Female nesting behaviour affects hatchling survival and sex ratio in the loggerhead sea turtle: implications for conservation programmes

Maternal investment and early thermal conditions affect performance and antipredator responses

Exposure to increased temperatures during early development can lead to phenotypic plasticity in morphology, physiology, and behavior across a range of ectothermic animals. In addition, maternal effects are known to be important contributors to phenotypic variation in offspring. Whether the 2 factors interact to shape offspring morphology and behavior is rarely explored. This is critical because climate change is expected to impact both incubation temperature and maternal stress and resource allocation. Using a fully factorial design, and Bayesian multivariate mixed models, we explored how the manipulation of early thermal environment and yolk-quantity in eggs affected the morphology, performance, and antipredator behavior of 2 sympatric Australian skink species (Lampropholis delicata and L. guichenoti). We found that juveniles from the hot treatment were larger than those on the cold treatment in L. guichenoti but not L. delicata. Using repeated behavioral measures for individual lizards, we found an interaction between incubation temperature and maternal investment in performance, with running speed being affected in a species-specific way by the treatment. We predicted that changes in performance should influence antipredator responses. In support of this prediction, we found that maternal investment impacted antipredator behavior, with animals from the yolk-reduced and cold treatment resuming activity faster after a simulated predatory attack in L. delicata. However, the prediction was not supported in L. guichenoti. Our results highlight the importance of exploring the multifaceted role that environments play across generations to understand how different anthropogenic factors will impact wildlife in the future.

Can plastic pollution contaminate loggerhead turtle nests? Evaluation of flame retardants (PBDEs) levels in the sand

Plastic pollution is a global environmental issue affecting multiple ecosystems, namely sea turtle nesting grounds. We analysed the potential chemical contamination caused by plastic debris in loggerhead turtle (Caretta caretta) nests, focusing on polybrominated diphenyl ethers (PBDEs, a class of flame retardants). For that, we conducted a field experiment in a turtle hatchery (Cabo Verde) by placing plastic fragments in the nests at two depths: surface and ~20 cm. We evaluated the nests' success and quantified the levels of PBDEs in the sand using GC-MS/MS. Our results suggest that plastics on the nests' surface can leak contaminants, infiltrating the sand up to 20 cm. Buried plastics showed no relevant leakage of chemicals. While hatching and emergence success was unaffected, we found a relationship between leucistic embryos and contamination levels. Our study highlights the threats of plastic accumulation on beaches, which can potentially leak chemicals and contaminate turtle nests.

Temperature along an elevation gradient determines Galapagos tortoise sex ratios

Climate change threatens endemic island ectothermic reptiles that display small population sizes and temperature-dependent sex determination (TSD). Studies of captive Galapagos tortoises demonstrate type A TSD with warmer incubation temperatures producing females. However, there are few published data from free-living Galapagos tortoises on incubation temperature regimes, and none on hatchling sex ratios in the wild or the potential impacts of climate change on future sex ratios. We sought to address these deficits by quantifying incubation temperatures of nests and sex ratios of juvenile tortoises along an elevation gradient on Santa Cruz Island. We focused on three geographically separated nesting zones with mean elevations of 14 m (lower), 57 m (middle), and 107 m (upper) above sea level. Nest temperatures in 54 nests distributed across the three nesting zones were measured every 4 h throughout the incubation period using iButton thermochrons. We used coelioscopy to conduct visual exams of gonads to determine the sex of 40 juvenile tortoises from the three nesting zones. During the middle trimester of incubation, the period during which sex is determined in turtles, mean nest temperatures were 25.75°C (SD = 1.08) in the upper zone, and 27.02°C (SD = 1.09), and 27.09°C (SD = 0.85) in the middle and lower zones, respectively. The proportion of juveniles that was male increased from 11.1% in the lower zone and 9.5% in the middle zone, to 80% in the upper zone. A ca. 50 m increase in elevation induced a decrease of >1.25°C in mean nest temperature during the second trimester of incubation. Over the same elevation change, the proportion of males in the juvenile tortoise population increased by ca. 70%. Temperatures on Galapagos are predicted to increase by 1-4°C over the next 50 years, which is likely to increase the frequency of female tortoises across the archipelago.

Environmental and pathological factors affecting the hatching success of the two northernmost loggerhead sea turtle (Caretta caretta) nests

In recent years, the report of loggerhead sea turtle (Caretta caretta) Mediterranean nesting range has expanded together with new records of nests becoming northward on the Italian coastline of the Tyrrhenian and Adriatic seas. These areas are characterized by intensive human activities, such as tourism, fishery, and marine traffic, all possibly involved in the influence of the use of coastal habitat by marine species. These anthropic threats, in addition to the natural ones and the changing environmental characteristics of the beach, may influence the growth of microorganisms causing hatching failures. Among microorganisms, fungal infection by the genus Fusarium (Link, 1809) is considered one of the main causes of globally declining sea turtle populations. In summer 2021, the two northernmost worldwide loggerhead sea turtle nests were monitored along the Northern Adriatic coastline (Veneto, Italy). These first records may potentially candidate this area as suitable for a large part of the loggerhead turtle's life cycle and it could represent a minor sea turtle nesting area that, according to Prato and colleagues, remained unnoticed due to the lack of specific monitoring. Sea Turtle Egg Fusariosis (STEF) was deemed to have deeply compromised the hatching success of the northmost one. Climate change and anthropogenic impacts have been scored as one of the highest hazards to sea turtle health and could have played a role in the STEF development. Environmental changes, human activities, and emerging pathogens deserve the highest attention in terms of health research, and conservation management.

Light Sandy Beaches Favour Hatching Success and Best Hatchling Phenotype of Loggerhead Turtles

We conducted a 5-year field (2017–2021) and laboratory study of the relationship between type of substrate and hatching success, embryonic development, and the quality of hatchlings in loggerhead turtle nests. Our study site, the island of Maio in the archipelago of Cabo Verde, one of the world’s largest loggerhead turtle nesting colonies, displays marked heterogeneity of sand colouration, with dark, mixed, and light sandy beaches. We experimentally incubated eggs, comparing different nesting substrates under standard temperature and humidity conditions. Females nest in all sand types without preference. However, both the field and experimental study revealed a significant difference in hatching success depending on the type of substrate. Substrate of volcanic origin, dark in colour, with a lower amount of calcium carbonate, had a lower hatching success (HS; 30.3 ± 20.2%) compared to substrates of mixed (HS = 46.1 ± 26.5%) or light (HS = 78.1 ± 18.2%) colour. Eggs experimentally incubated in substrate that was light-coloured, with a larger grain size and higher calcium carbonate concentration, produced significantly more and larger offspring. Incubation temperatures were significantly higher in dark substrate, which partially explains the lower hatching success in this type of sand. However, experimental incubation with controlled temperatures consistently showed lower hatching success in dark sand. Thus, we found that not only the temperature, but also the specific characteristics of each substrate determine hatching success. The main predator of eggs and hatchlings (the ghost crab Ocypode cursor) showed no significant differences in abundance or size between different substrate types. Our results indicate that nest site selection between beaches or even within the same beach with different substrate conditions affects hatching success, hatchling physical condition, and subsequently the reproductive success of each female. The results of this study can inform conservation programmes with nest management and controlled incubation in the field and optimise adaptive nest management under future scenarios of rising global temperatures.

Turtle Nest-Site Choice, Anthropogenic Challenges, and Evolutionary Potential for Adaptation

Oviparous animals, such as turtles, lay eggs whose success or demise depends on environmental conditions that influence offspring phenotype (morphology, physiology, and in many reptiles, also sex determination), growth, and survival, while in the nest and post-hatching. Consequently, because turtles display little parental care, maternal provisioning of the eggs and female nesting behavior are under strong selection. But the consequences of when and where nests are laid are affected by anthropogenic habitat disturbances that alter suitable nesting areas, expose eggs to contaminants in the wild, and modify the thermal and hydric environment experienced by developing embryos, thus impacting hatchling survival and the sexual fate of taxa with temperature-dependent sex determination (TSD) and genotypic sex determination (GSD). Indeed, global and local environmental change influences air, water, and soil temperature and moisture, which impact basking behavior, egg development, and conditions within the nest, potentially rendering current nesting strategies maladaptive as offspring mortality increases and TSD sex ratios become drastically skewed. Endocrine disruptors can sex reverse TSD and GSD embryos alike. Adapting to these challenges depends on genetic variation, and little to no heritability has been detected for nest-site behavior. However, modest heritability in threshold temperature (above and below which females or males develop in TSD taxa, respectively) exists in the wild, as well as interpopulation differences in the reaction norm of sex ratio to temperature, and potentially also in the expression of gene regulators of sexual development. If this variation reflects additive genetic components, some adaptation might be expected, provided that the pace of environmental change does not exceed the rate of evolution. Research remains urgently needed to fill current gaps in our understanding of the ecology and evolution of nest-site choice and its adaptive potential, integrating across multiple levels of organization.

Hatchery efficiency for turtle conservation in Cabo Verde

This paper evaluated the efficiency of beach hatcheries as a conservation tool for threatened sea turtle clutches. During six nesting seasons (2013 to 2018), several thousand high-risk clutches from loggerhead turtles (Caretta caretta) were relocated to a hatchery constructed on the same beach, within the Sea Turtle Natural Reserve (STNR, Boa Vista Island, Cabo Verde). Some parameters like hatching success; incubation period, hatchlings’ morphology and their behavioral response were compared to in-situ clutches.•

Our findings confirmed that the in-situ nests within the STNR had extremely high egg mortality that was usually over 70 %. Mean hatching success of clutches relocated to hatcheries was significantly higher than in-situ clutches with mean values between 70 to 85 % (p < 0.0001).

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No significant differences were observed in the incubation period (p = 0.786) and morphology of hatchlings (all p > 0.05) between relocated and in-situ clutches.

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This study provided a detailed method and recommendations for sea turtle clutches relocation to the hatchery, that can be beneficial for endangered sea turtle population specially where hatching success is very low.

Tissue and Temperature-Specific RNA-Seq Analysis Reveals Genomic Versatility and Adaptive Potential in Wild Sea Turtle Hatchlings (Caretta caretta)

Simple Summary

Digital transcriptomics is rapidly emerging as a powerful new technology for modelling the environmental dynamics of the adaptive landscape in diverse lineages. This is particularly valuable in taxa such as turtles and tortoises (order Testudines) which contain a large fraction of endangered species at risk due to anthropogenic impacts on the environment, including pollution, overharvest, habitat degradation, and climate change. Sea turtles (family Cheloniidae) in particular invite a genomics-enabled approach to investigating their remarkable portfolio of adaptive evolution. Our de novo transcriptome assemblies and measurements of tissue- and temperature- specific global gene expression in the loggerhead sea turtle (Caretta caretta) reveal the genomic basis for potential resiliency in this endangered flagship species, and are crucial to future management and conservation strategies with attention to changing climates. We summarize the interactions among differentially expressed genes by producing network visualizations, and highlight the shared biological pathways related to development, migration, immunity, and longevity reported in the avian and reptilian literature. Our original results for loggerhead sea turtles provide a large, new comparative genomic resource for the investigation of genotype–phenotype relationships in amniotes.

Abstract

Background: Digital transcriptomics is rapidly emerging as a powerful new technology for modelling the environmental dynamics of the adaptive landscape in diverse lineages. This is particularly valuable in taxa such as turtles and tortoises (order Testudines) which contain a large fraction of endangered species at risk due to anthropogenic impacts on the environment, including pollution, overharvest, habitat degradation, and climate change. Sea turtles (family Cheloniidae) in particular invite a genomics-enabled approach to investigating their remarkable portfolio of adaptive evolution. The sex of the endangered loggerhead sea turtle (Caretta caretta) is subject to temperature-dependent sex determination (TSD), a mechanism by which exposure to temperatures during embryonic development irreversibly determines sex. Higher temperatures produce mainly female turtles and lower temperatures produce mainly male turtles. Incubation temperature can have long term effects on the immunity, migratory ability, and ultimately longevity of hatchlings. We perform RNA-seq differential expression analysis to investigate tissue- and temperature-specific gene expression within brain (n = 7) and gonadal (n = 4) tissue of male and female loggerhead hatchlings. Results: We assemble tissue- and temperature-specific transcriptomes and identify differentially expressed genes relevant to sexual development and life history traits of broad adaptive interest to turtles and other amniotic species. We summarize interactions among differentially expressed genes by producing network visualizations, and highlight shared biological pathways related to migration, immunity, and longevity reported in the avian and reptile literature. Conclusions: The measurement of tissue- and temperature-specific global gene expression of an endangered, flagship species such as the loggerhead sea turtle (Caretta caretta) reveals the genomic basis for potential resiliency and is crucial to future management and conservation strategies with attention to changing climates. Brain and gonadal tissue collected from experimentally reared loggerhead male and female hatchlings comprise an exceedingly rare dataset that permits the identification of genes enriched in functions related to sexual development, immunity, longevity, and migratory behavior and will serve as a large, new genomic resource for the investigation of genotype–phenotype relationships in amniotes.

Globally important refuge for the loggerhead sea turtle: Maio Island, Cabo Verde

One of the largest nesting colonies of the Vulnerable loggerhead sea turtle Caretta caretta is in Cabo Verde. Here we present the first comprehensive study of loggerhead turtle nesting on the island of Maio in Cabo Verde. During 2016–2019 we monitored 38 km of undeveloped sandy beaches that have minimal artificial lighting and where all nesting on Maio takes place. We counted 4,063 nests in 2016, 5,429 in 2017, 14,364 in 2018 and 7,937 in 2019. The estimated total number of females was 1,016, 1,357, 3,591 and 1,984 in each of these years, respectively. Our findings suggest there are more loggerhead turtles nesting in Cabo Verde than previously estimated, and that this could be the species’ largest nesting subpopulation (followed by Florida, USA and Oman). The inter-annual hatching success (the proportion of eggs producing hatchlings) was 29–38% for the whole island but varied between sites. Our study of 250 clutches showed that flooding affected 38–61% and predation by crabs 40–42%, with hatching success on different beaches in the range of 1–59%. Poaching of eggs was rare (< 2% of clutches), but dogs predated 68.4% of all clutches on the beach nearest the largest human settlement. We evaluated different nest management strategies at multiple sites and estimated productivity of hatchlings (the number of hatchlings that would reach the sea for each management strategy), finding that hatcheries are not always the best option for nest management. As the beaches on Maio are relatively undisturbed, and there is a high abundance and density of turtle nests, the island should be protected as a globally important site for the conservation of the loggerhead turtle, and of coastal biodiversity more broadly.

How deep is deep enough? Analysis of sea turtle eggs nest relocation procedure at Chagar Hutang Turtle Sanctuary

Sea turtle eggs incubation involves natural and artificial incubation of eggs, and indeed the depth will be varied and presumably affect the development of hatchlings. For nest relocation, the researcher needs to decide on the depth to incubate the eggs. Sea turtle eggs clutches may vary between 40 and 120 eggs for the green turtle, thus using a single value as the standard procedure might affect the quality of hatchlings. Here we quantify the dimension of the natural (in-situ) nest constructed by the nester and the artificial (ex-situ) built by our ranger during nest relocation. We suggest a linear regression calculation of Y = 0.2366X + 59.3267, better predict a more accurate nest depth based on the number of eggs to imitate the natural nest.

Multiple maternal risk-management adaptations in the loggerhead sea turtle (Caretta caretta) mitigate clutch failure caused by catastrophic storms and predators

Maternal risk-management, an extension of r/K selection, is an indispensable tool for understanding the natural selection pressures that shape the evolution of reproduction. Central to the construct of maternal risk-management is its definition of reproductive success as replacement fitness (w = 2), the survival of one breeding daughter to replace the female and one outbreeding son to replace her mate. Here, I apply maternal risk-management as a theoretical framework to explain multiple reproductive adaptations by loggerhead sea turtles nesting on a barrier island off the southern coast of Florida, US, from 1988 to 2004. Extrapolated over a 30-year reproductive span, nesting females averaged 4000-4500 eggs. I show that, rather than "putting all their eggs in one basket," females divided eggs into 40 clutches of variable size (50-165 eggs). To deposit clutches, females migrated to the barrier island 10-12 times at unpredictable intervals of 2-8 years. Each nesting season, females deposited 1-7 clutches over diversified time intervals at diversified locations on the beach. Despite devastating clutch losses caused by ten catastrophic hurricanes, hundreds of erratic thunderstorms and dozens of predation events during this study, 72% of clutches produced by nesting females on this barrier island were undisturbed-median hatching success for these clutches was an astonishing 92%. I conclude that diversified maternal investments over time and space by nesting females are reproductive adaptations that have successfully offset clutch losses, thus enabling populations of loggerhead females to meet or exceed their reproductive goal of replacement fitness.

Quantifying the impacts of future sea level rise on nesting sea turtles in the southeastern United States

Sandy beaches, a necessary habitat for nesting sea turtles, are increasingly under threat as they become squeezed between human infrastructure and shorelines that are changing as a result of rising sea levels. Forecasting where shifting sandy beaches will be obstructed and how that directly impacts coastal nesting species is necessary for successful conservation and management. Predicting changes to coastal nesting areas is difficult because of a lack of consensus on the physical attributes used by females in nesting site choice. In this study, we leveraged long-term data sets of nesting localities for two sea turtle species, loggerhead sea turtle, Caretta caretta, and green sea turtle, Chelonia mydas, within four barrier island National Seashores in the southeastern United States to predict future nesting beach area based on where these species currently nest in relation to mean high water. We predicted the future location of nesting areas based on a sea level rise scenario for 2100 and quantified how impervious surfaces will inhibit future beach movement, which will impact both the total available nesting area and the percentage of nesting area predicted to flood following a hurricane-related storm surge. Contrary to our expectations, those barrier islands with the greatest levels of human infrastructure were not projected to experience the greatest percentage of sea turtle nesting area loss due to sea level rise or storm surge events. Notably, loss of nesting beach areas will not have equal impacts across the four Seashores; the Seashore projected to have the least amount of total nesting area lost and percentage nesting area lost currently has the highest nesting densities of our two study species, suggesting that even low levels of beach loss could have substantial impacts on future nesting densities and disproportionate impacts on the population growth of these species. Our novel method of estimating current and future nesting beach area can be broadly applied to studies requiring a bounded area that encompasses the part of a beach used by nesting coastal species and will be useful in comparing future global nesting densities and population trajectories under projected future sea level rise and storm surge activity.

Buried treasure-marine turtles do not 'disguise' or 'camouflage' their nests but avoid them and create a decoy trail

After laying their eggs and refilling the egg chamber, sea turtles scatter sand extensively around the nest site. This is presumed to camouflage the nest, or optimize local conditions for egg development, but a consensus on its function is lacking. We quantified activity and mapped the movements of hawksbill (Eretmochelys imbricata) and leatherback (Dermochelys coriacea) turtles during sand-scattering. For leatherbacks, we also recorded activity at each sand-scattering position. For hawksbills, we recorded breathing rates during nesting as an indicator of metabolic investment and compared with published values for leatherbacks. Temporal and inferred metabolic investment in sand-scattering was substantial for both species. Neither species remained near the nest while sand-scattering, instead moving to several other positions to scatter sand, changing direction each time, progressively displacing themselves from the nest site. Movement patterns were highly diverse between individuals, but activity at each sand-scattering position changed little between completion of egg chamber refilling and return to the sea. Our findings are inconsistent with sand-scattering being to directly camouflage the nest, or primarily for modifying the nest-proximal environment. Instead, they are consistent with the construction of a series of dispersed decoy nests that may reduce the discovery of nests by predators.

The Role of Nest Depth and Site Choice in Mitigating the Effects of Climate Change on an Oviparous Reptile

Climate change is likely to have strong impacts on oviparous animals with minimal parental care, because nest temperature can impact egg development, sex, and survival, especially in the absence of mitigation via parental care. Nesting females may compensate for increasing temperatures by altering how, when, and where they nest. We examined the factors determining nest depth and site choice as well as the effects that nest depth and location have on nest temperature and hatching success in the diamondback terrapin (Malaclemys terrapin). We found that nest depth was not correlated with nesting female size, egg characteristics, or daily temperatures. Nest temperatures and hatching success were correlated with different environmental and nest characteristics between 2004, a cool and wet year, and 2005, a hot and dry year. Females selected nests with lower southern overstory vegetation in 2005. These results suggest that nest depth and location can play an important yet varying role in determining nest temperature and hatching success in more extreme warm and dry environmental conditions and, therefore, may mitigate the impacts of climate change on oviparous reptiles. However, we found minimal evidence that turtles choose nest locations and depths that maximize offspring survival based on short-term environmental cues.

Conservation importance of previously undescribed abundance trends: increase in loggerhead turtle numbers nesting on an Atlantic island

For many species abundance data from across their entire range are incomplete, and therefore it is difficult to accurately assess their conservation status. Even for species that are large, charismatic and relatively easy to study, conservation assessments are often hampered by lack of data. Here we report a marked, previously undescribed, increase in numbers at a breeding colony of the loggerhead turtle Caretta caretta, a species that is Critically Endangered in several parts of its range, and place this report in the global context for this species. We present a 10-year (2008–2017) dataset of nesting activities for this species on the island of Sal, one of the Cape Verde islands in the Atlantic Ocean. Foot patrols recorded 21,938 nests during the study period. We estimate that the annual number of nests on Sal increased from 506 in 2008 to 7,771 in 2017. Taking into account that there are only two known loggerhead turtle rookeries (on Masirah Island, Oman, and in Florida, USA) with > 50,000 nests reported annually, and few with > 1,000 nests per year, our results suggest that Sal is one of the 10 largest loggerhead turtle rookeries globally. Our work highlights the conservation significance of reporting trends in abundance at breeding sites for marine turtles and other taxa.