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Lin C, Fan J, Bai S. The mitochondrial genome sequence of Manchurian Hare ( Lepus mandshuricus). Mitochondrial DNA B Resour 2024; 9:1254-1257. [PMID: 39318402 PMCID: PMC11421130 DOI: 10.1080/23802359.2024.2405539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Accepted: 09/11/2024] [Indexed: 09/26/2024] Open
Abstract
The Manchurian hare (Lepus mandshuricus) is widely distributed in eastern Russia and northeastern China, but due to limited research, its taxonomic status remains somewhat ambiguous. The mitochondrial genome of the Manchurian hare was 16,705 bp in length, which was consisted of 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes and one control region. The overall nucleotide composition is 31.7% A, 29.4% T, 13.3% G, and 25.6% C, indicating a high AT content. Phylogenetic analysis reveals a closer relationship of the Manchurian hare with the Korean hare (Lepus coreanus) and the Iberian hare (Lepus granatensis), while its relationship with the Hainan rabbit (Lepus hainanus), European hare (Lepus europaeus) and the snowshoe hare (Lepus americanus) is more distant. The mitochondrial genome of the Manchurian hare is of vital importance for the phylogenetic analysis of lagomorphs and provides valuable data for deeper evolutionary inquiries.
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Affiliation(s)
- Chen Lin
- College of Wildlife and Protected Area, Northeast Forestry University, Harbin, China
| | - Jiale Fan
- College of Wildlife and Protected Area, Northeast Forestry University, Harbin, China
| | - Suying Bai
- College of Wildlife and Protected Area, Northeast Forestry University, Harbin, China
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Zhang X, Ma X, Ha J, Wei Y, Zhao Y, Wei S, Zhong X, Cai Z. Characterization of a complete mitochondrial genome of Turdus ruficollis (Passeriformes: Turdidae). MITOCHONDRIAL DNA PART B-RESOURCES 2021; 6:1623-1624. [PMID: 34027074 PMCID: PMC8128209 DOI: 10.1080/23802359.2021.1926359] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
Abstract
Turdus ruficollis is mainly found in China and Northeast Asia. So far, the mitochondrial genome of more than 20 species from the genus Turdus has been studied. However, the relevant information of T. ruficollis has not been reported. To grasp a better comprehension on the molecular basis of T. ruficollis, we obtained the complete mitochondrial DNA genome sequences of this species. The mitogenome was 16,737 bp in length, which consists of 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and one control region. A phylogenetic tree based on complete mitogenome sequences revealed that, within the genus Turdidae, T. ruficollis is closely related to T. naumanni and T. eumomus. The complete mitochondrial genome of T. ruficollis would be of great utility for population genetics and phylogeography of the Turdidae family and would also provide meritorious insights for future studies on conservation, genetics, and phylogeny of the Passeriformes family.
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Affiliation(s)
- Xuze Zhang
- College of Ecological Environment and Resources, Qinghai Nationalities University, Xining, China.,Institute of Ecological Environment, Qinghai Nationalities University, Xining, China.,Qinghai Provincial Key Laboratory of Animal Ecological Genomics, Xining, China.,Qinghai National Park Bird Watching Society, Xining, China
| | - Xiaodong Ma
- College of Ecological Environment and Resources, Qinghai Nationalities University, Xining, China
| | - Jinqiang Ha
- College of Ecological Environment and Resources, Qinghai Nationalities University, Xining, China
| | - Yingting Wei
- College of Ecological Environment and Resources, Qinghai Nationalities University, Xining, China
| | - Ying Zhao
- College of Ecological Environment and Resources, Qinghai Nationalities University, Xining, China
| | - Shengnan Wei
- College of Ecological Environment and Resources, Qinghai Nationalities University, Xining, China
| | - Xiaojie Zhong
- College of Ecological Environment and Resources, Qinghai Nationalities University, Xining, China
| | - Zhenyuan Cai
- Qinghai Provincial Key Laboratory of Animal Ecological Genomics, Xining, China.,Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, China
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