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Wang L, Wang W, Huang Z, Zhen S, Wang R. Discrimination of internal crack for rice seeds using near infrared spectroscopy. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 319:124578. [PMID: 38833887 DOI: 10.1016/j.saa.2024.124578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Revised: 04/16/2024] [Accepted: 05/30/2024] [Indexed: 06/06/2024]
Abstract
It is an important thing to identify internal crack in seeds from normal seeds for evaluating the quality of rice seeds (Oryza sativa L.). In this study, non-destructive discrimination of internal crack in rice seeds using near infrared spectroscopy and chemometrics is proposed. Principal component analysis (PCA) was used to analyze the rice seeds spectra. Four supervised classification techniques(partial least squares discriminate analysis (PLS-DA), support vector machines (SVM), k-nearest neighbors (KNN) and random forest (RF)) with four different pre-processing techniques (standard normal variate (SNV), multiplicative scatter correction (MSC), first and second derivative with Savitzky-Golay (SG) smoothing) were applied. The best results (Sn = 0.8824, Sp = 0.9429, Acc = 0.913) were achieved by PLS-DA with the raw spectral data. The performance of the best SVM model was inferior to that of PLS-DA, but superior to that of RF and KNN. Except for PLS-DA, four different preprocessing techniques were improved the performance of the developed models. The important variables for discriminating internal cracks in rice seeds were related to the amylose. Overall, the all results demonstrated the feasibility of non-destructive discrimination of internal crack for rice seeds (Oryza sativa L.) using near infrared spectroscopy and chemometrics.
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Affiliation(s)
- Liusan Wang
- Institute of Intelligent Machines, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei 230031, China.
| | - Weisheng Wang
- Institute of Nuclear Energy Safety Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei 230031, China; University of Science and Technology of China, Hefei 230026, China
| | - Ziliang Huang
- Institute of Intelligent Machines, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei 230031, China; University of Science and Technology of China, Hefei 230026, China
| | - Shijian Zhen
- Southwest University of Science and Technology, Mianyang 621010, China
| | - Rujing Wang
- Institute of Intelligent Machines, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei 230031, China; University of Science and Technology of China, Hefei 230026, China
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Hwang JH, Kim SH, Yoon S, Jung S, Kim DH, Lee WH. Evaluation of Spatial Distribution of Three Major Leptocorisa (Hemiptera: Alydidae) Pests Using MaxEnt Model. INSECTS 2022; 13:750. [PMID: 36005375 PMCID: PMC9409444 DOI: 10.3390/insects13080750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 08/09/2022] [Accepted: 08/17/2022] [Indexed: 06/15/2023]
Abstract
We targeted three major Leptocorisa species (L. chinensis, L. acuta, and L. oratoria) and evaluated their potential distributions using MaxEnt. The results showed that most Asian countries and northern Australia would be suitable for at least one of these pest species, and climate change will expand their habitat northward. All of the developed models were evaluated to be excellent with AUC, TSS, and OR10%. Most of the recorded regions of the Leptocorisa species are consistent with the result of potential distributions predicted in this study. The results confirmed that the minimum temperature of the coldest month mainly influences the three Leptocorisa species distributions. The potential distributions of the three species cover major rice cultivation areas regardless of climate change, suggesting that it would be necessary to establish a sustainable control strategy for the pests.
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Affiliation(s)
- Jeong Ho Hwang
- Natural History Division, National Science Museum, Daejeon 34143, Korea
- Department of Smart Agriculture Systems, Chungnam National University, Daejeon 34134, Korea
| | - Se-Hyun Kim
- Department of Smart Agriculture Systems, Chungnam National University, Daejeon 34134, Korea
| | - Sunhee Yoon
- Department of Smart Agriculture Systems, Chungnam National University, Daejeon 34134, Korea
| | - Sunghoon Jung
- Department of Smart Agriculture Systems, Chungnam National University, Daejeon 34134, Korea
- Department of Applied Biology, Chungnam National University, Daejeon 34134, Korea
| | - Dong Hee Kim
- Natural History Division, National Science Museum, Daejeon 34143, Korea
| | - Wang-Hee Lee
- Department of Smart Agriculture Systems, Chungnam National University, Daejeon 34134, Korea
- Department of Biosystems Machinery Engineering, Chungnam National University, Daejeon 34134, Korea
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Cappelli GA, Bregaglio S. Model‐based evaluation of climate change impacts on rice grain quality in the main European rice district. Food Energy Secur 2021. [DOI: 10.1002/fes3.307] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
Affiliation(s)
- Giovanni Alessandro Cappelli
- CREA – Council for Agricultural Research and Economics Research Centre for Agriculture and Environment Bologna Italy
| | - Simone Bregaglio
- CREA – Council for Agricultural Research and Economics Research Centre for Agriculture and Environment Bologna Italy
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Feng W, Qi S, Heng Y, Zhou Y, Wu Y, Liu W, He L, Li X. Canopy Vegetation Indices from In situ Hyperspectral Data to Assess Plant Water Status of Winter Wheat under Powdery Mildew Stress. FRONTIERS IN PLANT SCIENCE 2017; 8:1219. [PMID: 28751904 PMCID: PMC5507954 DOI: 10.3389/fpls.2017.01219] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Accepted: 06/28/2017] [Indexed: 05/23/2023]
Abstract
Plant disease and pests influence the physiological state and restricts the healthy growth of crops. Physiological measurements are considered the most accurate way of assessing plant health status. In this paper, we researched the use of an in situ hyperspectral remote sensor to detect plant water status in winter wheat infected with powdery mildew. Using a diseased nursery field and artificially inoculated open field experiments, we detected the canopy spectra of wheat at different developmental stages and under different degrees of disease severity. At the same time, destructive sampling was carried out for physical tests to investigate the change of physiological parameters under the condition of disease. Selected vegetation indices (VIs) were mostly comprised of green bands, and correlation coefficients between these common VIs and plant water content (PWC) were generally 0.784-0.902 (p < 0.001), indicating the green waveband may have great potential in the evaluation of water content of winter wheat under powdery mildew stress. The Photochemical Reflectance Index (PRI) was sensitive to physiological response influenced by powdery mildew, and the relationships of PRI with chlorophyll content, the maximum quantum efficiency of PSII photochemistry (Fv/Fm), and the potential activity of PSII photochemistry (Fv/Fo) were good with R2 = 0.639, 0.833, 0.808, respectively. Linear regressions showed PRI demonstrated a steady relationship with PWC across different growth conditions, with R2 = 0.817 and RMSE = 2.17. The acquired PRI model of wheat under the powdery mildew stress has a good compatibility to different experimental fields from booting stage to filling stage compared with the traditional water signal vegetation indices, WBI, FWBI1, and FWBI2. The verification results with independent data showed that PRI still performed better with R2 = 0.819 between measured and predicted, and corresponding RE = 8.26%. Thus, PRI is recommended as a potentially reliable indicator of PWC in winter wheat with powdery mildew stress. The results will help to understand the physical state of the plant, and provide technical support for disease control using remote sensing during wheat production.
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Affiliation(s)
- Wei Feng
- State Key Laboratory of Wheat and Maize Crop Science, National Engineering Research Centre for Wheat, Henan Agricultural UniversityZhengzhou, China
- Collaborative Innovation Center of Henan Grain Crops, Henan Agricultural UniversityZhengzhou, China
| | - Shuangli Qi
- State Key Laboratory of Wheat and Maize Crop Science, National Engineering Research Centre for Wheat, Henan Agricultural UniversityZhengzhou, China
| | - Yarong Heng
- State Key Laboratory of Wheat and Maize Crop Science, National Engineering Research Centre for Wheat, Henan Agricultural UniversityZhengzhou, China
| | - Yi Zhou
- State Key Laboratory of Wheat and Maize Crop Science, National Engineering Research Centre for Wheat, Henan Agricultural UniversityZhengzhou, China
| | - Yapeng Wu
- State Key Laboratory of Wheat and Maize Crop Science, National Engineering Research Centre for Wheat, Henan Agricultural UniversityZhengzhou, China
| | - Wandai Liu
- State Key Laboratory of Wheat and Maize Crop Science, National Engineering Research Centre for Wheat, Henan Agricultural UniversityZhengzhou, China
- Collaborative Innovation Center of Henan Grain Crops, Henan Agricultural UniversityZhengzhou, China
| | - Li He
- State Key Laboratory of Wheat and Maize Crop Science, National Engineering Research Centre for Wheat, Henan Agricultural UniversityZhengzhou, China
- Collaborative Innovation Center of Henan Grain Crops, Henan Agricultural UniversityZhengzhou, China
| | - Xiao Li
- Collaborative Innovation Center of Henan Grain Crops, Henan Agricultural UniversityZhengzhou, China
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Esteve Agelet L, Hurburgh CR. Limitations and current applications of Near Infrared Spectroscopy for single seed analysis. Talanta 2014; 121:288-99. [PMID: 24607140 DOI: 10.1016/j.talanta.2013.12.038] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2013] [Revised: 12/15/2013] [Accepted: 12/16/2013] [Indexed: 11/28/2022]
Abstract
Near Infrared Spectroscopy (NIRS) analysis at the single seed level is a useful tool for breeders, farmers, feeding facilities, and food companies according to current researches. As a non-destructive technique, NIRS allows for the selection and classification of seeds according to specific traits and attributes without alteration of their properties. Critical aspects in using NIRS for single seed analysis such as reference method, sample morphology, and spectrometer suitability are discussed in this review. A summary of current applications of NIRS technologies at single seed level is also presented.
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Affiliation(s)
- Lidia Esteve Agelet
- Department of Agriculture and Biosystems Engineering, Iowa State University, USA.
| | - Charles R Hurburgh
- Department of Agriculture and Biosystems Engineering, Iowa State University, USA
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Liu Y, Ying Y. Noninvasive Method for Internal Quality Evaluation of Pear Fruit Using Fiber-Optic FT-NIR Spectrometry. INTERNATIONAL JOURNAL OF FOOD PROPERTIES 2007. [DOI: 10.1080/10942910601172042] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Shao Y, He Y, Bao Y. A New Approach to Predict Acidity of Bayberry Juice by Using Vis/Near Infrared Spectroscopy. INTERNATIONAL JOURNAL OF FOOD PROPERTIES 2007. [DOI: 10.1080/10942910601060858] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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He Y, Li X, Shao Y. Fast Discrimination of Apple Varieties Using Vis/NIR Spectroscopy. INTERNATIONAL JOURNAL OF FOOD PROPERTIES 2007. [DOI: 10.1080/10942910600575666] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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He Y, Wu D, Feng S, Li X. Fast Measurement of Sugar Content of Yogurt Using Vis/NIR-Spectroscopy. INTERNATIONAL JOURNAL OF FOOD PROPERTIES 2007. [DOI: 10.1080/10942910600575658] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Gürses M. Mycoflora and Aflatoxin Content of Hazelnuts, Walnuts, Peanuts, Almonds and Roasted Chickpeas (LEBLEBI) Sold in Turkey. INTERNATIONAL JOURNAL OF FOOD PROPERTIES 2006. [DOI: 10.1080/10942910600596597] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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