The late Pleistocene origin of the Italian and Maltese populations of Potamon fluviatile (Malacostraca: Decapoda): insights from an expanded sampling of molecular data

The Inland Water Copepod Fauna of a Traditional Rural Landscape in a Mediterranean Island (Crustacea, Copepoda)

Although the Mediterranean area is a well-known hotspot of biological diversity, the crustacean assemblages inhabiting inland waters of the Mediterranean islands are to date unevenly known, and detailed information is missing for most taxa and areas. In the frame of this paper, we provide a checklist and a characterization of the copepod fauna of the lentic water bodies occurring in a traditional rural landscape of Sicily, where the co-existence of agriculture, woodlands, and pastoral activities lead to the presence of a wide range of different aquatic habitats. Overall, 22 copepod species belonging to the orders Calanoida, Cyclopoida, and Harpacticoida have been found in the 92 surveyed sites, stressing the conservation value of the area. In the study area, species widespread in the west Palaearctic region co-exist with strictly Mediterranean elements and a small but biogeographically significant group of species with northern or Balkan affinities, which support the role of the investigated area as a refugium for species that colonised Sicily during Pleistocene climate fluctuations and are now restricted to the more wet parts of the island. A single non-native species has been found, and its distribution is currently limited to permanent, man-made reservoirs.

Diversity and Distribution of the Inland Water Decapods of Sicily (Crustacea, Malacostraca)

The current knowledge of Sicilian inland water decapod malacostracans is scarce and an updated synopsis on species distribution is lacking. Therefore, we reviewed the checklist and recent distribution of Sicilian inland water decapods based on published and unpublished records and novel observations with the aim of providing an exhaustive repository, also to be used as a sound baseline for future surveys. Overall, five native decapod species occur in the study area, i.e., the atyid shrimp Atyaephyra desmarestii, the palaemonid shrimps Palaemon adspersus, P. antennarius, and P. elegans, and the freshwater crab Potamon fluviatile, and their current local distributions are described. In addition, three alien species were recorded: the common yabby Cherax destructor and the red swamp crayfish Procambarus clarkii, strictly linked to inland waters, and the Atlantic blue crab Callinectes sapidus, a mainly marine species that can also colonise the lower stretches of rivers and coastal brackish waters. The collected data suggest the existence of a partial segregation of native versus non-native species, with the latter currently confined to coastal water bodies and the lower stretches of rivers. Moreover, the exclusively freshwater caridean A. desmarestii and P. antennarius show a parapatric distribution in the study area, which may suggest the existence of mutual exclusion phenomena. The results obtained raise some concerns about the effects of alien species on the native biota, and dedicated monitoring and management strategies should be implemented in order to better understand and mitigate their impact.

Genetic diversity and structure of the noble crayfish populations in the Balkan Peninsula revealed by mitochondrial and microsatellite DNA markers

Background

The noble crayfish (Astacus astacus) is a native European species in decline, with a contracting range and diminishing populations and abundance. Previous studies revealed this species significant genetic diversity in the south-eastern Europe, with populations from the western and the southern part of the Balkan Peninsula being the most divergent. However, sampling of populations from the western part of the Balkans was limited and insufficient for investigating genetic diversity and population divergence for the purpose of conservation planning and management. Thus, the major aim of this study was to fill in this knowledge gap by studying mitochondrial and microsatellite DNA diversity, using 413 noble crayfish from 18 populations from waterbodies in the western part of the Balkan Peninsula.

Methods

Phylogenetic analysis of studied populations and their mitochondrial diversity were studied using COI and 16S sequences and population genetic structure was described using 15 microsatellite loci.

Results

Phylogeographic analysis revealed new divergent mitochondrial haplotypes for the populations in the westernmost part of the Balkan Peninsula in the tributaries of the Sava and Drava rivers. Microsatellite data indicated that these populations harbour an important component of genetic diversity within A. astacus. The results suggest that the western part of the Balkans played an important role as microrefugia during the Pleistocene climate fluctuations, allowing the long term persistence of A. astacus populations in this region. These results will also be important to supporting conservation decision making and planning.

Stand out from the Crowd: Small-Scale Genetic Structuring in the Endemic Sicilian Pond Turtle

The geographical pattern of genetic diversity was investigated in the endemic Sicilian pond turtle Emys trinacris across its entire distribution range, using 16 microsatellite loci. Overall, 245 specimens of E. trinacris were studied, showing high polymorphic microsatellite loci, with allele numbers ranging from 7 to 30. STRUCTURE and GENELAND analyses showed a noteworthy, geographically based structuring of the studied populations in five well-characterized clusters, supported by a moderate degree of genetic diversity (FST values between 0.075 and 0.160). Possible explanations for the genetic fragmentation observed are provided, where both natural and human-mediated habitat fragmentation of the Sicilian wetlands played a major role in this process. Finally, some conservation and management suggestions aimed at preventing the loss of genetic variability of the species are briefly reported, stressing the importance of considering the five detected clusters as independent Management Units.