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García ÁL, Ochoa-Terán A, Tirado-Guízar A, Jara-Cortés J, Pina-Luis G, Ortega HS, Labastida-Galván V, Ordoñez M, Peón J. Experimental and theoretical study of novel aminobenzamide–aminonaphthalimide fluorescent dyads with a FRET mechanism. RSC Adv 2022; 12:6192-6204. [PMID: 35424564 PMCID: PMC8982013 DOI: 10.1039/d1ra09278b] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 02/15/2022] [Indexed: 01/02/2023] Open
Abstract
In this work, both experimental and theoretical methods were used to study the photophysical and metal ion binding properties of a series of new aminobenzamide–aminonaphthalimide (2ABZ–ANAPIM) fluorescent dyads. The 2-aminobenzamide (2ABZ) and 6-aminonaphthalimide (ANAPIM) fluorophores were linked through alkyl chains (C2 to C6) to obtain four fluorescent dyads. These dyads present a highly efficient (0.61 to 0.98) Förster Resonant Energy Transfer (FRET) from the 2ABZ to the ANAPIM due to the 2ABZ emission and ANAPIM excitation band overlap and the configurational stacking of both aromatic systems which allows the energy transfer. These dyads interact with Cu2+ and Hg2+ metal ions in solution inhibiting the FRET mechanism by the cooperative coordination of both 2ABZ and ANAPIM moieties. Both experimental and theoretical results are consistent and describe clearly the photophysical and coordination properties of these new dyads. The aminobenzamide–aminonaphthalimide fluorescent dyads allow the determination of Cu2+ and Hg2+ metal ion concentration from Förster Resonant Energy Transfer measurements.![]()
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Affiliation(s)
- Ángel L. García
- Centro de Graduados e Investigación en Química, Tecnológico Nacional de México/IT de Tijuana, Tijuana, Baja California, Mexico
| | - Adrián Ochoa-Terán
- Centro de Graduados e Investigación en Química, Tecnológico Nacional de México/IT de Tijuana, Tijuana, Baja California, Mexico
| | - Antonio Tirado-Guízar
- Centro de Graduados e Investigación en Química, Tecnológico Nacional de México/IT de Tijuana, Tijuana, Baja California, Mexico
| | - Jesús Jara-Cortés
- Unidad Académica de Ciencias Básicas e Ingenierías, Universidad Autónoma de Nayarit, Tepic, Nayarit, Mexico
| | - Georgina Pina-Luis
- Centro de Graduados e Investigación en Química, Tecnológico Nacional de México/IT de Tijuana, Tijuana, Baja California, Mexico
| | - Hisila Santacruz Ortega
- Departamento de Investigación en Polímeros y Materiales, Universidad de Sonora, Hermosillo, Sonora, Mexico
| | - Victoria Labastida-Galván
- Centro de Investigaciones Químicas-(IICBA), Universidad Autónoma del Estado de Morelos, Cuernavaca, Morelos, Mexico
| | - Mario Ordoñez
- Centro de Investigaciones Químicas-(IICBA), Universidad Autónoma del Estado de Morelos, Cuernavaca, Morelos, Mexico
| | - Jorge Peón
- Instituto de Química, Universidad Nacional Autónoma de México, Ciudad de México, Mexico
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Claudio-Catalán MÁ, Medrano F, Tlahuext H, Rodríguez-Uribe NA, Godoy-Alcántar C. Interaction of aromatic compounds and anions with naphthylimide-dansylamide fluorescent dyad: Experimental evidence of aryl C-H…π and aryl C-H…anion contacts and DFT calculations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 226:117553. [PMID: 31634713 DOI: 10.1016/j.saa.2019.117553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2019] [Revised: 09/02/2019] [Accepted: 09/18/2019] [Indexed: 06/10/2023]
Abstract
In this work the interaction of halide anions and simple aromatic compounds with a bichromophoric fluorescent dyad derived from 1,8-naphthalimide (NAPIM) and 5-(dimethylamino)naphthalene-1-sulfonyl (DANS) was studied using electronic spectroscopy, 1H, and 19F NMR spectroscopy and quantum chemistry modeling (b3lyp/def2-TZVP). The NAPIM-DANS dyad interacts with electron-rich guests with binding constants in the range of 6×103 to 8×103M-1 in CHCl3. The formed complexes are stabilized through aryl C-H … anion and aryl C-H … π interactions.
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Affiliation(s)
- Miguel Ángel Claudio-Catalán
- Departamento de Ciencias Químico-Biológicas, Instituto de Ciencias Biomédicas, Universidad Autónoma de Ciudad Juárez, Avenida Plutarco Elías Calles, 1210, Fovissste Chamizal, Ciudad Juárez, Chihuahua, Mexico
| | - Felipe Medrano
- Departamento de Ciencias Químico-Biológicas, Universidad de Sonora, Rosales y Luis Encinas s/n, Hermosillo, Sonora, 83000, Mexico
| | - Hugo Tlahuext
- Centro de Investigaciones Químicas, IICBA, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos, 62209, Mexico
| | - Nadia Alejandra Rodríguez-Uribe
- Centro de Investigaciones Químicas, IICBA, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos, 62209, Mexico
| | - Carolina Godoy-Alcántar
- Centro de Investigaciones Químicas, IICBA, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos, 62209, Mexico.
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Lopéz-Martínez LM, García-Elías J, Ochoa-Terán A, Ortega HS, Ochoa-Lara K, Montaño-Medina CU, Yatsimirsky AK, Ramírez JZ, Labastida-Galván V, Ordoñez M. Synthesis, characterization and anion recognition studies of new fluorescent alkyl bis(naphthylureylbenzamide)-based receptors. Tetrahedron 2020. [DOI: 10.1016/j.tet.2019.130815] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Shen S, Chen W, Dong L, Yang Q, Lu H, Zhang J. Design and synthesis of naphthalimide group-bearing thioglycosides as novel β-N-acetylhexosaminidases inhibitors. J Enzyme Inhib Med Chem 2018; 33:445-452. [PMID: 29390898 PMCID: PMC6009855 DOI: 10.1080/14756366.2017.1419217] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
GH20 human β-N-acetylhexosaminidases (hsHex) and GH84 human O-GlcNAcase (hOGA) are involved in numerous pathological processes and emerged as promising targets for drug discovery. Based on the catalytic mechanism and structure of the catalytic domains of these β-N-acetylhexosaminidases, a series of novel naphthalimide moiety-bearing thioglycosides with different flexible linkers were designed, and their inhibitory potency against hsHexB and hOGA was evaluated. The strongest potency was found for compound 15j (Ki = 0.91 µM against hsHexB; Ki > 100 µM against hOGA) and compound 15b (Ki = 3.76 µM against hOGA; Ki = 30.42 µM against hsHexB), which also exhibited significant selectivity between these two enzymes. Besides, inhibitors 15j and 15b exhibited an inverse binding patterns in docking studies. The determined structure–activity relationship as well as the established binding models provide the direction for further structure optimizations and the development of specific β-N-acetylhexosaminidase inhibitors.
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Affiliation(s)
- Shengqiang Shen
- a Department of Applied Chemistry , College of Science, China Agricultural University , Beijing , China
| | - Wei Chen
- b School of Life Science and Biotechnology , Dalian University of Technology , Dalian , China
| | - Lili Dong
- a Department of Applied Chemistry , College of Science, China Agricultural University , Beijing , China
| | - Qing Yang
- b School of Life Science and Biotechnology , Dalian University of Technology , Dalian , China
| | - Huizhe Lu
- a Department of Applied Chemistry , College of Science, China Agricultural University , Beijing , China
| | - Jianjun Zhang
- a Department of Applied Chemistry , College of Science, China Agricultural University , Beijing , China
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Chen W, Shen S, Dong L, Zhang J, Yang Q. Selective inhibition of β-N-acetylhexosaminidases by thioglycosyl–naphthalimide hybrid molecules. Bioorg Med Chem 2018; 26:394-400. [DOI: 10.1016/j.bmc.2017.11.042] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2017] [Revised: 11/18/2017] [Accepted: 11/28/2017] [Indexed: 01/11/2023]
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Szakács Z, Rousseva S, Bojtár M, Hessz D, Bitter I, Kállay M, Hilbers M, Zhang H, Kubinyi M. Experimental evidence of TICT state in 4-piperidinyl-1,8-naphthalimide – a kinetic and mechanistic study. Phys Chem Chem Phys 2018; 20:10155-10164. [DOI: 10.1039/c7cp08555a] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The excited state processes in N-propyl-4-piperidinyl-1,8-naphthalimide have been studied by measuring its fluorescence spectra and decay curves in solvents of different polarity and viscosity and also in a frozen solvent glass.
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Affiliation(s)
- Zoltán Szakács
- Department of Physical Chemistry and Materials Science
- Budapest University of Technology and Economics
- 1521 Budapest
- Hungary
| | - Sylvia Rousseva
- Department of Physical Chemistry and Materials Science
- Budapest University of Technology and Economics
- 1521 Budapest
- Hungary
| | - Márton Bojtár
- Department of Organic Chemistry and Technology
- Budapest University of Technology and Economics
- 1521 Budapest
- Hungary
| | - Dóra Hessz
- Institute of Materials and Environmental Chemistry
- Research Center for Natural Sciences
- Hungarian Academy of Sciences
- 1519 Budapest
- Hungary
| | - István Bitter
- Department of Organic Chemistry and Technology
- Budapest University of Technology and Economics
- 1521 Budapest
- Hungary
| | - Mihály Kállay
- MTA-BME Lendület Quantum Chemistry Research Group
- Department of Physical Chemistry and Materials Science
- Budapest University of Technology and Economics
- 1521 Budapest
- Hungary
| | - Michiel Hilbers
- Van't Hoff Institute for Molecular Sciences
- University of Amsterdam
- 1090 GD Amsterdam
- The Netherlands
| | - Hong Zhang
- Van't Hoff Institute for Molecular Sciences
- University of Amsterdam
- 1090 GD Amsterdam
- The Netherlands
| | - Miklós Kubinyi
- Department of Physical Chemistry and Materials Science
- Budapest University of Technology and Economics
- 1521 Budapest
- Hungary
- Institute of Materials and Environmental Chemistry
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Singharoy D, Chowdhury S, Mati SS, Ghosh S, Chattopadhyay K, Bhattacharya SC. Photoinduced Electron Transfer Switching Mechanism of a Naphthalimide Derivative with its Solvatochromic Behaviour: An Experimental and Theoretical Study with In Cell Investigations. Chemistry 2017; 23:16516-16524. [PMID: 28815775 DOI: 10.1002/chem.201702414] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2017] [Indexed: 11/06/2022]
Abstract
The sole existence of a t-bone-shaped naphthalimide derivative [2-(2-aminoethyl)-1H-benzo[de]isoquinoline-1,3(2H)dione] (NAP), which gives rise to a photoinduced electron transfer (PET) mechanism, has been established using a combination of experimental and theoretical studies. In parallel an in vitro-in cell PET mechanism has also been shown. To understand the photophysics of NAP, solvent studies have been carried out in different solvents. In addition, theoretical calculations have been conducted to explain the spectroscopic properties through optimized structures. A "turn off" PET mechanism has also been observed in the presence of specific metal ions, namely, Cr3+ , Fe3+ and Hg2+ among a series of metal ions. Theoretical studies reveal that NAP-Cr3+ , NAP-Fe3+ and NAP-Hg2+ have their HOMO energy states lying in between a HOMO-LUMO energy state of the t-bone-type NAP molecule. On the contrary, the HOMO state of the other metal ion-NAP conjugate (NAP-Mn+ ) does not lie in between the HOMO-LUMO energy gap of the t-bone-type NAP molecule. Coupled with in vitro studies, in cell investigations reveal an enhancement of fluorescence intensity of NAP upon cytosolic metal sensing. Furthermore, a very high cell viability of NAP treated cells as tested by MTT assay and a fast permeation of the said compound as revealed by flow cytometry suggest NAP to be a potential candidate in metal sensing and bioimaging applications.
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Affiliation(s)
- Dipti Singharoy
- Department of Chemistry, Jadavpur University, Kolkata, 700032, India
| | - Sourav Chowdhury
- CSIR-Indian Institute of Chemical Biology (IICB), Kolkata, 700032, India
| | - Soumya Sundar Mati
- Government General Degree College, Keshiary, Paschim Medinipur, 721135, India
| | - Swadesh Ghosh
- Department of Chemistry, Jadavpur University, Kolkata, 700032, India
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Claudio-Catalán MÁ, Medrano F, Tlahuext H, Godoy-Alcántar C. Crystal structure of N, N'-bis[2-((benzyl){[5-(di-methyl-amino)naph-tha-len-1-yl]sulfonyl}amino)ethyl]naphthalene-1,8:4,5-tetracarboximide 1,2-di-chloro-benzene tris-olvate. Acta Crystallogr E Crystallogr Commun 2016; 72:1503-1508. [PMID: 27746951 PMCID: PMC5050786 DOI: 10.1107/s2056989016015188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2016] [Accepted: 09/26/2016] [Indexed: 11/10/2022]
Abstract
The asymmetric unit of the title compound, C56H50N6O8S2·3C6H4Cl2, contains two half-mol-ecules of the parent, A and B, which both have crystallographic inversion symmetry, together with three 2,3-di-chloro-benzene mol-ecules of solvation. Mol-ecules A and B are conformationally similar, with dihedral angles between the central naphthalenedi-imide ring and the peripheral naphthalene and benzyl rings of 2.43 (7), 81.87 (7)° (A) and 3.95 (7), 84.88 (7)° (B), respectively. The conformations are stabilized by the presence of intra-molecular π-π inter-actions between the naphthalene ring and the six-membered di-imide ring of the central naphthalenedi-imide moiety, with ring centroid-to-centroid distances of 3.5795 (8) Å (A) and 3.5640 (8) Å (B). In the crystal, C-H⋯O hydrogen bonds link the mol-ecules into infinite supra-molecular chains along the c axis. These chains are inter-connected through C-H⋯π and offset π-π inter-actions, generating supra-molecular nanotubes which are filled by 1,2-di-chloro-benzene mol-ecules.
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Affiliation(s)
- Miguel Ángel Claudio-Catalán
- Centro de Investigaciones Químicas IICBA. Universidad Autónoma del Estado de, Morelos, Av. Universidad No. 1001, Col., Chamilpa, C. P. 62209, Cuernavaca Mor., México
| | - Felipe Medrano
- Centro de Investigaciones Químicas IICBA. Universidad Autónoma del Estado de, Morelos, Av. Universidad No. 1001, Col., Chamilpa, C. P. 62209, Cuernavaca Mor., México
| | - Hugo Tlahuext
- Centro de Investigaciones Químicas IICBA. Universidad Autónoma del Estado de, Morelos, Av. Universidad No. 1001, Col., Chamilpa, C. P. 62209, Cuernavaca Mor., México
| | - Carolina Godoy-Alcántar
- Centro de Investigaciones Químicas IICBA. Universidad Autónoma del Estado de, Morelos, Av. Universidad No. 1001, Col., Chamilpa, C. P. 62209, Cuernavaca Mor., México
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