Yu S. Hydrogenation of α-Pinene over Platinum Nanoparticles Reduced and Stabilized by Sodium Lignosulfonate. ACS OMEGA 2020; 5:8902-8911. [PMID: 32337453 PMCID: PMC7178784 DOI: 10.1021/acsomega.0c00533] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/06/2020] [Accepted: 03/27/2020] [Indexed: 06/11/2023]
Abstract
A one-pot clean preparation procedure and catalytic performance of platinum nanoparticles (NPs) reduced and stabilized by sodium lignosulfonate in aqueous solution are reported. No other chemical reagents are needed during the metal reduction and stabilization step, thanks to the active participation of sodium lignosulfonate (SLS). UV-vis, Fourier transform infrared (FT-IR), X-ray diffraction (XRD), X-ray photoelectron spectroscopy (XPS), transmission electron microscopy (TEM), 1H NMR, 195Pt NMR, and two-dimensional heteronuclear single-quantum coherence (2D HSQC) NMR studies were thoroughly performed to analyze the formation, particle size, and main lattice planes of NPs, the valence-state changes of the metal, and structural changes of SLS. An ecofriendly selective synthesis of cis-pinane from an abundant renewable natural resource, α-pinene, was developed in the presence of the prepared Pt NP aqueous system. Furthermore, this catalyst system was proved to show easy recovery and stable reusability by five-run tests. The synergistic effect of SLS reduction and stabilization not only avoided the introduction of conventional reducing agents and stabilizers but also made full use of the byproducts of the pulp and paper industry. This proved to be an environmentally friendly method for converting the natural resource α-pinene to cis-pinane.
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Affiliation(s)
- Xiangyun Chen
- State
Key Laboratory Base of Eco-Chemical Engineering, College of Chemistry
and Molecular Engineering, Qingdao University
of Science and Technology, Qingdao 266042, China
| | - Bing Yuan
- State
Key Laboratory Base of Eco-Chemical Engineering, College of Chemistry
and Molecular Engineering, Qingdao University
of Science and Technology, Qingdao 266042, China
| | - Fengli Yu
- State
Key Laboratory Base of Eco-Chemical Engineering, College of Chemistry
and Molecular Engineering, Qingdao University
of Science and Technology, Qingdao 266042, China
| | - Yuxiang Liu
- College
of Chemical Engineering, Qingdao University
of Science and Technology, Qingdao 266042, China
| | - Congxia Xie
- State
Key Laboratory Base of Eco-Chemical Engineering, College of Chemistry
and Molecular Engineering, Qingdao University
of Science and Technology, Qingdao 266042, China
| | - Shitao Yu
- College
of Chemical Engineering, Qingdao University
of Science and Technology, Qingdao 266042, China
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Carvalho J, Paschoal D, Fonseca Guerra C, Dos Santos H. Nonrelativistic protocol for calculating the 1J(195Pt-15N) coupling constant in Pt(II)-complexes using all-electron Gaussian basis-set. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137279] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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Zhang C, Huang H, Gu J, Du Z, Li B, Li S, Yang S. Fast Cryomediated Dynamic Equilibrium Hydrolysates towards Grain Boundary-Enriched Platinum Scaffolds for Efficient Methanol Oxidation. RESEARCH 2019; 2019:8174314. [PMID: 31922138 PMCID: PMC6946255 DOI: 10.34133/2019/8174314] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Accepted: 07/24/2019] [Indexed: 11/24/2022]
Abstract
Although platinum nanocrystals have been considered as potential electrocatalysts for methanol oxidation reaction (MOR) in fuel cells, the large-scale practical implementation has been stagnated by their limited abundance, easy poisoning, and low durability. Here, grain boundary-enriched platinum (GB-Pt) scaffolds are produced in large scale via facilely reducing fast cryomediated dynamic equilibrium hydrolysates of platinum salts. Such plentiful platinum grain boundaries are originated from the fast fusion of short platinum nanowires during reduction of the individually and homogeneously dispersed platinum intermediates. These grain boundaries can provide abundant active sites to efficiently catalyze MOR and meanwhile enable to oxidize the adsorbed poisonous CO during the electrocatalytic process. As a consequence, the as-synthesized GB-Pt scaffolds exhibit an impressively high mass activity of 1027.1 mA mgPt−1 for MOR, much higher than that of commercial Pt/C (345.2 mA mgPt−1), as well as good stability up to 5000 cycles. We are confident that this synthetic protocol can be further extended to synthesize various grain boundary-enriched metal scaffolds with broad applications in catalysis.
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Affiliation(s)
- Chao Zhang
- Key Laboratory of Aerospace Advanced Materials and Performance of Ministry of Education, School of Materials Science and Engineering, Beihang University, 100191 Beijing, China
| | - Huajie Huang
- College of Mechanics and Materials, Hohai University, Nanjing 210098, China
| | - Jianan Gu
- Key Laboratory of Aerospace Advanced Materials and Performance of Ministry of Education, School of Materials Science and Engineering, Beihang University, 100191 Beijing, China
| | - Zhiguo Du
- Key Laboratory of Aerospace Advanced Materials and Performance of Ministry of Education, School of Materials Science and Engineering, Beihang University, 100191 Beijing, China
| | - Bin Li
- Key Laboratory of Aerospace Advanced Materials and Performance of Ministry of Education, School of Materials Science and Engineering, Beihang University, 100191 Beijing, China
| | - Songmei Li
- Key Laboratory of Aerospace Advanced Materials and Performance of Ministry of Education, School of Materials Science and Engineering, Beihang University, 100191 Beijing, China
| | - Shubin Yang
- Key Laboratory of Aerospace Advanced Materials and Performance of Ministry of Education, School of Materials Science and Engineering, Beihang University, 100191 Beijing, China
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Vasilchenko DB, Tkachev SV, Tsipis AC. Aquanitrato Complexes of Palladium, Rhodium, and Platinum: A Comparative 15
N NMR and DFT Study. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201701140] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Danila B. Vasilchenko
- Nikolaev Institute of Inorganic Chemistry; Siberian Branch of the Russian Academy of Science; 630090 Novosibirsk Russia
- Novosibirsk State University; 630090 Novosibirsk Russia
| | - Sergey V. Tkachev
- Nikolaev Institute of Inorganic Chemistry; Siberian Branch of the Russian Academy of Science; 630090 Novosibirsk Russia
| | - Athanassios C. Tsipis
- Laboratory of Inorganic and General Chemistry; University of Ioannina; 45110 Ioannina Greece
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Tsipis AC, Karapetsas IN. Prediction of 195 Pt NMR of photoactivable diazido- and azine-Pt(IV) anticancer agents by DFT computational protocols. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2017; 55:145-153. [PMID: 27628024 DOI: 10.1002/mrc.4523] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2016] [Revised: 09/03/2016] [Accepted: 09/05/2016] [Indexed: 06/06/2023]
Abstract
195 Pt NMR chemical shifts for a series of large-sized photoactivable anticancer diazido-Pt(IV), homopiperizine-Pt(IV) and multifunctional azine-Pt(IV) complexes hardly to be probed experimentally and by sophisticated four-component and two-component relativistic calculations are predicted with high accuracy by density functional theory computational protocols. The calculated 195 Pt NMR chemical shifts constitute a crucial descriptor for making highly predictive one-parameter quantitative structure activity relationships models that help in designing photoactivable Pt(IV)-based antitumor agents with high cytotoxicity and selectivity. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Athanassios C Tsipis
- Laboratory of Inorganic and General Chemistry, Department of Chemistry, University of Ioannina, Ioannina, Greece
| | - Ioannis N Karapetsas
- Laboratory of Inorganic and General Chemistry, Department of Chemistry, University of Ioannina, Ioannina, Greece
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8
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Paschoal D, Guerra CF, de Oliveira MAL, Ramalho TC, Dos Santos HF. Predicting Pt-195 NMR chemical shift using new relativistic all-electron basis set. J Comput Chem 2016; 37:2360-73. [DOI: 10.1002/jcc.24461] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2016] [Revised: 05/23/2016] [Accepted: 07/13/2016] [Indexed: 01/26/2023]
Affiliation(s)
- D. Paschoal
- NEQC: Núcleo de Estudos em Química Computacional, Departamento de Química - ICE, Universidade Federal de Juiz de Fora, Campus Universitário, 36.036-900; Juiz de Fora MG Brasil
- NQTCM: Núcleo de Química Teórica e Computacional de Macaé, Polo Ajuda, Universidade Federal do Rio de Janeiro, Campus UFRJ-Macaé, 27.971-525; Macaé RJ Brasil
| | - C. Fonseca Guerra
- Department of Theoretical Chemistry and Amsterdam Center for Multiscale Modeling; Vrije Universiteit Amsterdam; De Boelelaan 1083 Amsterdam HV 1081 the Netherlands
| | - M. A. L. de Oliveira
- GQAQ: Grupo de Química Analítica e Quimiometria, Departamento de Química - ICE, Universidade Federal de Juiz de Fora, Campus Universitário, 36.036-900; Juiz de Fora MG Brasil
| | - T. C. Ramalho
- GQC: Grupo de Química Computacional, Departamento de Química, Universidade Federal de Lavras, 37.200-000; Lavras MG Brasil
| | - H. F. Dos Santos
- NEQC: Núcleo de Estudos em Química Computacional, Departamento de Química - ICE, Universidade Federal de Juiz de Fora, Campus Universitário, 36.036-900; Juiz de Fora MG Brasil
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