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Kaiser RI, Zhao L, Lu W, Ahmed M, Evseev MM, Azyazov VN, Mebel AM, Mohamed RK, Fischer FR, Li X. Gas-phase synthesis of racemic helicenes and their potential role in the enantiomeric enrichment of sugars and amino acids in meteorites. Phys Chem Chem Phys 2022; 24:25077-25087. [PMID: 36056687 DOI: 10.1039/d2cp03084e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The molecular origins of homochirality on Earth is not understood well, particularly how enantiomerically enriched molecules of astrobiological significance like sugars and amino acids might have been synthesized on icy grains in space preceding their delivery to Earth. Polycyclic aromatic hydrocarbons (PAHs) identified in carbonaceous chondrites could have been processed in molecular clouds by circularly polarized light prior to the depletion of enantiomerically enriched helicenes onto carbonaceous grains resulting in chiral islands. However, the fundamental low temperature reaction mechanisms leading to racemic helicenes are still unknown. Here, by exploiting synchrotron based molecular beam photoionization mass spectrometry combined with electronic structure calculations, we provide compelling testimony on barrierless, low temperature pathways leading to racemates of [5] and [6]helicene. Astrochemical modeling advocates that gas-phase reactions in molecular clouds lead to racemates of helicenes suggesting a pathway for future astronomical observation and providing a fundamental understanding for the origin of homochirality on early Earth.
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Affiliation(s)
- Ralf I Kaiser
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, Hawaii, 96822, USA.
| | - Long Zhao
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, Hawaii, 96822, USA.
| | - Wenchao Lu
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.
| | - Musahid Ahmed
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.
| | | | | | - Alexander M Mebel
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, USA.
| | - Rana K Mohamed
- Department of Chemistry, University of California, Berkeley, CA 94720, USA.,Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.,Kavli Energy Nano Sciences Institute at the University of California Berkeley and the Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - Felix R Fischer
- Department of Chemistry, University of California, Berkeley, CA 94720, USA.,Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.,Kavli Energy Nano Sciences Institute at the University of California Berkeley and the Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - Xiaohu Li
- Xinjiang Astronomical Observatory, Chinese Academy of Sciences, Urumqi, Xinjiang 830011, P. R. China.,Key Laboratory of Radio Astronomy, Chinese Academy of Sciences, Urumqi, Xinjiang 830011, P. R. China.
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3
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Enantiodifferent proton exchange in alanine and asparagine in the presence of H(2)(17)O. J Mol Evol 2010; 71:23-33. [PMID: 20593168 DOI: 10.1007/s00239-010-9361-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2009] [Accepted: 05/26/2010] [Indexed: 10/19/2022]
Abstract
Using Time Domain (1)H Nuclear Magnetic Resonance with H (2) (17) O (H (2) (17) O-TD-(1)HNMR), we found [H (2) (17) O]- and pH-controlled chiral differences in proton exchange properties in alanine (Ala) and asparagine (Asn). To minimize and equalize chemical impurities, Asn enantiomers were purified by crystallization from racemic solution. At <0.1 M H (2) (17) O, a shift in isoelectric pH (pI) occurred, approximately 1.14 kJ mol(-1) L: -D: -Asn DeltaDeltaG (o)' in the 5.91-6.42 pH range. One potential source for this asymmetry is the enantio-different magnetic moments (L: mu upward arrow not equal D: mu downward arrow) produced by neutral ring currents in the chiral center, leading to enantio-different nuclear spin organization and charge distribution in the amino group. At >or=pI, dissimilar interactions may occur in the hydration of the amino group with H (2) (17) O (NH(2)/H (2) (17) O not equal NH(2)/H (2) (16) O; NH(3) (+)/H (2) (17) O not equal NH(2)/H (2) (17) O; L: -*C-NH(2)/H (2) (17) O not equal D: -*C-NH(2)/H (2) (17) O). As L: mu upward arrow not equal D: mu downward arrow, the L: -*C-amino and the D: -*C-amino groups are diastereo spin-isomers. The nuclear spin of (17)O may be parallel or antiparallel with the ortho-(1)H(1)H pair; hence two ortho-H (2) (17) O molecules exist, also diastereo spin-isomers. As the pK of H (2) (17) O is different from H (2) (16) O, dissimilarities between L: -*C- and D: -*C-amino groups are converted into proton exchange differences. During H (2) (17) O-TD-(1)HNMR, the H (2) (17) O molecule is a "probe" of the state of the amino group. Regarding prebiotic evolution: prebiotic chirality may not require stochastic symmetry breaking or preexisting chiral conditions; chemical chiral effects due to L: mu upward arrow not equal D: mu downward arrow are small and need chiral amplification to generate an enantiomeric excess significant for prebiotic evolution; and prebiotic symmetry breaking was homochiral because the effect of L: mu upward arrow and D: mu downward arrow on the amino group should be similar in all alpha amino acids.
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Popa R, Cimpoiaşu VM, Scorei RI. Rooting prebiotic chirality in spinomeric chemistry? ASTROBIOLOGY 2009; 9:697-701. [PMID: 19845442 DOI: 10.1089/ast.2009.0346] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Spinomeric chemistry is a domain of physical chemistry that explores the role of spin-isomery in chemical reactivity. In large magnetic fields (B), chemical structures with three adjacent nuclear spins (such as H(2)(17)O, H(2)(33)S,-NH(2), and and -(13)CH(2)-) form complex spinomers. Known departure from a 1:1 ratio between various types of spinomers opens interesting research avenues in their potential role in asymmetric hydration processes. Recent time domain (1)H nuclear magnetic resonance (TD-(1)HNMR) findings revealed the existence of small, yet consistent, H(2)(17)O-controlled enantio-different proton exchange reactivity in sugars. The mechanisms behind this effect are unclear and may involve spinomer/enantiocenter (e.g., H(2)(17)O/*C) interactions or spinomer/spinomer (e.g., H(2)(17)O/-NH(2)) interactions. We developed an experimental model that allows for the verification and study of such effects. We used TD-(1)HNMR at 0.589 T to study and compare proton exchange enantio-differences in asparagine (Asn) and mandelic acid in response to titration with H(2)(17)O at constant pH. Unlike Asn, mandelic acid has no complex spinomer group (such as -NH(2)) in its chiral center. We report finding enantio-differences regarding DeltapK and 1/T(2)(0) correlated with H(2)(17)O, and linear changes in DeltaM(2) indicating differences in the affinity of enantiomers for H(2)(17)O surface hydration. These results stress the importance of H(2)(17)O-based spinomeric chemistry in chiral reactivity and open windows toward a novel interpretation of the origin of prebiotic chiral reactivity in the presence of moderately large B (such as on magnetic mineral surfaces or on satellites of gaseous giants), as well as toward abiotic isotopic fractionation of H(2)(17)O in the presence of chiral organic molecules.
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Affiliation(s)
- Radu Popa
- Portland State University, Portland, Oregon 97201, USA.
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Warmflash D, Chu H, Siefert J, Fox GE. Life detection using glucose and tetrasaccharide enantiomer pairs. ASTROBIOLOGY 2009; 9:297-303. [PMID: 19499996 DOI: 10.1089/ast.2008.0292] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
A life-detection system based on the expectation that any viable organism will utilize stereoisomers of a given compound asymmetrically is examined. Aqueous extracts of common soil, Mars regolith simulant JSC Mars-1, and suspensions of E. coli and S. cerevisiae were incubated with stereoisomer pairs. The enantiomeric pairs were either D- and L-glucose or a pair of chiral tetrasaccharides. Following an incubation period of 10 days, stereoisomeric selectivity is detectable with the glucose pair by mass spectrometry in extracts made from soil at 0.5 g/ml, in extracts made from JSC Mars-1 at 2.5 g/ml, and in cell suspensions down to 1.0 x 10(7) cells/ml. For the tetrasaccharide pair, stereoisomeric selectivity was detected in extracts made from 0.5 g/ml or more of common soil but not in JSC Mars-1 simulant. The effective sensitivity in extracts was 2.5 x 10(7) cells/ml or better for the glucose pair and 5.0 x 10(8) cells/ml or better for the tetrasaccharide pair. The sensitivity of the glucose pair was such that it could detect life in samples that would be found to be devoid of organic matter by the GCMS system carried by the Viking landers. The results demonstrate the utility of the approach in the search for biological activity on Mars. However, sensitivity is a function of the enantiomer pair used, and this might also be different for hypothetical martian organisms. Therefore, it will be necessary to characterize additional stereoisomeric pairs and, ultimately, to include several in a single test environment.
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Affiliation(s)
- David Warmflash
- Department of Biology and Biochemistry, University of Houston, Houston, Texas 77204-5001, USA
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Shinitzky M, Deamer D. Comments in a discussion: differential rates of D- and L-tyrosine crystallization. ORIGINS LIFE EVOL B 2008; 38:271-5. [PMID: 18351439 DOI: 10.1007/s11084-008-9129-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2007] [Accepted: 02/09/2008] [Indexed: 11/26/2022]
Abstract
We earlier reported that we had observed quantifiable differences in crystallization rates of D and L tyrosine. It has been suggested that these results were due to the presence of impurities. Here we argue that it is premature to conclude that impurities entirely explain the results. More generally, there is an accumulating weight of evidence that D and L enantiomers display unexpected differences in their physical properties and behavior. These should be taken into account as we attempt to understand the origin of biochirality.
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Affiliation(s)
- Meir Shinitzky
- Department of Biochemistry, Weizmann Institute, Rehovot, Israel
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