1
|
Zhao Q, Nishihara H, Crespo-Otero R, Di Tommaso D. Unveiling Carbon Cluster Coating in Graphene CVD on MgO: Combining Machine Learning Force field and DFT Modeling. ACS APPLIED MATERIALS & INTERFACES 2024; 16:53231-53241. [PMID: 39302157 PMCID: PMC11450684 DOI: 10.1021/acsami.4c11398] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2024] [Revised: 09/07/2024] [Accepted: 09/12/2024] [Indexed: 09/22/2024]
Abstract
In this study, we investigate the behavior of carbon clusters (Cn, where n ranges from 16 to 26) supported on the surface of MgO. We consider the impact of doping with common impurities (such as Si, Mn, Ca, Fe, and Al) that are typically found in ores. Our approach combines density functional theory calculations with machine learning force field molecular dynamics simulations. It is found that the C21 cluster, featuring a core-shell structure composed of three pentagons isolated by three hexagons, demonstrates exceptional stability on the MgO surface and behaves as an "enhanced binding agent" on MgO-doped surfaces. The molecular dynamics trajectories reveal that the stable C21 coating on the MgO surface exhibits less mobility compared to other sizes Cn clusters and the flexible graphene layer on MgO. Furthermore, this stability persists even at temperatures up to 1100K. The analysis of the electron localization function and potential function of Cn on MgO reveals the high localization electron density between the central carbon of the C21 ring and the MgO surface. This work proposes that the C21 island serves as a superstable and less mobile precursor coating on MgO surfaces. This explanation sheds light on the experimental defects observed in graphene products, which can be attributed to the reduced mobility of carbon islands on a substrate that remains frozen and unchanged.
Collapse
Affiliation(s)
- Qi Zhao
- Department
of Chemistry, Queen Mary University of London, London E1 4NS, U.K.
| | - Hirotomo Nishihara
- Institute
of Multidisciplinary Research for Advance Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi 980-8577, Japan
- Advanced
Institute for Materials Research (WPI-AIMR), Tohoku University, 2-1-1
Katahira, Aoba-ku, Sendai, Miyagi 980-8577, Japan
| | | | - Devis Di Tommaso
- Department
of Chemistry, Queen Mary University of London, London E1 4NS, U.K.
- Digital
Environment Research Institute, Queen Mary
University of London, Empire House, London E1
1HH, U.K.
| |
Collapse
|
2
|
Lupo Pasini M, Samolyuk G, Eisenbach M, Choi JY, Yin J, Yang Y. First-principles data for solid solution niobium-tantalum-vanadium alloys with body-centered-cubic structures. Sci Data 2024; 11:907. [PMID: 39174589 PMCID: PMC11341824 DOI: 10.1038/s41597-024-03720-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Accepted: 07/31/2024] [Indexed: 08/24/2024] Open
Abstract
We present four open-source datasets that provide results of density functional theory (DFT) calculations of ground-state properties of refractory solid solution binary alloys niobium-tantalum (NbTa), niobium-vanadium (NbV), tantalum-vanadium (TaV), and ternary alloys NbTaV ordered in body-centered-cubic (BCC) structures with 128 Bravais lattice sites. The first-principles code used to run the calculations is the Vienna Ab-Initio Simulation Package. The calculations have been collected by uniformly sampling chemical compositions across the entire compositional range. For each chemical composition, the calculations have been run for 100 randomized arrangements of the constituents on the BCC lattice sites. This sampling methodology resulted in running DFT simulations for a total of 3,100 randomized atomic configurations over 31 chemical compositions for each of the three binary alloys Nb-Ta, Nb-V, Ta-V, and a total of 10,500 randomized atomic structures over 105 chemical compositions for the ternary alloys Nb-Ta-V. For each atomic configuration, geometry optimization has been performed, and the data released contains information about each step of geometry optimization for each atomic configuration.
Collapse
Affiliation(s)
- Massimiliano Lupo Pasini
- Oak Ridge National Laboratory, Computational Sciences and Engineering Division, Oak Ridge, 37831, USA.
| | - German Samolyuk
- Oak Ridge National Laboratory, Materials Sciences and Technology Division, Oak Ridge, 37831, USA.
| | - Markus Eisenbach
- Oak Ridge National Laboratory, National Center of Computational Sciences, Oak Ridge, 37831, USA
| | - Jong Youl Choi
- Oak Ridge National Laboratory, Computer Science and Mathematics Division, Oak Ridge, 37831, USA
| | - Junqi Yin
- Oak Ridge National Laboratory, National Center of Computational Sciences, Oak Ridge, 37831, USA
| | - Ying Yang
- Oak Ridge National Laboratory, Materials Sciences and Technology Division, Oak Ridge, 37831, USA
| |
Collapse
|
3
|
Waters MJ, Rondinelli JM. Benchmarking structural evolution methods for training of machine learned interatomic potentials. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2022; 34:385901. [PMID: 35797983 DOI: 10.1088/1361-648x/ac7f73] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Accepted: 07/07/2022] [Indexed: 06/15/2023]
Abstract
When creating training data for machine-learned interatomic potentials (MLIPs), it is common to create initial structures and evolve them using molecular dynamics (MD) to sample a larger configuration space. We benchmark two other modalities of evolving structures, contour exploration (CE) and dimer-method (DM) searches against MD for their ability to produce diverse and robust density functional theory training data sets for MLIPs. We also discuss the generation of initial structures which are either from known structures or from random structures in detail to further formalize the structure-sourcing processes in the future. The polymorph-rich zirconium-oxygen composition space is used as a rigorous benchmark system for comparing the performance of MLIPs trained on structures generated from these structural evolution methods. Using Behler-Parrinello neural networks as our MLIP models, we find that CE and the DM searches are generally superior to MD in terms of spatial descriptor diversity and statistical accuracy.
Collapse
Affiliation(s)
- Michael J Waters
- Department of Materials Science and Engineering, Northwestern University, Evanston, IL 60208, United States of America
| | - James M Rondinelli
- Department of Materials Science and Engineering, Northwestern University, Evanston, IL 60208, United States of America
| |
Collapse
|
4
|
Luo F, Hong G, Wan Q. Artificial Intelligence in Biomedical Applications of Zirconia. FRONTIERS IN DENTAL MEDICINE 2021. [DOI: 10.3389/fdmed.2021.689288] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Artificial intelligence (AI) is rapidly developed based on computer technology, which can perform tasks that customarily require human intelligence by building intelligent software or machines. As a subfield of AI, machine learning (ML) can learn from the intrinsic statistical patterns and structures in data through algorithms to predict invisible data. With the increasing interest in aesthetics in dentistry, zirconia has drawn lots of attention due to its superior biocompatibility, aesthetically pleasing, high corrosion resistance, good mechanical properties, and absence of reported allergic reactions. The evolution of AI and ML led to the development of novel approaches for the biomedical applications of zirconia in dental devices. AI techniques in zirconia-related research and clinical applications have attracted much attention due to their ability to analyze data and reveal correlations between complex phenomena. The AI applications in the field of zirconia science change according to the application direction of zirconia. Therefore, in this article, we focused on AI in biomedical applications of zirconia in dental devices and AI in zirconia-related applications in dentistry.
Collapse
|
5
|
Affiliation(s)
- Jörg Behler
- Universität Göttingen, Institut für Physikalische Chemie, Theoretische Chemie, Tammannstraße 6, 37077 Göttingen, Germany
| |
Collapse
|
6
|
Lupo Pasini M, Li YW, Yin J, Zhang J, Barros K, Eisenbach M. Fast and stable deep-learning predictions of material properties for solid solution alloys. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2021; 33:084005. [PMID: 33202401 DOI: 10.1088/1361-648x/abcb10] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
We present a novel deep learning (DL) approach to produce highly accurate predictions of macroscopic physical properties of solid solution binary alloys and magnetic systems. The major idea is to make use of the correlations between different physical properties in alloy systems to improve the prediction accuracy of neural network (NN) models. We use multitasking NN models to simultaneously predict the total energy, charge density and magnetic moment. These physical properties mutually serve as constraints during the training of the multitasking NN, resulting in more reliable DL models because multiple physics properties are correctly learned by a single model. Two binary alloys, copper-gold (CuAu) and iron-platinum (FePt), were studied. Our results show that once the multitasking NN's are trained, they can estimate the material properties for a specific configuration hundreds of times faster than first-principles density functional theory calculations while retaining comparable accuracy. We used a simple measure based on the root-mean-squared errors to quantify the quality of the NN models, and found that the inclusion of charge density and magnetic moment as physical constraints leads to more stable models that exhibit improved accuracy and reduced uncertainty for the energy predictions.
Collapse
Affiliation(s)
- Massimiliano Lupo Pasini
- Oak Ridge National Laboratory, Computational Sciences and Engineering Division, Oak Ridge, TN 37831, Unites States of America
| | - Ying Wai Li
- Los Alamos National Laboratory, Computer, Computational and Statistical Sciences Division, Los Alamos, NM 87545, Unites States of America
| | - Junqi Yin
- Oak Ridge National Laboratory, National Center for Computational Sciences, Oak Ridge, TN 37831, Unites States of America
| | - Jiaxin Zhang
- Oak Ridge National Laboratory, Computer Science and Mathematics Division, Oak Ridge, TN 37831, Unites States of America
| | - Kipton Barros
- Los Alamos National Laboratory, Theoretical Division and CNLS, Los Alamos, NM 87545, Unites States of America
| | - Markus Eisenbach
- Oak Ridge National Laboratory, National Center for Computational Sciences, Oak Ridge, TN 37831, Unites States of America
| |
Collapse
|
7
|
Chiriki S, Jindal S, Singh P, Bulusu SS. Correlation of structure with UV-visible spectra by varying SH composition in Au-SH nanoclusters. J Chem Phys 2018; 149:074307. [DOI: 10.1063/1.5031478] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
Affiliation(s)
- Siva Chiriki
- Discipline of Chemistry, Indian Institute of Technology (IIT) Indore, Indore, Madhya Pradesh 453552, India
| | - Shweta Jindal
- Discipline of Chemistry, Indian Institute of Technology (IIT) Indore, Indore, Madhya Pradesh 453552, India
| | - Priya Singh
- Discipline of Chemistry, Indian Institute of Technology (IIT) Indore, Indore, Madhya Pradesh 453552, India
| | - Satya S. Bulusu
- Discipline of Chemistry, Indian Institute of Technology (IIT) Indore, Indore, Madhya Pradesh 453552, India
| |
Collapse
|