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Samari F, Hemmateenejad B, Aparicio S, Rashidi M, Shamsipur M, Hosseini SM. Intercalative binding of two new five-coordinated anticancer Pt(II) complexes to DNA: experimental and computational approaches. J Biomol Struct Dyn 2023; 41:8751-8761. [PMID: 36318521 DOI: 10.1080/07391102.2022.2137240] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Accepted: 10/11/2022] [Indexed: 11/05/2022]
Abstract
Binding interaction of two organoplatinum complexes, [Pt(C^N)Cl(dppa)], 1, and [Pt(C^N)Cl(dppm)], 2, (C^N = N(1), C(2')-chelated, deprotonated 2-phenylpyridine, dppa = bis(diphenylphosphino)amine, dppm = bis(diphenylphosphino)methane), as anti-tumor agents, with calf thymus DNA (CT-DNA) under pseudo-physiological conditions has been investigated using various biophysical techniques viz., UV-Vis and fluorescence spectroscopies, viscosity measurements, and thermal denaturation experiments. A hypochromic shift in UV-Vis absorption titration, fluorescence enhancement of Pt(II) complexes in the presence of CT-DNA, fluorescence quenching in competitive ethidium bromide displacement assay, and an uptrend in the viscosity (η) and melting temperature (Tm) indicated the existence of a tight intercalative interaction of Pt(II) complexes with CT-DNA. The fluorescence quenching of CT-DNA was a combined quenching of static and dynamic with Stern-Volmer quenching constants of 7.520 × 103 M-1 for complex 1 and 5.183 × 103 M-1 for complex 2, at low concentrations of Pt(II) complexes. Besides the experimental studies, computational studies were done. Molecular modeling studies confirmed the intercalation of the studied complexes by the phenyl groups of dppa and dppm, leading to π-π interactions but with a certain steric hindrance because of the size and shape of the considered complexes. The combination of experimental and computational data showed that reported Pt(II) complexes are promising structures and could be developed for cancer therapeutic applications.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Fayezeh Samari
- Department of Chemistry, Faculty of Sciences, University of Hormozgan, Bandar Abbas, Iran
- Nanoscience, Nanotechnology and Advanced Materials Research Center, University of Hormozgan, Bandar Abbas, Iran
| | | | | | - Mehdi Rashidi
- Department of Chemistry, Shiraz University, Shiraz, Iran
| | | | - Sayed Mostafa Hosseini
- Department of Chemistry, Faculty of Sciences, University of Hormozgan, Bandar Abbas, Iran
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2
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Varghese N, Jose JR, Krishna PM, Philip D, Joy F, Vinod TP, Prathapachandra Kurup MR, Nair Y. In vitro
Analytical Techniques as Screening Tools to investigate the Metal chelate‐DNA interactions. ChemistrySelect 2023. [DOI: 10.1002/slct.202203615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Affiliation(s)
- Nikita Varghese
- Department of Chemistry CHRIST (Deemed to be University) Hosur Road Bengaluru 560 029 Karnataka India
| | - Joyna Reba Jose
- Department of Chemistry CHRIST (Deemed to be University) Hosur Road Bengaluru 560 029 Karnataka India
| | - P. Murali Krishna
- Department of Chemistry Ramaiah institute of technology MSRIT Post, M S Ramaiah Nagar Bengaluru 560054 Karnataka India
| | - Darit Philip
- Department of Chemistry CHRIST (Deemed to be University) Hosur Road Bengaluru 560 029 Karnataka India
| | - Francis Joy
- Department of Chemistry CHRIST (Deemed to be University) Hosur Road Bengaluru 560 029 Karnataka India
| | - T. P. Vinod
- Department of Chemistry CHRIST (Deemed to be University) Hosur Road Bengaluru 560 029 Karnataka India
| | | | - Yamuna Nair
- Department of Chemistry CHRIST (Deemed to be University) Hosur Road Bengaluru 560 029 Karnataka India
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3
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Shahabadi N, Zendehcheshm S, Mahdavi M. Exploring the In‐Vitro Antibacterial Activity and Protein (Human Serum Albumin, Human Hemoglobin and Lysozyme) Interaction of Hexagonal Silver Nanoparticle Obtained from Wood Extract of Wild Cherry Shrub. ChemistrySelect 2023. [DOI: 10.1002/slct.202204672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Nahid Shahabadi
- Inorganic Chemistry Department, Faculty of Chemistry Razi University Kermanshah Iran
- Medical Biology Research Center (MBRC) Kermanshah University of Medical Sciences Kermanshah Iran
| | - Saba Zendehcheshm
- Inorganic Chemistry Department, Faculty of Chemistry Razi University Kermanshah Iran
- Medical Biology Research Center (MBRC) Kermanshah University of Medical Sciences Kermanshah Iran
| | - Mohammad Mahdavi
- Inorganic Chemistry Department, Faculty of Chemistry Razi University Kermanshah Iran
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Shahabadi N, Zendehcheshm S, Khademi F. Exploring the ct-DNA and plasmid DNA binding affinity of the biogenic synthesized Chloroxine-conjugated silver nanoflowers: Spectroscopic and gel electrophoresis methods. Process Biochem 2022. [DOI: 10.1016/j.procbio.2022.07.024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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5
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Nakamura Y, Wakabayashi M, Sadakane K, Ohta T, Oe Y. Synthesis of Cationic Sandwich-type Ruthenium Complexes with η 6-Arene Ligands Bearing Long Alkyl Chains and Their Behavior in Water. CHEM LETT 2022. [DOI: 10.1246/cl.220247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Yushi Nakamura
- Department of Biomedical Sciences and Informatics, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Kyoto 610-0394
| | - Misato Wakabayashi
- Department of Biomedical Sciences and Informatics, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Kyoto 610-0394
| | - Koichiro Sadakane
- Department of Biomedical Sciences and Informatics, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Kyoto 610-0394
| | - Tetsuo Ohta
- Department of Biomedical Sciences and Informatics, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Kyoto 610-0394
| | - Yohei Oe
- Department of Biomedical Sciences and Informatics, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Kyoto 610-0394
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Li W, Liu X, Tan LF. Binding properties of [Ru(phen)2(11-R-dppz)]2+ (R = F or CN) with poly(A)•poly(U) duplex RNA. J Inorg Biochem 2022; 232:111833. [DOI: 10.1016/j.jinorgbio.2022.111833] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2022] [Revised: 04/06/2022] [Accepted: 04/12/2022] [Indexed: 10/18/2022]
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7
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de Almeida PSVB, de Arruda HJ, Sousa GLS, Ribeiro FV, de Azevedo-França JA, Ferreira LA, Guedes GP, Silva H, Kummerle AE, Neves AP. Cytotoxicity evaluation and DNA interaction of Ru II-bipy complexes containing coumarin-based ligands. Dalton Trans 2021; 50:14908-14919. [PMID: 34609400 DOI: 10.1039/d1dt01567b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Although there are various treatment options for cancer, this disease still has caused an increasing number of deaths, demanding more efficient, selective and less harmful drugs. Several classes of ruthenium compounds have been investigated as metallodrugs for cancer, mainly after the entry of imidazolH [trans-RuCl4-(DMSO-S)(imidazole)] (NAMI-A) and indazolH [trans-RuCl4-(Indazol)2] (KP1019) in clinical trials. In this sense, RuII complexes with general formula [Ru(L1-3)(bipy)2]PF6 (1-3) (L1 = ethyl 3-(6-methyl-2-oxo-2H-chromen-3-yl)-3-oxopropanoate, L2 = ethyl 3-(7-(diethylamino)-2-oxo-2H-chromen-3-yl)-3-oxopropanoate, L3 = ethyl 3-(8-methoxy-2-oxo-2H-chromen-3-yl)-3-oxopropanoate and bipy = bipyridine) have been synthesized. The crystal structure of 2 revealed that the RuII atom lies on a distorted octahedral geometry with the deprotonated ligand (L2-) coordinated through β-ketoester group oxygen atoms. In vitro cytotoxic activity of the compounds was evaluated against 4T1 (murine mammary carcinoma) and B16-F10 (murine metastatic melanoma) tumor cells, and the non-tumor cell line BHK-21 (baby hamster kidney). Coordination with RuII resulted in expressive enhancement of cytotoxic activity. The precursors were inactive below 100 μM and the final RuII complexes (1-3) showed IC50 ranging from 2.0 to 12.8 μM; 2 being the most potent compound. DNA interaction studies revealed a greater capacity of the complexes to interact with DNA than the ligands, where, 2 exhibited the highest Kb constant of 2.2 × 104 M-1. Fluorescence investigation demonstrated that 1-3 are capable of quenching the fluorescence emission of the EtdBr-DNA complex up to 40%. Molecular docking showed that the interaction of 1-3 between the DNA base pairs from the coumarin portion was with scores of 67.28, 68.62 and 64.88, respectively, and 75.45 for ellipticine, suggesting an intercalative mode of binding. Our findings show that the RuII complexes are eligible for continuing to be investigated as potential antitumor compounds.
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Affiliation(s)
- Patrícia S V B de Almeida
- Instituto de Química, Universidade Federal Rural do Rio de Janeiro, BR 465 Km 7, 23890-000, Seropédica, RJ, Brazil.
| | - Henrique Jefferson de Arruda
- Instituto de Química, Universidade Federal Rural do Rio de Janeiro, BR 465 Km 7, 23890-000, Seropédica, RJ, Brazil.
| | - Gleyton Leonel S Sousa
- Instituto de Química, Universidade Federal Rural do Rio de Janeiro, BR 465 Km 7, 23890-000, Seropédica, RJ, Brazil.
| | - Felipe Vitório Ribeiro
- Instituto de Química, Universidade Federal Rural do Rio de Janeiro, BR 465 Km 7, 23890-000, Seropédica, RJ, Brazil.
| | | | - Larissa A Ferreira
- Instituto de Química, Universidade Federal Rural do Rio de Janeiro, BR 465 Km 7, 23890-000, Seropédica, RJ, Brazil.
| | - Guilherme P Guedes
- Instituto de Química, Universidade Federal Fluminense, Niterói, RJ, Brazil
| | - Heveline Silva
- Instituto de Ciências Exatas, Departamento de Química, Universidade Federal de Minas Gerais, MG, Brazil
| | - Arthur E Kummerle
- Instituto de Química, Universidade Federal Rural do Rio de Janeiro, BR 465 Km 7, 23890-000, Seropédica, RJ, Brazil.
| | - Amanda P Neves
- Instituto de Química, Universidade Federal Rural do Rio de Janeiro, BR 465 Km 7, 23890-000, Seropédica, RJ, Brazil.
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Estalayo-Adrián S, Blasco S, Bright SA, McManus GJ, Orellana G, Williams DC, Kelly JM, Gunnlaugsson T. Effect of Alkyl Chain Length on the Photophysical, Photochemical, and Photobiological Properties of Ruthenium(II) Polypyridyl Complexes for Their Application as DNA-Targeting, Cellular-Imaging, and Light-Activated Therapeutic Agents. ACS APPLIED BIO MATERIALS 2021; 4:6664-6681. [PMID: 35006970 DOI: 10.1021/acsabm.1c00284] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A family of six Ru(II) polypyridyl complexes (1-6) which contain phenanthroline-based ligands functionalized with alkyl chains of different lengths (one methyl group, 10 and 21 carbon alkyl chains) and either 1,10-phenanthroline (phen) or 1,4,5,8-tetraazaphenanthrene (TAP) as ancillary ligands have been synthesized and characterized. The influence of the alkyl chain length on their photophysical and photochemical properties as well as in their photobiological applications has been elucidated by monitoring the changes in their MLCT-centered absorption and emission bands. The presence of one methyl group or 10 carbon alkyl chains does not seem to significantly affect the photophysical and photochemical properties of the resulting Ru(II) complexes when compared to the well-known [Ru(phen)3]2+ and [Ru(TAP)2phen]2+. However, an effect on their emission properties and in their ability to photosensitize singlet oxygen is observed for the Ru(II) complexes containing 21 carbon alkyl chains. The binding of these complexes to salmon testes DNA (stDNA) was investigated by observing the changes in the photophysical properties. Complexes 1, 2, 4, and 5 all showed changes in their MLCT bands that could be analyzed using conventional fitting methods, such as the Bard equation. In contrast, complexes 3 and 6, possessing long aliphatic chains, gave rise to nonclassic behavior. In addition to these analyses, both thermal denaturation and circular dichroism studies of 1-6 were carried out in the presence of stDNA which confirmed that these complexes bind to DNA. Confocal microscopy and viability studies in HeLa cervical cancer cells reveal an alkyl chain-length dependence on the cellular uptake and cytotoxicity of the resulting Ru(II) complexes due to an enhancement of their lipophilicity with increasing alkyl chain length. Thus, complexes containing 10 and 21 carbon alkyl chains are rapidly taken up into HeLa cells and, in particular, those with 21 carbon alkyl chains show a significant phototoxicity against the same cell line. Therefore, this study provides further insight into the possible modulation of the photophysical, photochemical, and photobiological properties of Ru(II) polypyridyl complexes by varying the length of the alkyl chains attached to the polypyridyl ligands coordinated to the Ru(II) center and the nature of the auxiliary groups, which we show has a significant effect on photophysical and biological properties.
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Affiliation(s)
- Sandra Estalayo-Adrián
- School of Chemistry and Trinity Biomedical Sciences Institute (TBSI), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland.,Advanced Materials and BioEngineering Research (AMBER) Centre, Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Salvador Blasco
- School of Chemistry and Trinity Biomedical Sciences Institute (TBSI), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Sandra A Bright
- School of Biochemistry and Immunology, Trinity Biomedical Sciences Institute (TBSI), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Gavin J McManus
- School of Biochemistry and Immunology, Trinity Biomedical Sciences Institute (TBSI), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Guillermo Orellana
- Department of Organic Chemistry, Faculty of Chemistry, Universidad Complutense de Madrid, E-28040 Madrid, Spain
| | - D Clive Williams
- School of Biochemistry and Immunology, Trinity Biomedical Sciences Institute (TBSI), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - John M Kelly
- School of Chemistry and Trinity Biomedical Sciences Institute (TBSI), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Thorfinnur Gunnlaugsson
- School of Chemistry and Trinity Biomedical Sciences Institute (TBSI), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland.,Advanced Materials and BioEngineering Research (AMBER) Centre, Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
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9
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Balou S, Zarkadoulas A, Koukouvitaki M, Marchiò L, Efthimiadou EK, Mitsopoulou CA. Synthesis, DNA-Binding, Anticancer Evaluation, and Molecular Docking Studies of Bishomoleptic and Trisheteroleptic Ru-Diimine Complexes Bearing 2-(2-Pyridyl)-quinoxaline. Bioinorg Chem Appl 2021; 2021:5599773. [PMID: 34093697 PMCID: PMC8137304 DOI: 10.1155/2021/5599773] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Accepted: 04/21/2021] [Indexed: 11/17/2022] Open
Abstract
Herein, we report the synthesis and characterization of a bishomoleptic and a trisheteroleptic ruthenium (II) polypyridyl complex, namely, [Ru(bpy)2(2, 2'-pq)](PF6)2 (1) and [Ru(bpy) (phen) (2, 2'-pq)](PF6)2 (2), respectively, where bpy = 2,2'-bipyridine, phen = 1,10-phenanthroline, and 2, 2'-pq = 2-(2'-pyridyl)-quinoxaline. The complexes were characterized by elemental analysis, TGA, 1H-NMR, FT-IR, UV-Vis, emission spectroscopy, and electrochemistry. Their structures were confirmed by single-crystal X-ray diffraction analysis. Complexes 1 and 2 were crystalized in orthorhombic, Pbca, and monoclinic, P21/n systems, respectively. Various spectroscopic techniques were employed to investigate the interaction of both complexes with calf thymus DNA (CT-DNA). The experimental data were confirmed by molecular docking studies, employing two different DNA sequences. Both complexes, 1 and 2, bind with DNA via a minor groove mode of binding. MTT experiments revealed that both complexes induce apoptosis of MCF-7 (breast cancer) cells in low concentrations. Confocal microscopy indicated that 2 localizes in the nucleus and internalizes more efficiently in MCF-7 than in HEK-293.
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Affiliation(s)
- Sofia Balou
- Inorganic Chemistry Laboratory, Chemistry Department, National and Kapodistrian University of Athens, Panepistimiopolis, Zografou 157 71, Greece
| | - Athanasios Zarkadoulas
- Inorganic Chemistry Laboratory, Chemistry Department, National and Kapodistrian University of Athens, Panepistimiopolis, Zografou 157 71, Greece
| | - Maria Koukouvitaki
- Inorganic Chemistry Laboratory, Chemistry Department, National and Kapodistrian University of Athens, Panepistimiopolis, Zografou 157 71, Greece
| | - Luciano Marchiò
- Dipartimento di Scienze Chimiche, della Vita e della Sostenibilità Ambientale, Università degli Studi Parma, Parco Area delle Scienze 17A, I43124 Parma, Italy
| | - Eleni K. Efthimiadou
- Inorganic Chemistry Laboratory, Chemistry Department, National and Kapodistrian University of Athens, Panepistimiopolis, Zografou 157 71, Greece
| | - Christiana A. Mitsopoulou
- Inorganic Chemistry Laboratory, Chemistry Department, National and Kapodistrian University of Athens, Panepistimiopolis, Zografou 157 71, Greece
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