The self-diffusion and hydrogen bond interaction in neat liquid alkanols: a molecular dynamic simulation study

Self-diffusion and shear viscosity of pure 1-alkanol unary system: molecular dynamics simulation and review of experimental data

Self-diffusion coefficients and shear viscosity coefficients of pure 1-alkanol liquids from methanol to 1-hexanol were predicted using molecular dynamics (MD) simulations. These coefficients have been calculated using the Green-Kubo and Einstein methods at a range of temperatures of 200-330 K with increments of 10 K. Two force fields, TraPPE-UA and OPLS-AA were applied. The predicted results were compared to the experimental data, and the activation energies for self-diffusion and shear viscosity were calculated using the Arrhenius equation. The Stokes-Einstein equation was used to examine its capability in predicting the relationship between self-diffusion and shear viscosity, and the effective hydrodynamic radius was determined using both the experimental data and the results from MD simulations. The TraPPE-UA force field showed better results for the transport properties of methanol, while the OPLS-AA force field performed well for predicting shear viscosity but weakly for self-diffusion, particularly at low temperatures and for 1-alkanol with higher methylene numbers. Using the mean squared displacement method for self-diffusion was found to be more accurate than the Green-Kubo method, while the Green-Kubo method was slightly better for calculating shear viscosity. The Stokes-Einstein equation is valid for pure 1-alkanol liquids with temperature-dependent effective hydrodynamic radius.

Treatment of isopropanol wastewater in an anaerobic fluidized bed microbial fuel cell filled with macroporous adsorptive resin as multifunctional biocarrier

The isopropanol (IPA) wastewater was treated in an anaerobic fluidized bed microbial fuel cell (AFB-MFC) filled with macroporous adsorptive resin (MAR) particles as multifunctional biocarrier. MAR was used as a biological carriers and adsorbent. MAR was characterized by scanning electron microscope. The diffusion of isopropanol in MAR was studied by Materials Studio (MS) software, and diffusion coefficients were analyzed and calculated by molecular dynamics simulation. The simulation results were qualitatively consistent with the available experimental data. The diffusivity of IPA in MAR increased firstly, with the increasing IPA weight, and then decreased. The maximum diffusivity was resulted to be 0.3722 Å²/ps. In addition, the response surface methodology (RSM) and Box-Behnken design were used to study the effects of initial IPA concentration, flow rate and external resistance on performance of power output and pollutant degradation. The optimal experimental condition was observed as initial IPA concentration of 483.49 mg/L, a flow rate of 57.70 mL/min, and external resistance of 5225.78 Ω. After 21 h of operation under the optimized conditions, the maximum power density was 135.73 ± 0.17 mW/m² and the COD removal was 68.21 ± 0.24%, which increased by 65.85% and 9.29%, respectively.

Geometry of OH⋯O interactions in the liquid state of linear alcohols from ab initio molecular dynamics simulations

Hydrogen bonding OH···O geometries in the liquid state of linear alcohols, derived from ab initio MD simulations, show no change from methanol to pentanol, in contrast to that observed in their crystalline state.

Evolution of diffusion and structure of six n-alkanes in carbon dioxide at infinite dilution over wide temperature and pressure ranges: a molecular dynamics study

Over wide temperature and pressure ranges, the molecular dynamics simulation is performed to study the mass transfer of six n-alkanes from n-C₅H₁₂ to n-C₁₀H₂₂ in CO₂ at infinite dilution by calculating the diffusion coefficients, which have not yet been measured by experiment. Meanwhile, the structural properties of these systems are explored. It is found that under different temperature and pressure conditions, the variation trends of the radial distribution functions of n-alkanes are quite different, while the variation trends of the average coordination number of n-alkanes can be divided into three types. The radius of gyration and the solvent accessible surface area are both affected by temperature and carbon chain length, but their variation trends are different, and it could explain the abnormal variation trends of the radial distribution functions and the average coordination number. Graphical abstract Over wide temperature and pressure ranges, the variation trends of the average coordination number of n-alkanes can be divided into three types.

MD simulation study of the diffusion and local structure of n-alkanes in liquid and supercritical methanol at infinite dilution

The diffusion coefficients of 14 n-alkanes (ranging from methane to n-tetradecane) in liquid and supercritical methanol at infinite dilution (at a pressure of 10.5 MPa and at temperatures of 299 K and 515 K) were deduced via molecular dynamics simulations. Values for the radial distribution function, coordination number, and number of hydrogen bonds were then calculated to explore the local structure of each fluid. The flexibility of the n-alkane (as characterized by the computed dihedral distribution, end-to-end distance, and radius of gyration) was found to be a major influence and hydrogen bonding to be a minor influence on the local structure. Hydrogen bonding reduces the flexibility of the n-alkane, whereas increasing the temperature enhances its flexibility, with temperature having a greater effect than hydrogen bonding on flexibility. Graphical abstract The flexibility of the alkane is a major influence and the hydrogen bonding is a minor influence on the first solvation shell; the coordination numbers of long-chain n-alkanes in the first solvation shell are rather low.