1
|
Wallace ML, Tallarida N, Schubert WW, Lambert J. Life Detection on Icy Moons Using Flow Cytometry and Exogenous Fluorescent Stains. ASTROBIOLOGY 2023; 23:1071-1082. [PMID: 37672625 DOI: 10.1089/ast.2023.0016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/08/2023]
Abstract
Flow cytometry is a potential technology for in situ life detection on icy moons (such as Enceladus and Europa) and on the polar ice caps of Mars. We developed a method for using flow cytometry to positively identify four classes of biomarkers using exogenous fluorescent stains: nucleic acids, proteins, carbohydrates, and lipids. We demonstrated the effectiveness of exogenous stains with six known organisms and known abiotic material and showed that the cytometer is easily able to distinguish between the known organisms and the known abiotic material using the exogenous stains. To simulate a life-detection experiment on an icy world lander, we used six natural samples with unknown biotic and abiotic content. We showed that flow cytometry can identify all four biomarkers using the exogenous stains and can separate the biotic material from the known abiotic material on scatter plots. Exogenous staining techniques would likely be used in conjunction with intrinsic fluorescence, clustering, and sorting for a more complete and capable life-detection instrument on an icy moon lander.
Collapse
Affiliation(s)
- Matthew L Wallace
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
| | - Nicholas Tallarida
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
| | - Wayne W Schubert
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
| | - James Lambert
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
| |
Collapse
|
2
|
Špaček J, Benner SA. Agnostic Life Finder (ALF) for Large-Scale Screening of Martian Life During In Situ Refueling. ASTROBIOLOGY 2022; 22:1255-1263. [PMID: 35796703 DOI: 10.1089/ast.2021.0070] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Before the first humans depart for Mars in the next decade, hundreds of tons of martian water-ice must be harvested to produce propellant for the return vehicle, a process known as in situ resource utilization (ISRU). We describe here an instrument, the Agnostic Life Finder (ALF), that is an inexpensive life-detection add-on to ISRU. ALF exploits a well-supported view that informational genetic biopolymers in life in water must have two structural features: (1) Informational biopolymers must carry a repeating charge; they must be polyelectrolytes. (2) Their building blocks must fit into an aperiodic crystal structure; the building blocks must be size-shape regular. ALF exploits the first structural feature to extract polyelectrolytes from ∼10 cubic meters of mined martian water by applying a voltage gradient perpendicularly to the water's flow. This gradient diverts polyelectrolytes from the flow toward their respective electrodes (polyanions to the anode, polycations to the cathode), where they are captured in cartridges before they encounter the electrodes. There, they can later be released to analyze their building blocks, for example, by mass spectrometry or nanopore. Upstream, martian cells holding martian informational polyelectrolytes are disrupted by ultrasound. To manage the (unknown) conductivity of the water due to the presence of salts, the mined water is preconditioned by electrodialysis using porous membranes. ALF uses only resources and technology that must already be available for ISRU. Thus, life detection is easily and inexpensively integrated into SpaceX or NASA ISRU missions.
Collapse
Affiliation(s)
- Jan Špaček
- Firebird Biomolecular Sciences, LLC, Alachua, Florida, USA
| | | |
Collapse
|
3
|
Tulej M, Neubeck A, Riedo A, Lukmanov R, Grimaudo V, Ligterink NFW, Ivarsson M, Bach W, de Koning C, Wurz P. Isotope abundance ratio measurements using femtosecond laser ablation ionization mass spectrometry. JOURNAL OF MASS SPECTROMETRY : JMS 2020; 55:e4660. [PMID: 33006261 DOI: 10.1002/jms.4660] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 09/07/2020] [Accepted: 09/15/2020] [Indexed: 06/11/2023]
Abstract
Accurate isotope ratio measurements are of high importance in various scientific fields, ranging from radio isotope geochronology of solids to studies of element isotopes fractionated by living organisms. Instrument limitations, such as unresolved isobaric inferences in the mass spectra, or cosampling of the material of interest together with the matrix material may reduce the quality of isotope measurements. Here, we describe a method for accurate isotope ratio measurements using our laser ablation ionization time-of-flight mass spectrometer (LIMS) that is designed for in situ planetary research. The method is based on chemical depth profiling that allows for identifying micrometer scale inclusions embedded in surrounding rocks with different composition inside the bulk of the sample. The data used for precise isotope measurements are improved using a spectrum cleaning procedure that ensures removal of low quality spectra. Furthermore, correlation of isotopes of an element is used to identify and reject the data points that, for example, do not belong to the species of interest. The measurements were conducted using IR femtosecond laser irradiation focused on the sample surface to a spot size of ~12 μm. Material removal was conducted for a predefined number of laser shots, and time-of-flight mass spectra were recorded for each of the ablated layers. Measurements were conducted on NIST SRM 986 Ni isotope standard, trevorite mineral, and micrometer-sized inclusions embedded in aragonite. Our measurements demonstrate that element isotope ratios can be measured with accuracies and precision at the permille level, exemplified by the analysis of B, Mg, and Ni element isotopes. The method applied will be used for in situ investigation of samples on planetary surfaces, for accurate quantification of element fractionation induced by, for example, past or present life or by geochemical processes.
Collapse
Affiliation(s)
- Marek Tulej
- Physics Institute, Space Research and Planetary Sciences, University of Bern, Bern, Switzerland
| | - Anna Neubeck
- Department of Geological Sciences, Uppsala University, Uppsala, Sweden
| | - Andreas Riedo
- Physics Institute, Space Research and Planetary Sciences, University of Bern, Bern, Switzerland
| | - Rustam Lukmanov
- Physics Institute, Space Research and Planetary Sciences, University of Bern, Bern, Switzerland
| | - Valentine Grimaudo
- Physics Institute, Space Research and Planetary Sciences, University of Bern, Bern, Switzerland
| | | | - Magnus Ivarsson
- Department of Biology, University of Southern Denmark, Odense, Denmark
- Department of Paleobiology, Swedish Museum of Natural History, Stockholm, Sweden
| | - Wolfgang Bach
- Department of Geosciences, University of Bremen, Bremen, Germany
| | - Coenraad de Koning
- Physics Institute, Space Research and Planetary Sciences, University of Bern, Bern, Switzerland
| | - Peter Wurz
- Physics Institute, Space Research and Planetary Sciences, University of Bern, Bern, Switzerland
| |
Collapse
|
4
|
Sandford SA, Nuevo M, Bera PP, Lee TJ. Prebiotic Astrochemistry and the Formation of Molecules of Astrobiological Interest in Interstellar Clouds and Protostellar Disks. Chem Rev 2020; 120:4616-4659. [DOI: 10.1021/acs.chemrev.9b00560] [Citation(s) in RCA: 71] [Impact Index Per Article: 17.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Scott A. Sandford
- NASA Ames Research Center, MS 245-6, Moffett Field, California 94035, United States
| | - Michel Nuevo
- NASA Ames Research Center, MS 245-6, Moffett Field, California 94035, United States
- BAER Institute, NASA Research Park, MS 18-4, Moffett Field, California 94035, United States
| | - Partha P. Bera
- NASA Ames Research Center, MS 245-6, Moffett Field, California 94035, United States
- BAER Institute, NASA Research Park, MS 18-4, Moffett Field, California 94035, United States
| | - Timothy J. Lee
- NASA Ames Research Center, MS 245-3, Moffett Field, California 94035, United States
| |
Collapse
|
5
|
Wiesendanger R, Wacey D, Tulej M, Neubeck A, Ivarsson M, Grimaudo V, Moreno-García P, Cedeño-López A, Riedo A, Wurz P. Chemical and Optical Identification of Micrometer-Sized 1.9 Billion-Year-Old Fossils by Combining a Miniature Laser Ablation Ionization Mass Spectrometry System with an Optical Microscope. ASTROBIOLOGY 2018; 18:1071-1080. [PMID: 30095994 DOI: 10.1089/ast.2017.1780] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
The recognition of biosignatures on planetary bodies requires the analysis of the putative microfossil with a set of complementary analytical techniques. This includes localized elemental and isotopic analysis of both, the putative microfossil and its surrounding host matrix. If the analysis can be performed with spatial resolution at the micrometer level and ppm detection sensitivities, valuable information on the (bio)chemical and physical processes that influenced the sample material can be gained. Our miniaturized laser ablation ionization mass spectrometry (LIMS)-time-of-flight mass spectrometer instrument is a valid candidate for performing the required chemical analysis in situ. However, up until now it was limited by the spatial accuracy of the sampling. In this contribution, we introduce a newly developed microscope system with micrometer accuracy for Ultra High Vacuum application, which allows a significant increase in the measurement capabilities of our miniature LIMS system. The new enhancement allows identification and efficient and accurate sampling of features of micrometer-sized fossils in a host matrix. The performance of our system is demonstrated by the identification and chemical analysis of signatures of micrometer-sized fossil structures in the 1.9 billion-year-old Gunflint chert.
Collapse
Affiliation(s)
- Reto Wiesendanger
- 1 Space Research and Planetary Sciences, Physics Institute, University of Bern, Bern, Switzerland
- 2 Microsystems for Space Technologies Laboratory, Ecole Polytechnique Fédérale, Lausanne, Neuchâtel, Switzerland
| | - David Wacey
- 3 Centre for Microscopy Characterisation and Analysis, The University of Western Australia, Perth, Australia
| | - Marek Tulej
- 1 Space Research and Planetary Sciences, Physics Institute, University of Bern, Bern, Switzerland
| | - Anna Neubeck
- 4 Department of Geological Sciences, Stockholm University, Stockholm, Sweden
| | - Magnus Ivarsson
- 5 Department of Paleobiology, Nordic Centre for Earth Evolution, Swedish Museum of Natural History, Stockholm, Sweden
- 6 Department of Biology, University of Southern Denmark, Odense, Denmark
| | - Valentine Grimaudo
- 7 Department of Chemistry and Biochemistry, Interfacial Electrochemistry Group, University of Bern , Bern, Switzerland
| | - Pavel Moreno-García
- 7 Department of Chemistry and Biochemistry, Interfacial Electrochemistry Group, University of Bern , Bern, Switzerland
| | - Alena Cedeño-López
- 7 Department of Chemistry and Biochemistry, Interfacial Electrochemistry Group, University of Bern , Bern, Switzerland
| | - Andreas Riedo
- 8 Sackler Laboratory for Astrophysics, Leiden Observatory, Leiden University , The Netherlands
| | - Peter Wurz
- 1 Space Research and Planetary Sciences, Physics Institute, University of Bern, Bern, Switzerland
| |
Collapse
|