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Mukherjee S, Nazemi M, Jonkers I, Geris L. Use of Computational Modeling to Study Joint Degeneration: A Review. Front Bioeng Biotechnol 2020; 8:93. [PMID: 32185167 PMCID: PMC7058554 DOI: 10.3389/fbioe.2020.00093] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Accepted: 01/31/2020] [Indexed: 12/13/2022] Open
Abstract
Osteoarthritis (OA), a degenerative joint disease, is the most common chronic condition of the joints, which cannot be prevented effectively. Computational modeling of joint degradation allows to estimate the patient-specific progression of OA, which can aid clinicians to estimate the most suitable time window for surgical intervention in osteoarthritic patients. This paper gives an overview of the different approaches used to model different aspects of joint degeneration, thereby focusing mostly on the knee joint. The paper starts by discussing how OA affects the different components of the joint and how these are accounted for in the models. Subsequently, it discusses the different modeling approaches that can be used to answer questions related to OA etiology, progression and treatment. These models are ordered based on their underlying assumptions and technologies: musculoskeletal models, Finite Element models, (gene) regulatory models, multiscale models and data-driven models (artificial intelligence/machine learning). Finally, it is concluded that in the future, efforts should be made to integrate the different modeling techniques into a more robust computational framework that should not only be efficient to predict OA progression but also easily allow a patient’s individualized risk assessment as screening tool for use in clinical practice.
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Affiliation(s)
- Satanik Mukherjee
- Prometheus, Division of Skeletal Tissue Engineering, KU Leuven, Leuven, Belgium.,Biomechanics Section, KU Leuven, Leuven, Belgium
| | - Majid Nazemi
- GIGA in silico Medicine, University of Liège, Liège, Belgium
| | - Ilse Jonkers
- Human Movement Biomechanics Research Group, Department of Movement Sciences, KU Leuven, Leuven, Belgium
| | - Liesbet Geris
- Prometheus, Division of Skeletal Tissue Engineering, KU Leuven, Leuven, Belgium.,Biomechanics Section, KU Leuven, Leuven, Belgium.,GIGA in silico Medicine, University of Liège, Liège, Belgium
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Halloran JP, Sibole SC, Erdemir A. The potential for intercellular mechanical interaction: simulations of single chondrocyte versus anatomically based distribution. Biomech Model Mechanobiol 2017; 17:159-168. [PMID: 28836010 DOI: 10.1007/s10237-017-0951-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Accepted: 08/04/2017] [Indexed: 10/19/2022]
Abstract
Computational studies of chondrocyte mechanics, and cell mechanics in general, have typically been performed using single cell models embedded in an extracellular matrix construct. The assumption of a single cell microstructural model may not capture intercellular interactions or accurately reflect the macroscale mechanics of cartilage when higher cell concentrations are considered, as may be the case in many instances. Hence, the goal of this study was to compare cell-level response of single and eleven cell biphasic finite element models, where the latter provided an anatomically based cellular distribution representative of the actual number of cells for a commonly used [Formula: see text] edge cubic representative volume in the middle zone of cartilage. Single cell representations incorporated a centered single cell model and eleven location-corrected single cell models, the latter to delineate the role of cell placement in the representative volume element. A stress relaxation test at 10% compressive strain was adopted for all simulations. During transient response, volume- averaged chondrocyte mechanics demonstrated marked differences (up to 60% and typically greater than 10%) for the centered single versus the eleven cell models, yet steady-state loading was similar. Cell location played a marked role, due to inhomogeneity of the displacement and fluid pressure fields at the macroscopic scale. When the single cell representation was corrected for cell location, the transient response was consistent, while steady-state differences on the order of 1-4% were realized, which may be attributed to intercellular mechanical interactions. Anatomical representations of the superficial and deep zones, where cells reside in close proximity, may exhibit greater intercellular interactions, but these have yet to be explored.
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Affiliation(s)
- Jason P Halloran
- Department of Mechanical Engineering and the Mechanics and Control of Living Systems Lab, Cleveland State University, Cleveland, OH, USA.
| | - Scott C Sibole
- Human Performance Lab, Department of Biomedical Engineering, University of Calgary, Calgary, AB, Canada
| | - Ahmet Erdemir
- Computational Biomodeling (CoBi) Core and the Department of Biomedical Engineering, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA
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A multiscale modeling framework for studying the mechanobiology of sarcopenic obesity. Biomech Model Mechanobiol 2016; 16:275-295. [DOI: 10.1007/s10237-016-0816-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2016] [Accepted: 08/08/2016] [Indexed: 01/08/2023]
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Erdemir A, Bennetts C, Davis S, Reddy A, Sibole S. Multiscale cartilage biomechanics: technical challenges in realizing a high-throughput modelling and simulation workflow. Interface Focus 2015; 5:20140081. [PMID: 25844153 DOI: 10.1098/rsfs.2014.0081] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
Abstract
Understanding the mechanical environment of articular cartilage and chondrocytes is of the utmost importance in evaluating tissue damage which is often related to failure of the fibre architecture and mechanical injury to the cells. This knowledge also has significant implications for understanding the mechanobiological response in healthy and diseased cartilage and can drive the development of intervention strategies, ranging from the design of tissue-engineered constructs to the establishment of rehabilitation protocols. Spanning multiple spatial scales, a wide range of biomechanical factors dictate this mechanical environment. Computational modelling and simulation provide descriptive and predictive tools to identify multiscale interactions, and can lead towards a greater comprehension of healthy and diseased cartilage function, possibly in an individualized manner. Cartilage and chondrocyte mechanics can be examined in silico, through post-processing or feed-forward approaches. First, joint-tissue level simulations, typically using the finite-element method, solve boundary value problems representing the joint articulation and underlying tissue, which can differentiate the role of compartmental joint loading in cartilage contact mechanics and macroscale cartilage field mechanics. Subsequently, tissue-cell scale simulations, driven by the macroscale cartilage mechanical field information, can predict chondrocyte deformation metrics along with the mechanics of the surrounding pericellular and extracellular matrices. A high-throughput modelling and simulation framework is necessary to develop models representative of regional and population-wide variations in cartilage and chondrocyte anatomy and mechanical properties, and to conduct large-scale analysis accommodating a multitude of loading scenarios. However, realization of such a framework is a daunting task, with technical difficulties hindering the processes of model development, scale coupling, simulation and interpretation of the results. This study aims to summarize various strategies to address the technical challenges of post-processing-based simulations of cartilage and chondrocyte mechanics with the ultimate goal of establishing the foundations of a high-throughput multiscale analysis framework. At the joint-tissue scale, rapid development of regional models of articular contact is possible by automating the process of generating parametric representations of cartilage boundaries and depth-dependent zonal delineation with associated constitutive relationships. At the tissue-cell scale, models descriptive of multicellular and fibrillar architecture of cartilage zones can also be generated in an automated fashion. Through post-processing, scripts can extract biphasic mechanical metrics at a desired point in the cartilage to assign loading and boundary conditions to models at the lower spatial scale of cells. Cell deformation metrics can be extracted from simulation results to provide a simplified description of individual chondrocyte responses. Simulations at the tissue-cell scale can be parallelized owing to the loosely coupled nature of the feed-forward approach. Verification studies illustrated the necessity of a second-order data passing scheme between scales and evaluated the role that the microscale representative volume size plays in appropriately predicting the mechanical response of the chondrocytes. The tools summarized in this study collectively provide a framework for high-throughput exploration of cartilage biomechanics, which includes minimally supervised model generation, and prediction of multiscale biomechanical metrics across a range of spatial scales, from joint regions and cartilage zones, down to that of the chondrocytes.
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Affiliation(s)
- Ahmet Erdemir
- Computational Biomodeling (CoBi) Core , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA ; Department of Biomedical Engineering , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA
| | - Craig Bennetts
- Computational Biomodeling (CoBi) Core , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA ; Department of Biomedical Engineering , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA
| | - Sean Davis
- Computational Biomodeling (CoBi) Core , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA ; Department of Biomedical Engineering , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA ; Department of Mechanical Engineering , University of Akron , Akron, OH 44325 , USA
| | - Akhil Reddy
- Computational Biomodeling (CoBi) Core , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA ; Department of Biomedical Engineering , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA ; Weill Cornell Medical College , New York, NY 10065 , USA
| | - Scott Sibole
- Computational Biomodeling (CoBi) Core , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA ; Department of Biomedical Engineering , Lerner Research Institute, Cleveland Clinic , Cleveland, OH 44195 , USA ; Human Performance Laboratory, Faculty of Kinesiology , University of Calgary , Calgary, Alberta , Canada T2N 1N4
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Tanska P, Mononen ME, Korhonen RK. A multi-scale finite element model for investigation of chondrocyte mechanics in normal and medial meniscectomy human knee joint during walking. J Biomech 2015; 48:1397-406. [PMID: 25795269 DOI: 10.1016/j.jbiomech.2015.02.043] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2015] [Accepted: 02/17/2015] [Indexed: 10/23/2022]
Abstract
Mechanical signals experienced by chondrocytes (articular cartilage cells) modulate cell synthesis and cartilage health. Multi-scale modeling can be used to study how forces are transferred from joint surfaces through tissues to chondrocytes. Therefore, estimation of chondrocyte behavior during certain physical activities, such as walking, could provide information about how cells respond to normal and abnormal loading in joints. In this study, a 3D multi-scale model was developed for evaluating chondrocyte and surrounding peri- and extracellular matrix responses during gait loading within healthy and medial meniscectomy knee joints. The knee joint geometry was based on MRI, whereas the input used for gait loading was obtained from the literature. Femoral and tibial cartilages were modeled as fibril-reinforced poroviscoelastic materials, whereas menisci were considered as transversely isotropic. Fluid pressures in the chondrocyte and cartilage tissue increased up to 2MPa (an increase of 30%) in the meniscectomy joint compared to the normal, healthy joint. The elevated level of fluid pressure was observed during the entire stance phase of gait. A medial meniscectomy caused substantially larger (up to 60%) changes in maximum principal strains in the chondrocyte compared to those in the peri- or extracellular matrices. Chondrocyte volume or morphology did not change substantially due to a medial meniscectomy. Current findings suggest that during walking chondrocyte deformations are not substantially altered due to a medial meniscectomy, while abnormal joint loading exposes chondrocytes to elevated levels of fluid pressure and maximum principal strains (compared to strains in the peri- or extracellular matrices). These might contribute to cell viability and the onset of osteoarthritis.
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Affiliation(s)
- Petri Tanska
- Department of Applied Physics, University of Eastern Finland, Kuopio, Finland; Diagnostic Imaging Centre, Kuopio University Hospital, Kuopio, Finland.
| | - Mika E Mononen
- Department of Applied Physics, University of Eastern Finland, Kuopio, Finland
| | - Rami K Korhonen
- Department of Applied Physics, University of Eastern Finland, Kuopio, Finland; Diagnostic Imaging Centre, Kuopio University Hospital, Kuopio, Finland
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Bennetts CJ, Sibole S, Erdemir A. Automated generation of tissue-specific three-dimensional finite element meshes containing ellipsoidal cellular inclusions. Comput Methods Biomech Biomed Engin 2014; 18:1293-304. [PMID: 24708340 DOI: 10.1080/10255842.2014.900545] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
Finite element analysis provides a means of describing cellular mechanics in tissue, which can be useful in understanding and predicting physiological and pathological changes. Many prior studies have been limited to simulations of models containing single cells, which may not accurately describe the influence of mechanical interactions between cells. It is desirable to generate models that more accurately reflect the cellular organisation in tissue in order to evaluate the mechanical function of cells. However, as the model geometry becomes more complicated, manual model generation can become laborious. This can be prohibitive if a large number of distinct cell-scale models are required, for example, in multiscale modelling or probabilistic analysis. Therefore, a method was developed to automatically generate tissue-specific cellular models of arbitrary complexity, with minimal user intervention. This was achieved through a set of scripts, which are capable of generating both sample-specific models, with explicitly defined geometry, and tissue-specific models, with geometry derived implicitly from normal statistical distributions. Models are meshed with tetrahedral (TET) elements of variable size to sufficiently discretise model geometries at different spatial scales while reducing model complexity. The ability of TET meshes to appropriately simulate the biphasic mechanical response of a single-cell model is established against that of a corresponding hexahedral mesh for an illustrative use case. To further demonstrate the flexibility of this tool, an explicit model was developed from three-dimensional confocal laser scanning image data, and a set of models were generated from a statistical cellular distribution of the articular femoral cartilage. The tools presented herein are free and openly accessible to the community at large.
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Affiliation(s)
- Craig J Bennetts
- a Computational Biomodeling (CoBi) Core, Department of Biomedical Engineering , Lerner Research Institute , Cleveland Clinic, Cleveland , OH 44195 , USA
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Sibole SC, Maas S, Halloran JP, Weiss JA, Erdemir A. Evaluation of a post-processing approach for multiscale analysis of biphasic mechanics of chondrocytes, DOI: 10.1080/10255842.2013.809711. Comput Methods Biomech Biomed Engin 2014; 19:ii. [PMID: 24383709 DOI: 10.1080/10255842.2013.869043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Scott C Sibole
- a Computational Biomodeling (CoBi) Core, Lerner Research Institute, Cleveland Clinic , Cleveland , OH , USA.,b Department of Biomedical Engineering , Lerner Research Institute, Cleveland Clinic , Cleveland , OH , USA
| | - Steve Maas
- c Department of Bioengineering , University of Utah , Salt Lake City , UT , USA.,d Scientific Computing and Imaging Institute, University of Utah , Salt Lake City , UT , USA
| | - Jason P Halloran
- a Computational Biomodeling (CoBi) Core, Lerner Research Institute, Cleveland Clinic , Cleveland , OH , USA.,b Department of Biomedical Engineering , Lerner Research Institute, Cleveland Clinic , Cleveland , OH , USA
| | - Jeffrey A Weiss
- c Department of Bioengineering , University of Utah , Salt Lake City , UT , USA.,d Scientific Computing and Imaging Institute, University of Utah , Salt Lake City , UT , USA.,e Department of Orthopaedics , University of Utah , Salt Lake City , UT , USA
| | - Ahmet Erdemir
- a Computational Biomodeling (CoBi) Core, Lerner Research Institute, Cleveland Clinic , Cleveland , OH , USA.,b Department of Biomedical Engineering , Lerner Research Institute, Cleveland Clinic , Cleveland , OH , USA
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