Mitogenome analysis of a green tide forming Ulva from California, USA confirms its identity as Ulva expansa (Ulvaceae, Chlorophyta)

A bibliometric review of Green Tide research between 1995-2023

In recent years, the frequent occurrence of green tides has attracted attention from academia and industry. Despite some literature reviews, systematic bibliometric and visualization analyses are still lacking. The study employs CiteSpace and VOSviewer tools to conduct a bibliometric and visualization analysis of green tide-related literature from the Web of Science (1995 to 2023). The study identifies key countries, institutions, journals, disciplines, and authors, and maps out their collaborative networks. Co-citation analysis provides an initial overview of various aspects within the green tide field. Keyword analysis has reveals six core themes: remote sensing applications, eutrophication and green tides, phylogenetic analysis, the impact of climate change, green tide management and applications, and studies focused on green tides in the China Sea. Additionally, keyword burst analysis has revealed two emerging trends. This study provides a strategic framework for future research, serving as a navigational guide in the field of green tide studies.

Functionalization of seaweed bloom-derived Ulvan using response surface methodology with application in flocculation of oil-in-water pollution

Utilizing macroalgal waste biomass for pollution management is a highly efficient method for addressing the environmental difficulties associated with its disposal. To accomplish this, we have attempted to synthesize a graft copolymer by combining ulvan, a sulfated polysaccharide isolated from seaweed, with acrylates. A one-pot synthesis method using UV-initiated graft polymerization with V-50 as the photoinitiator resulted in the production of a distinctive, high-performance, and eco-friendly flocculant, Ulvan-g-Poly (acrylamide-co-acrylic acid) referred as P(U_AAm_AAc). The synthesis was optimized using the CCD-RSM approach, employing molecular weight and inherent viscosity as indicators to optimize the parameters. The structural and physio-chemical properties of the synthesized P(U_AAm_AAc) were characterized utilizing XRD, ATR-FTIR, ζ-potential, and H1 NMR spectroscopy. The flocculation performance of P(U_AAm_AAc) was further examined for the removal of oils from samples with high neem oil in urea solution and low crude oil in seawater. By employing a coagulant-flocculant combination of poly-aluminium chloride (PAC) and P(U_AAm_AAc), it was noted that more than 94% of oil was effectively eliminated in both samples. Optimization of the dosage of P(U_AAm_AAc) resulted in enhanced turbidity reduction and improved dewatering efficiency of the filter cake generated following flocculation. An evaluation of performance was conducted using the commercial flocculant APAM, where synthesized P(U_AAm_AAc) demonstrated similar results. In conclusion, the findings of this research highlight the potential of P(U_AAm_AAc) as a sustainable alternative to commercial flocculants with multifaceted solution to coastal waste management, paving the way for a cleaner and healthier marine ecosystem to mitigate oil emulsion pollution.

Biomass and species composition of green macroalgae in the Binhai Harbor intertidal zone of the Southern Yellow Sea

Green tides have occurred in the Southern Yellow Sea (SYS) for 16 consecutive years, causing widespread concern. Attached and floating green macroalgae have been observed in Binhai Harbor, Jiangsu Province, China, in the SYS. This study used morphological analysis, and internal transcribed spacers and rps2-trnL molecular identification methods, to analyze the species composition and biomass of green macroalgae along the Binhai Harbor coast. Six species of green tide algae (Ulva prolifera, Ulva meridionalis, Ulva linza, Ulva flexuosa, Ulva californica, and Ulva intestinalis) were identified, in addition to Blidingia sp. The discovery of U. californica is the first report of this species off the coast of Jiangsu Province. The floating green macroalgae along the Binhai Harbor coast originated from attached green macroalgae in Binhai Harbor, and a small number of the attached algae were closely related to the large-scale floating U. prolifera in the SYS. Moreover, in December 2021, February 2022, and April 2022, the total biomass of attached green macroalgae in Binhai Harbor was 25.600, 10.767, and 25.867 t, respectively, of which the U. prolifera biomass was 10.697, 8.709, and 4.185 t, respectively. This study proved Binhai Harbor may not be an important source of green tide in the SYS.

A Demonstration of DNA Barcoding-Based Identification of Blade-Form Ulva (Ulvophyceae, Chlorophyta) Species from Three Site in the San Juan Islands, Washington, USA

Marine macroalgae are foundation species that play a critical ecological role in coastal communities as primary producers. The macroalgal genus Ulva is vital in intertidal communities, serving as a food source and shelter for organisms, but these species also form environment-damaging nuisance blooms. This project aimed to demonstrate the utility of DNA barcoding for determining the diversity of Ulva species in the San Juan Islands (Washington, DC, USA). Blade-form Ulva (Ulvophyceae) specimens were collected from the lower, mid, and upper intertidal zones at three sites experiencing different levels of wave exposure. Sequences of plastid-encoded tufA were generated for each specimen and cluster analyses revealed the presence of four species at the collection sites. Two species were positively identified as Ulva expansa and Ulva fenestrata based on their sharing identical tufA sequences with those of the holotype specimens. Sequences of plastid-encoded rbcL and the nuclear-encoded ribosomal ITS regions of representative specimens were used to identify the other two species as Ulva prolifera and Ulva californica based on their similarity to epitype and topotype specimen sequences, respectively. Additional types of specimen sequencing efforts are needed to increase the number of Ulva species that can be accurately identified and realize their true biodiversity.

Ulva macroalgae within local aquaculture ponds along the estuary of Dagu River, Jiaozhou Bay, Qingdao

Green macroalgal blooms caused by Ulva species have influenced the Shandong Province for 15 consecutive years since 2007, leading to serious damage to the marine environment. Great biomasses of attached Ulva prolifera on Neopyropia aquaculture rafts in the Yellow Sea were considered as sources of blooms. However, it is still unclear whether U. prolifera could survive and settle in the Qingdao coastal environment, Shandong, thus leading to local Ulva blooms in the future. In this research, sampling of Ulva macroalgae in seven Portunus trituberculatus aquaculture ponds along the coast of Qingdao was conducted on August 21, 2019. In total, 24 samples collected from the ponds were analyzed through methods of molecular biological identification (ITS, 5S, and rps2-trnL sequences) and genetic analysis. All the aquaculture ponds contained large amounts of floating Ulva macroalgae, which consisted of three species: U. prolifera, Ulva meridionalis, and Ulva pertusa. Among these species, U. meridionalis, which is usually found in southern Japan, also causes the green tide. In addition, all Ulva macroalgae floated on the surfaces of aquaculture ponds, and were discarded into the local coastal area by aquaculturist. This research raised our awareness of the importance of controlling the spread of the green tide related macroalgae.

Exhaustive reanalysis of barcode sequences from public repositories highlights ongoing misidentifications and impacts taxa diversity and distribution

Accurate species identification often relies on public repositories to compare the barcode sequences of the investigated individual(s) with taxonomically assigned sequences. However, the accuracy of identifications in public repositories is often questionable, and the names originally given are rarely updated. For instance, species of the Sea Lettuce (Ulva spp.; Ulvophyceae, Ulvales, Ulvaceae) are frequently misidentified in public repositories, including herbaria and gene banks, making species identification based on traditional barcoding unreliable. We DNA barcoded 295 individual distromatic foliose strains of Ulva from the North-East Atlantic for three loci (rbcL, tufA, ITS1). Seven distinct species were found, and we compared our results with all worldwide Ulva spp. sequences present in the NCBI database for the three barcodes rbcL, tufA and the ITS1. Our results demonstrate a large degree of species misidentification, where we estimate that 24%-32% of the entries pertaining to foliose species are misannotated and provide an exhaustive list of NCBI sequences reannotations. An analysis of the global distribution of registered samples from foliose species also indicates possible geographical isolation for some species, and the absence of U. lactuca from Northern Europe. We extended our analytical framework to three other genera, Fucus, Porphyra and Pyropia and also identified erroneously labelled accessions and possibly new synonymies, albeit less than for Ulva spp. Altogether, exhaustive taxonomic clarification by aggregation of a library of barcode sequences highlights misannotations and delivers an improved representation of species diversity and distribution.

Diversity of the green macroalgal genus Ulva (Ulvophyceae, Chlorophyta) from the east and gulf coast of the United States based on molecular data

Ulva (Ulvophyceae, Chlorophyta) is common in intertidal environments and can also be found in freshwater ecosystems. The difficulty to morphologically identify Ulva species due to cryptic diversity and morphological plasticity has caused a taxonomic conundrum. Fortunately, molecular data have begun to unravel a better understanding of its diversity. Here, we present a molecular analysis with 247 samples of Ulva from the Gulf of Mexico and Atlantic USA based on chloroplast (rbcL and tufA) and nuclear (ITS1-5.8S-ITS2) molecular markers. Twenty-four Ulva taxa had previously been reported for this area based on morphology and earlier molecular studies mostly from Northeastern USA and Canada. In this study, sixteen Ulva clades were identified representing 13 named clades and putatively three undescribed species. Only nine of the 24 taxa previously reported for the Western Atlantic were confirmed. Four species were identified for the first time in the U.S. East and Gulf Coast (U. aragoënsis, U. californica, U. meridionalis, and U. tepida). This study provides a foundation for future research on Ulva in this area and reiterates the necessity of using molecular-assisted identifications for this group.

Foliose Ulva Species Show Considerable Inter-Specific Genetic Diversity, Low Intra-Specific Genetic Variation, and the Rare Occurrence of Inter-Specific Hybrids in the Wild

Foliose Ulva spp. have become increasingly important worldwide for their environmental and financial impacts. A large number of such Ulva species have rapid reproduction and proliferation habits, which explains why they are responsible for Ulva blooms, known as "green tides", having dramatic negative effects on coastal ecosystems, but also making them attractive for aquaculture applications. Despite the increasing interest in the genus Ulva, particularly on the larger foliose species for aquaculture, their inter- and intra-specific genetic diversity is still poorly described. We compared the cytoplasmic genome (chloroplast and mitochondrion) of 110 strains of large distromatic foliose Ulva from Ireland, Brittany (France), the Netherlands and Portugal. We found six different species, with high levels of inter-specific genetic diversity, despite highly similar or overlapping morphologies. Genetic variation was as high as 82 SNPs/kb between Ulva pseudorotundata and U. laetevirens, indicating considerable genetic diversity. On the other hand, intra-specific genetic diversity was relatively low, with only 36 variant sites (0.03 SNPs/kb) in the mitochondrial genome of the 29 Ulva rigida individuals found in this study, despite different geographical origins. The use of next-generation sequencing allowed for the detection of a single inter-species hybrid between two genetically closely related species, U. laetevirens, and U. rigida, among the 110 strains analyzed in this study. Altogether, this study represents an important advance in our understanding of Ulva biology and provides genetic information for genomic selection of large foliose strains in aquaculture.

Sargassum blooms in the East China Sea and Yellow Sea: Formation and management

Large-scale Sargassum blooms, known as golden tides, have been occurring along the coast of the Yellow Sea in recent years, resulting in an enormous loss of Pyropia yezoensis production. To locate the source of the blooms, we performed large-scale spatio-temporal sampling in the South Yellow Sea, East China Sea, and Jeju Island, South Korea. Based on morphology and molecular traits, the attached and floating Sargassum samples collected from the three regions were all identified as Sargassum horneri, although slight differences were observed in morphology among samples. Genetic distance and automatic barcode gap discovery analysis revealed very low genetic diversity among the three regions. The 33 samples from 12 sites were divided into six haplotypes, and the samples from the ECS shared more haplotypes than samples from other two regions. Our results suggested that S. horneri in the ECS was responsible for the formation of blooms in the Yellow Sea.

Genetic analysis of the Linnaean Ulva lactuca (Ulvales, Chlorophyta) holotype and related type specimens reveals name misapplications, unexpected origins, and new synonymies

Current usage of the name Ulva lactuca, the generitype of Ulva, remains uncertain. Genetic analyses were performed on the U. lactuca Linnaean holotype, the U. fasciata epitype, the U. fenestrata holotype, the U. lobata lectotype, and the U. stipitata lectotype. The U. lactuca holotype is nearly identical in rbcL sequence to the epitype of U. fasciata, a warm temperate to tropical species, rather than the cold temperate species to which the name U. lactuca has generally been applied. We hypothesize that the holotype specimen of U. lactuca came from the Indo-Pacific rather than northern Europe. Our analyses indicate that U. fasciata and U. lobata are heterotypic synonyms of U. lactuca. Ulva fenestrata is the earliest name for northern hemisphere, cold temperate Atlantic and Pacific species, with U. stipitata a junior synonym. DNA sequencing of type specimens provides an unequivocal method for applying names to Ulva species.